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1.5.0-DEV-4085873ec6.log
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Julia Version 1.5.0-DEV.431
Commit 4085873ec6 (2020-03-10 23:48 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed RecursiveFactorization ─────── v0.1.0
Installed AbstractFFTs ───────────────── v0.5.0
Installed CommonSubexpressions ───────── v0.2.0
Installed TableTraits ────────────────── v1.0.0
Installed DiffRules ──────────────────── v1.0.1
Installed Polynomials ────────────────── v0.6.1
Installed ChaosTools ─────────────────── v1.9.0
Installed FillArrays ─────────────────── v0.8.5
Installed Requires ───────────────────── v1.0.1
Installed CompilerSupportLibraries_jll ─ v0.2.0+1
Installed Rmath_jll ──────────────────── v0.2.2+0
Installed Reexport ───────────────────── v0.2.0
Installed SpecialFunctions ───────────── v0.9.0
Installed Arpack ─────────────────────── v0.4.0
Installed StaticArrays ───────────────── v0.12.1
Installed IterativeSolvers ───────────── v0.8.1
Installed QuadGK ─────────────────────── v2.3.1
Installed SortingAlgorithms ──────────── v0.3.1
Installed MKL_jll ────────────────────── v2019.0.117+2
Installed ZygoteRules ────────────────── v0.2.0
Installed DataAPI ────────────────────── v1.1.0
Installed Roots ──────────────────────── v1.0.0
Installed StatsFuns ──────────────────── v0.9.4
Installed LombScargle ────────────────── v0.5.0
Installed DataStructures ─────────────── v0.17.10
Installed MacroTools ─────────────────── v0.5.4
Installed PDMats ─────────────────────── v0.9.11
Installed MuladdMacro ────────────────── v0.2.2
Installed TreeViews ──────────────────── v0.3.0
Installed RecipesBase ────────────────── v0.8.0
Installed Parameters ─────────────────── v0.12.0
Installed FFTW ───────────────────────── v1.2.0
Installed Measurements ───────────────── v2.1.1
Installed OrderedCollections ─────────── v1.1.0
Installed OpenBLAS_jll ───────────────── v0.3.7+7
Installed Arpack_jll ─────────────────── v3.5.0+2
Installed Missings ───────────────────── v0.4.3
Installed DelayEmbeddings ────────────── v1.3.1
Installed Distributions ──────────────── v0.22.5
Installed DocStringExtensions ────────── v0.8.1
Installed Calculus ───────────────────── v0.5.1
Installed DiffEqBase ─────────────────── v6.19.0
Installed FFTW_jll ───────────────────── v3.3.9+4
Installed Combinatorics ──────────────── v1.0.0
Installed Distances ──────────────────── v0.8.2
Installed DiffResults ────────────────── v1.0.2
Installed IntelOpenMP_jll ────────────── v2018.0.3+0
Installed DynamicalSystemsBase ───────── v1.5.3
Installed ChainRulesCore ─────────────── v0.7.1
Installed StatsBase ──────────────────── v0.32.2
Installed FunctionWrappers ───────────── v1.1.1
Installed ArrayInterface ─────────────── v2.5.1
Installed IteratorInterfaceExtensions ── v1.0.0
Installed NaNMath ────────────────────── v0.3.3
Installed NearestNeighbors ───────────── v0.4.4
Installed RecursiveArrayTools ────────── v2.1.0
Installed SimpleDiffEq ───────────────── v1.1.0
Installed Rmath ──────────────────────── v0.6.1
Installed IterTools ──────────────────── v1.3.0
Installed DSP ────────────────────────── v0.6.3
Installed ForwardDiff ────────────────── v0.10.9
