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1.5.0-DEV-4085873ec6.log
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Julia Version 1.5.0-DEV.431
Commit 4085873ec6 (2020-03-10 23:48 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed Opus_jll ───────────────────── v1.3.1+0
Installed AxisAlgorithms ─────────────── v1.0.0
Installed Homebrew ───────────────────── v0.7.1
Installed AbstractFFTs ───────────────── v0.5.0
Installed StanMCMCChain ──────────────── v4.1.0
Installed Observables ────────────────── v0.3.1
Installed BinaryProvider ─────────────── v0.5.8
Installed CategoricalArrays ──────────── v0.7.7
Installed PositiveFactorizations ─────── v0.2.3
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed TableTraits ────────────────── v1.0.0
Installed CommonSubexpressions ───────── v0.2.0
Installed ColorTypes ─────────────────── v0.9.1
Installed DiffRules ──────────────────── v1.0.1
Installed Contour ────────────────────── v0.5.2
Installed Colors ─────────────────────── v0.11.2
Installed DataValues ─────────────────── v0.4.13
Installed Arpack ─────────────────────── v0.4.0
Installed SpecialFunctions ───────────── v0.10.0
Installed CompilerSupportLibraries_jll ─ v0.2.0+1
Installed Measures ───────────────────── v0.3.1
Installed FillArrays ─────────────────── v0.8.5
Installed NamedArrays ────────────────── v0.9.4
Installed Rmath_jll ──────────────────── v0.2.2+0
Installed TableOperations ────────────── v0.2.1
Installed StaticArrays ───────────────── v0.12.1
Installed Reexport ───────────────────── v0.2.0
Installed libass_jll ─────────────────── v0.14.0+0
Installed Widgets ────────────────────── v0.6.2
Installed Requires ───────────────────── v1.0.1
Installed Optim ──────────────────────── v0.20.1
Installed MKL_jll ────────────────────── v2019.0.117+2
Installed QuadGK ─────────────────────── v2.3.1
Installed SortingAlgorithms ──────────── v0.3.1
Installed InvertedIndices ────────────── v1.0.0
Installed ConsoleProgressMonitor ─────── v0.1.2
Installed Bzip2_jll ──────────────────── v1.0.6+1
Installed Tables ─────────────────────── v1.0.3
Installed DataStructures ─────────────── v0.17.10
Installed Plots ──────────────────────── v0.29.6
Installed TerminalLoggers ────────────── v0.1.1
Installed x265_jll ───────────────────── v3.0.0+0
Installed LAME_jll ───────────────────── v3.100.0+0
Installed KernelDensity ──────────────── v0.5.1
Installed WoodburyMatrices ───────────── v0.5.1
Installed LibVPX_jll ─────────────────── v1.8.1+1
Installed FreeType2_jll ──────────────── v2.10.1+1
Installed IntervalSets ───────────────── v0.4.0
Installed Ratios ─────────────────────── v0.4.0
Installed JSON ───────────────────────── v0.21.0
Installed libvorbis_jll ──────────────── v1.3.6+2
Installed StatsFuns ──────────────────── v0.9.4
Installed Compat ─────────────────────── v2.2.0
Installed DataAPI ────────────────────── v1.1.0
Installed ProgressMeter ──────────────── v1.2.0
Installed PDMats ─────────────────────── v0.9.11
Installed Parsers ────────────────────── v0.3.12
Installed OffsetArrays ───────────────── v1.0.3
