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1.4.2-pre-58353fd273.log
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1.4.2-pre-58353fd273.log
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Julia Version 1.4.2-pre.13
Commit 58353fd273 (2020-05-10 17:03 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed ZipFile ────────────────────── v0.9.1
Installed Arpack ─────────────────────── v0.4.0
Installed SpecialFunctions ───────────── v0.10.0
Installed XLSX ───────────────────────── v0.6.2
Installed FCSFiles ───────────────────── v0.1.2
Installed OrderedCollections ─────────── v1.2.0
Installed Tables ─────────────────────── v1.0.4
Installed GigaSOM ────────────────────── v0.4.2
Installed TableTraits ────────────────── v1.0.0
Installed Parsers ────────────────────── v1.0.3
Installed Reexport ───────────────────── v0.2.0
Installed IteratorInterfaceExtensions ── v1.0.0
Installed FilePathsBase ──────────────── v0.7.0
Installed DataAPI ────────────────────── v1.3.0
Installed PDMats ─────────────────────── v0.9.12
Installed Distances ──────────────────── v0.8.2
Installed OpenBLAS_jll ───────────────── v0.3.9+4
Installed Missings ───────────────────── v0.4.3
Installed Arpack_jll ─────────────────── v3.5.0+3
Installed Zlib_jll ───────────────────── v1.2.11+9
Installed Rmath ──────────────────────── v0.6.1
Installed NearestNeighbors ───────────── v0.4.4
Installed FileIO ─────────────────────── v1.3.0
Installed CategoricalArrays ──────────── v0.7.7
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed PooledArrays ───────────────── v0.5.3
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed SortingAlgorithms ──────────── v0.3.1
Installed Compat ─────────────────────── v3.9.1
Installed StatsFuns ──────────────────── v0.9.4
Installed DataValueInterfaces ────────── v1.0.0
Installed EzXML ──────────────────────── v1.1.0
Installed DataStructures ─────────────── v0.17.15
Installed XML2_jll ───────────────────── v2.9.9+4
Installed InvertedIndices ────────────── v1.0.0
Installed Rmath_jll ──────────────────── v0.2.2+0
Installed Primes ─────────────────────── v0.4.0
Installed QuadGK ─────────────────────── v2.3.1
Installed DistributedArrays ──────────── v0.6.4
Installed JSON ───────────────────────── v0.21.0
Installed Libiconv_jll ───────────────── v1.16.0+2
Installed StatsBase ──────────────────── v0.33.0
Installed WeakRefStrings ─────────────── v0.6.2
Installed FillArrays ─────────────────── v0.8.9
Installed CSV ────────────────────────── v0.6.1
Installed StaticArrays ───────────────── v0.12.3
Installed DataFrames ─────────────────── v0.20.2
Installed Distributions ──────────────── v0.23.2
Updating `~/.julia/environments/v1.4/Project.toml`
[a03a9c34] + GigaSOM v0.4.2
Updating `~/.julia/environments/v1.4/Manifest.toml`
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+3
[336ed68f] + CSV v0.6.1
[324d7699] + CategoricalArrays v0.7.7
[34da2185] + Compat v3.9.1
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] + DataAPI v1.3.0
[a93c6f00] + DataFrames v0.20.2
[864edb3b] + DataStructures v0.17.15
[e2d170a0] + DataValueInterfaces v1.0.0
[b4f34e82] + Distances v0.8.2
[aaf54ef3] + DistributedArrays v0.6.4
[31c24e10] + Distributions v0.23.2
[8f5d6c58] + EzXML v1.1.0
[d76558cf] + FCSFiles v0.1.2
[5789e2e9] + FileIO v1.3.0