#=#=# ############### 21.1%######################################################################## 100.0%
#=#=# ## 3.1%###### 9.1%########### 15.8%################## 25.9%########################## 37.4%###################################### 53.6%#################################################### 73.0%###################################################################### 97.8%######################################################################## 100.0%
#=#=# ########################################################### 82.9%######################################################################## 100.0%
#=#=# ##O#- # ##O=# # ## 3.8%########## 14.4%############# 19.4%############### 21.2%######################### 35.8%################################ 44.9%########################################### 60.1%######################################################### 79.4%##################################################################### 96.7%######################################################################## 100.0%
#=#=# ####################### 32.7%######################################################################## 100.0%
#=#=# ### 4.4%################################################ 67.7%######################################################################## 100.0%
#=#=# ###################################################### 75.9%######################################################################## 100.0%
Updating `~/.julia/environments/v1.5/Project.toml`
608a59af + ChaosTools v1.9.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
621f4979 + AbstractFFTs v0.5.0
7d9fca2a + Arpack v0.4.0
68821587 + Arpack_jll v3.5.0+2
4fba245c + ArrayInterface v2.5.1
49dc2e85 + Calculus v0.5.1
d360d2e6 + ChainRulesCore v0.7.1
608a59af + ChaosTools v1.9.0
861a8166 + Combinatorics v1.0.0
bbf7d656 + CommonSubexpressions v0.2.0
e66e0078 + CompilerSupportLibraries_jll v0.2.0+1
717857b8 + DSP v0.6.3
9a962f9c + DataAPI v1.1.0
864edb3b + DataStructures v0.17.10
5732040d + DelayEmbeddings v1.3.1
2b5f629d + DiffEqBase v6.19.0
163ba53b + DiffResults v1.0.2
b552c78f + DiffRules v1.0.1
b4f34e82 + Distances v0.8.2
31c24e10 + Distributions v0.22.5
ffbed154 + DocStringExtensions v0.8.1
6e36e845 + DynamicalSystemsBase v1.5.3
7a1cc6ca + FFTW v1.2.0
f5851436 + FFTW_jll v3.3.9+4
1a297f60 + FillArrays v0.8.5
f6369f11 + ForwardDiff v0.10.9
069b7b12 + FunctionWrappers v1.1.1
1d5cc7b8 + IntelOpenMP_jll v2018.0.3+0
c8e1da08 + IterTools v1.3.0
42fd0dbc + IterativeSolvers v0.8.1
82899510 + IteratorInterfaceExtensions v1.0.0
fc60dff9 + LombScargle v0.5.0
856f044c + MKL_jll v2019.0.117+2
1914dd2f + MacroTools v0.5.4
eff96d63 + Measurements v2.1.1
e1d29d7a + Missings v0.4.3
46d2c3a1 + MuladdMacro v0.2.2
77ba4419 + NaNMath v0.3.3
b8a86587 + NearestNeighbors v0.4.4
4536629a + OpenBLAS_jll v0.3.7+7
efe28fd5 + OpenSpecFun_jll v0.5.3+3
bac558e1 + OrderedCollections v1.1.0
90014a1f + PDMats v0.9.11
d96e819e + Parameters v0.12.0
f27b6e38 + Polynomials v0.6.1
1fd47b50 + QuadGK v2.3.1
3cdcf5f2 + RecipesBase v0.8.0
731186ca + RecursiveArrayTools v2.1.0
f2c3362d + RecursiveFactorization v0.1.0
189a3867 + Reexport v0.2.0
ae029012 + Requires v1.0.1
79098fc4 + Rmath v0.6.1
f50d1b31 + Rmath_jll v0.2.2+0
f2b01f46 + Roots v1.0.0
05bca326 + SimpleDiffEq v1.1.0