Installed FFMPEG ─────────────────────── v0.3.0
Installed EllipsisNotation ───────────── v0.4.0
Installed LegacyStrings ──────────────── v0.4.1
Installed CMake ──────────────────────── v1.2.0
Installed AbstractTrees ──────────────── v0.3.2
Installed DataFrames ─────────────────── v0.20.2
Installed Distributions ──────────────── v0.22.5
Installed Parameters ─────────────────── v0.12.0
Installed Showoff ────────────────────── v0.3.1
Installed RangeArrays ────────────────── v0.3.2
Installed MCMCChains ─────────────────── v3.0.4
Installed MCMCChain ──────────────────── v0.2.3
Installed WeakRefStrings ─────────────── v0.6.2
Installed x264_jll ───────────────────── v2019.5.25+1
Installed AxisArrays ─────────────────── v0.4.2
Installed AbstractMCMC ───────────────── v0.5.3
Installed Interpolations ─────────────── v0.12.5
Installed FFTW ───────────────────────── v1.2.0
Installed OpenSSL_jll ────────────────── v1.1.1+1
Installed FFMPEG_jll ─────────────────── v4.1.0+2
Installed JLD ────────────────────────── v0.9.2
Installed RecipesBase ────────────────── v0.8.0
Installed BinDeps ────────────────────── v0.8.10
Installed Formatting ─────────────────── v0.4.1
Installed Ogg_jll ────────────────────── v1.3.3+0
Installed OrderedCollections ─────────── v1.1.0
Installed Arpack_jll ─────────────────── v3.5.0+2
Installed OpenBLAS_jll ───────────────── v0.3.7+7
Installed DocStringExtensions ────────── v0.8.1
Installed HDF5_jll ───────────────────── v1.10.5+5
Installed Missings ───────────────────── v0.4.3
Installed FFTW_jll ───────────────────── v3.3.9+4
Installed LoggingExtras ──────────────── v0.4.0
Installed Blosc ──────────────────────── v0.5.1
Installed StatsPlots ─────────────────── v0.14.1
Installed FilePathsBase ──────────────── v0.7.0
Installed HDF5 ───────────────────────── v0.13.0
Installed CSV ────────────────────────── v0.5.26
Installed PooledArrays ───────────────── v0.5.3
Installed FriBidi_jll ────────────────── v1.0.5+2
Installed FiniteDiff ─────────────────── v2.2.1
Installed DataValueInterfaces ────────── v1.0.0
Installed DiffResults ────────────────── v1.0.2
Installed libfdk_aac_jll ─────────────── v0.1.6+1
Installed FileIO ─────────────────────── v1.2.3
Installed CMakeWrapper ───────────────── v0.2.3
Installed Distances ──────────────────── v0.8.2
Installed Zlib_jll ───────────────────── v1.2.11+8
Installed Combinatorics ──────────────── v1.0.0
Installed IntelOpenMP_jll ────────────── v2018.0.3+0
Installed StatsBase ──────────────────── v0.32.2
Installed Documenter ─────────────────── v0.24.5
Installed URIParser ──────────────────── v0.4.0
Installed NaNMath ────────────────────── v0.3.3
Installed FixedPointNumbers ──────────── v0.7.1
Installed ArrayInterface ─────────────── v2.5.1
Installed IteratorInterfaceExtensions ── v1.0.0
Installed NearestNeighbors ───────────── v0.4.4
Installed Clustering ─────────────────── v0.13.5
Installed PlotThemes ─────────────────── v1.0.1
Installed ProgressLogging ────────────── v0.1.1
Installed LeftChildRightSiblingTrees ─── v0.1.2