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.9
[a03a9c34] + GigaSOM v0.4.2
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[94ce4f54] + Libiconv_jll v1.16.0+2
[e1d29d7a] + Missings v0.4.3
[b8a86587] + NearestNeighbors v0.4.4
[4536629a] + OpenBLAS_jll v0.3.9+4
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[bac558e1] + OrderedCollections v1.2.0
[90014a1f] + PDMats v0.9.12
[69de0a69] + Parsers v1.0.3
[2dfb63ee] + PooledArrays v0.5.3
[27ebfcd6] + Primes v0.4.0
[1fd47b50] + QuadGK v2.3.1
[189a3867] + Reexport v0.2.0
[79098fc4] + Rmath v0.6.1
[f50d1b31] + Rmath_jll v0.2.2+0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.10.0
[90137ffa] + StaticArrays v0.12.3
[2913bbd2] + StatsBase v0.33.0
[4c63d2b9] + StatsFuns v0.9.4
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.0.4
[ea10d353] + WeakRefStrings v0.6.2
[fdbf4ff8] + XLSX v0.6.2
[02c8fc9c] + XML2_jll v2.9.9+4
[a5390f91] + ZipFile v0.9.1
[83775a58] + Zlib_jll v1.2.11+9
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing GigaSOM
Status `/tmp/jl_KDtoju/Manifest.toml`
[7d9fca2a] Arpack v0.4.0
[68821587] Arpack_jll v3.5.0+3
[336ed68f] CSV v0.6.1
[324d7699] CategoricalArrays v0.7.7
[34da2185] Compat v3.9.1
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.20.2
[864edb3b] DataStructures v0.17.15
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[aaf54ef3] DistributedArrays v0.6.4
[31c24e10] Distributions v0.23.2
[8f5d6c58] EzXML v1.1.0
[d76558cf] FCSFiles v0.1.2
[5789e2e9] FileIO v1.3.0
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.9
[a03a9c34] GigaSOM v0.4.2
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[94ce4f54] Libiconv_jll v1.16.0+2
[e1d29d7a] Missings v0.4.3
[b8a86587] NearestNeighbors v0.4.4
[4536629a] OpenBLAS_jll v0.3.9+4
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[bac558e1] OrderedCollections v1.2.0
[90014a1f] PDMats v0.9.12
[69de0a69] Parsers v1.0.3
[2dfb63ee] PooledArrays v0.5.3
[27ebfcd6] Primes v0.4.0
[1fd47b50] QuadGK v2.3.1
[189a3867] Reexport v0.2.0
[79098fc4] Rmath v0.6.1
[f50d1b31] Rmath_jll v0.2.2+0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.0
[90137ffa] StaticArrays v0.12.3
[2913bbd2] StatsBase v0.33.0
[4c63d2b9] StatsFuns v0.9.4
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.0.4
[ea10d353] WeakRefStrings v0.6.2
[fdbf4ff8] XLSX v0.6.2
[02c8fc9c] XML2_jll v2.9.9+4
[a5390f91] ZipFile v0.9.1
[83775a58] Zlib_jll v1.2.11+9
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Archive: PBMC8_fcs_files.zip
inflating: PBMC8_30min_patient1_BCR-XL.fcs
inflating: PBMC8_30min_patient1_Reference.fcs
inflating: PBMC8_30min_patient2_BCR-XL.fcs
inflating: PBMC8_30min_patient2_Reference.fcs
inflating: PBMC8_30min_patient3_BCR-XL.fcs
inflating: PBMC8_30min_patient3_Reference.fcs
inflating: PBMC8_30min_patient4_BCR-XL.fcs
inflating: PBMC8_30min_patient4_Reference.fcs
inflating: PBMC8_30min_patient5_BCR-XL.fcs
inflating: PBMC8_30min_patient5_Reference.fcs
inflating: PBMC8_30min_patient6_BCR-XL.fcs
inflating: PBMC8_30min_patient6_Reference.fcs
inflating: PBMC8_30min_patient7_BCR-XL.fcs
inflating: PBMC8_30min_patient7_Reference.fcs
inflating: PBMC8_30min_patient8_BCR-XL.fcs
inflating: PBMC8_30min_patient8_Reference.fcs
Test Summary: | Pass Total
GigaSOM test suite | 127 127
Testing GigaSOM tests passed