a2af1166 + SortingAlgorithms v0.3.1
276daf66 + SpecialFunctions v0.9.0
90137ffa + StaticArrays v0.12.1
2913bbd2 + StatsBase v0.32.2
4c63d2b9 + StatsFuns v0.9.4
3783bdb8 + TableTraits v1.0.0
a2a6695c + TreeViews v0.3.0
700de1a5 + ZygoteRules v0.2.0
2a0f44e3 + Base64
ade2ca70 + Dates
8ba89e20 + Distributed
b77e0a4c + InteractiveUtils
76f85450 + LibGit2
8f399da3 + Libdl
37e2e46d + LinearAlgebra
56ddb016 + Logging
d6f4376e + Markdown
44cfe95a + Pkg
de0858da + Printf
3fa0cd96 + REPL
9a3f8284 + Random
ea8e919c + SHA
9e88b42a + Serialization
6462fe0b + Sockets
2f01184e + SparseArrays
10745b16 + Statistics
4607b0f0 + SuiteSparse
8dfed614 + Test
cf7118a7 + UUIDs
4ec0a83e + Unicode
Building FFTW → `~/.julia/packages/FFTW/qqcBj/deps/build.log`
Testing ChaosTools
Status `/tmp/jl_EsAMm8/Project.toml`
608a59af ChaosTools v1.9.0
861a8166 Combinatorics v1.0.0
717857b8 DSP v0.6.3
2b5f629d DiffEqBase v6.19.0
b4f34e82 Distances v0.8.2
31c24e10 Distributions v0.22.5
6e36e845 DynamicalSystemsBase v1.5.3
f6369f11 ForwardDiff v0.10.9
fc60dff9 LombScargle v0.5.0
2fda8390 LsqFit v0.10.0
b8a86587 NearestNeighbors v0.4.4
1dea7af3 OrdinaryDiffEq v5.29.0
189a3867 Reexport v0.2.0
f2b01f46 Roots v1.0.0
90137ffa StaticArrays v0.12.1
2913bbd2 StatsBase v0.32.2
37e2e46d LinearAlgebra
9a3f8284 Random
10745b16 Statistics
8dfed614 Test
Status `/tmp/jl_EsAMm8/Manifest.toml`
621f4979 AbstractFFTs v0.5.0
79e6a3ab Adapt v1.0.1
ec485272 ArnoldiMethod v0.0.4
7d9fca2a Arpack v0.4.0
68821587 Arpack_jll v3.5.0+2
4fba245c ArrayInterface v2.5.1
49dc2e85 Calculus v0.5.1
d360d2e6 ChainRulesCore v0.7.1
608a59af ChaosTools v1.9.0
861a8166 Combinatorics v1.0.0
bbf7d656 CommonSubexpressions v0.2.0
34da2185 Compat v2.2.0
e66e0078 CompilerSupportLibraries_jll v0.2.0+1
717857b8 DSP v0.6.3
9a962f9c DataAPI v1.1.0
864edb3b DataStructures v0.17.10
5732040d DelayEmbeddings v1.3.1
2b5f629d DiffEqBase v6.19.0
163ba53b DiffResults v1.0.2
b552c78f DiffRules v1.0.1
b4f34e82 Distances v0.8.2
31c24e10 Distributions v0.22.5
ffbed154 DocStringExtensions v0.8.1
6e36e845 DynamicalSystemsBase v1.5.3
d4d017d3 ExponentialUtilities v1.6.0
7a1cc6ca FFTW v1.2.0
f5851436 FFTW_jll v3.3.9+4
1a297f60 FillArrays v0.8.5
6a86dc24 FiniteDiff v2.2.1
f6369f11 ForwardDiff v0.10.9
069b7b12 FunctionWrappers v1.1.1
01680d73 GenericSVD v0.2.2
d25df0c9 Inflate v0.1.1
1d5cc7b8 IntelOpenMP_jll v2018.0.3+0
c8e1da08 IterTools v1.3.0
42fd0dbc IterativeSolvers v0.8.1
82899510 IteratorInterfaceExtensions v1.0.0
093fc24a LightGraphs v1.3.1
fc60dff9 LombScargle v0.5.0
2fda8390 LsqFit v0.10.0
856f044c MKL_jll v2019.0.117+2
1914dd2f MacroTools v0.5.4
eff96d63 Measurements v2.1.1
e1d29d7a Missings v0.4.3
46d2c3a1 MuladdMacro v0.2.2
d41bc354 NLSolversBase v7.6.1
77ba4419 NaNMath v0.3.3
b8a86587 NearestNeighbors v0.4.4
4536629a OpenBLAS_jll v0.3.7+7
efe28fd5 OpenSpecFun_jll v0.5.3+3
87e2bd06 OptimBase v2.0.0
bac558e1 OrderedCollections v1.1.0
1dea7af3 OrdinaryDiffEq v5.29.0
90014a1f PDMats v0.9.11
d96e819e Parameters v0.12.0
f27b6e38 Polynomials v0.6.1
1fd47b50 QuadGK v2.3.1
3cdcf5f2 RecipesBase v0.8.0
731186ca RecursiveArrayTools v2.1.0
f2c3362d RecursiveFactorization v0.1.0
189a3867 Reexport v0.2.0
ae029012 Requires v1.0.1
79098fc4 Rmath v0.6.1
f50d1b31 Rmath_jll v0.2.2+0
f2b01f46 Roots v1.0.0
05bca326 SimpleDiffEq v1.1.0
699a6c99 SimpleTraits v0.9.1
a2af1166 SortingAlgorithms v0.3.1
47a9eef4 SparseDiffTools v1.4.0
276daf66 SpecialFunctions v0.9.0
90137ffa StaticArrays v0.12.1
2913bbd2 StatsBase v0.32.2
4c63d2b9 StatsFuns v0.9.4
3783bdb8 TableTraits v1.0.0
a2a6695c TreeViews v0.3.0
19fa3120 VertexSafeGraphs v0.1.1
700de1a5 ZygoteRules v0.2.0
2a0f44e3 Base64
ade2ca70 Dates
8bb1440f DelimitedFiles
8ba89e20 Distributed
b77e0a4c InteractiveUtils
76f85450 LibGit2
8f399da3 Libdl
37e2e46d LinearAlgebra
56ddb016 Logging
d6f4376e Markdown
a63ad114 Mmap
44cfe95a Pkg
de0858da Printf
3fa0cd96 REPL
9a3f8284 Random
ea8e919c SHA
9e88b42a Serialization
1a1011a3 SharedArrays
6462fe0b Sockets
2f01184e SparseArrays
10745b16 Statistics
4607b0f0 SuiteSparse
8dfed614 Test
cf7118a7 UUIDs
4ec0a83e Unicode
Update message: ChaosTools v1.9
A method to calculate the expansion entropy for discrete and
continuous systems is now included as `expansionentropy`!
See B. Hunt & E. Ott, ‘Defining Chaos’, Chaos 25.9 (2015).
Testing lyapunov exponents...
Test Summary: | Pass Total
Lyapunovs | 38 38
Test Summary: | Pass Total
1D Lyapunovs | 1 1
Test Summary: | Pass Total
Negative λ, continuous | 3 3
Test Summary: | Pass Total
Negative λ, discrete | 2 2
Test Summary: | Pass Total
Lyapunov convergence | 1 1
Testing GALI...
Test Summary: | Pass Total
GALI discrete | 30 30
Test Summary: | Pass Total
GALI continuous | 24 24
Testing Partially predictable chaos...
61.661815 seconds (56.85 M allocations: 2.085 GiB, 3.77% gc time)
strongly chaotic: done
22.570787 seconds (16.15 M allocations: 258.377 MiB, 0.60% gc time)
ppc1: done
17.028555 seconds (12.56 M allocations: 192.270 MiB, 0.40% gc time)
ppc2: done
17.605666 seconds (12.76 M allocations: 203.112 MiB, 0.36% gc time)
laminar: done
Test Summary: | Pass Total
Predictability Lorenz | 12 12
Test Summary: | Pass Total
Predictability Discrete | 4 4
Testing poincare sections...
Test Summary: | Pass Total
Poincare SOS | 165 165
Test Summary: | Pass Total
Produce OD | 5 5
Testing orbit diagrams...
Test Summary: | Pass Total
Orbit Diagram | 5 5
Testing finding stable & unstable fixed points...
Test Summary: | Pass Total
Standard Map | 38 38
Testing generalized entropy (genentropy) & linear scaling...
Test Summary: | Pass Total
Generalized Dimensions | 7 7
Testing dimension calls (all names)...
Test Summary: | Pass Total
Dimension calls | 3 3
Testing permutation entropy...
Test Summary: | Pass Total
Permutation Entropy | 7 7
Testing nonlinear timeseries analysis...
Test Summary: | Pass Total
Henon reconstruct | 13 13
Test Summary: | Pass Total
Multidim Multitime R | 1 1
Test Summary: | Pass Total
Broomhead-King | 33 33
Testing period estimation...
Test Summary: | Pass Total
sin(t) | 5 5
Test Summary: | Pass Total
sin(2t) | 5 5
Test Summary: | Pass Total
Roessler | 5 5
Test Summary: | Pass Total
Modified FitzHugh-Nagumo | 5 5
Testing 0-1 chaos test...
Test Summary: | Pass Total
logistic | 4 4
Test Summary: | Pass Total
Standard Map | 4 4
Test Summary: | Pass Total
henonheiles | 5 5
Testing expansion entropy...
Test Summary: | Pass Total
Expansion entropy | 106 106
Test took total time of:
970.9716329574585 seconds or 16.183 minutes
Testing ChaosTools tests passed