Installed LineSearches ───────────────── v7.0.1
Installed PlotUtils ──────────────────── v0.6.3
Installed CmdStan ────────────────────── v5.2.0
Installed GeometryTypes ──────────────── v0.8.1
Installed MultivariateStats ──────────── v0.7.0
Installed IterTools ──────────────────── v1.3.0
Installed Rmath ──────────────────────── v0.6.1
Installed NLSolversBase ──────────────── v7.6.1
Installed ForwardDiff ────────────────── v0.10.9
Installed Polynomials ────────────────── v0.6.1
Installed GR ─────────────────────────── v0.47.0
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Updating `~/.julia/environments/v1.5/Project.toml`
8f1571ae + StanMCMCChain v4.1.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
621f4979 + AbstractFFTs v0.5.0
80f14c24 + AbstractMCMC v0.5.3
1520ce14 + AbstractTrees v0.3.2
7d9fca2a + Arpack v0.4.0
68821587 + Arpack_jll v3.5.0+2
4fba245c + ArrayInterface v2.5.1
13072b0f + AxisAlgorithms v1.0.0
39de3d68 + AxisArrays v0.4.2
9e28174c + BinDeps v0.8.10
b99e7846 + BinaryProvider v0.5.8
a74b3585 + Blosc v0.5.1
6e34b625 + Bzip2_jll v1.0.6+1
631607c0 + CMake v1.2.0
d5fb7624 + CMakeWrapper v0.2.3
336ed68f + CSV v0.5.26
324d7699 + CategoricalArrays v0.7.7
aaaa29a8 + Clustering v0.13.5
593b3428 + CmdStan v5.2.0
3da002f7 + ColorTypes v0.9.1
5ae59095 + Colors v0.11.2
861a8166 + Combinatorics v1.0.0
bbf7d656 + CommonSubexpressions v0.2.0
34da2185 + Compat v2.2.0
e66e0078 + CompilerSupportLibraries_jll v0.2.0+1
88cd18e8 + ConsoleProgressMonitor v0.1.2
d38c429a + Contour v0.5.2
9a962f9c + DataAPI v1.1.0
a93c6f00 + DataFrames v0.20.2
864edb3b + DataStructures v0.17.10
e2d170a0 + DataValueInterfaces v1.0.0
e7dc6d0d + DataValues v0.4.13
163ba53b + DiffResults v1.0.2
b552c78f + DiffRules v1.0.1
b4f34e82 + Distances v0.8.2
31c24e10 + Distributions v0.22.5
ffbed154 + DocStringExtensions v0.8.1
e30172f5 + Documenter v0.24.5
da5c29d0 + EllipsisNotation v0.4.0
c87230d0 + FFMPEG v0.3.0
b22a6f82 + FFMPEG_jll v4.1.0+2
7a1cc6ca + FFTW v1.2.0
f5851436 + FFTW_jll v3.3.9+4
5789e2e9 + FileIO v1.2.3
48062228 + FilePathsBase v0.7.0
1a297f60 + FillArrays v0.8.5
6a86dc24 + FiniteDiff v2.2.1
53c48c17 + FixedPointNumbers v0.7.1
59287772 + Formatting v0.4.1
f6369f11 + ForwardDiff v0.10.9
d7e528f0 + FreeType2_jll v2.10.1+1
559328eb + FriBidi_jll v1.0.5+2
28b8d3ca + GR v0.47.0
4d00f742 + GeometryTypes v0.8.1
f67ccb44 + HDF5 v0.13.0
0234f1f7 + HDF5_jll v1.10.5+5
d9be37ee + Homebrew v0.7.1
1d5cc7b8 + IntelOpenMP_jll v2018.0.3+0
a98d9a8b + Interpolations v0.12.5
8197267c + IntervalSets v0.4.0
41ab1584 + InvertedIndices v1.0.0
c8e1da08 + IterTools v1.3.0
82899510 + IteratorInterfaceExtensions v1.0.0
4138dd39 + JLD v0.9.2
682c06a0 + JSON v0.21.0
5ab0869b + KernelDensity v0.5.1
c1c5ebd0 + LAME_jll v3.100.0+0
1d6d02ad + LeftChildRightSiblingTrees v0.1.2
1b4a561d + LegacyStrings v0.4.1
dd192d2f + LibVPX_jll v1.8.1+1
d3d80556 + LineSearches v7.0.1
e6f89c97 + LoggingExtras v0.4.0
1671dc4f + MCMCChain v0.2.3
c7f686f2 + MCMCChains v3.0.4
856f044c + MKL_jll v2019.0.117+2
442fdcdd + Measures v0.3.1
e1d29d7a + Missings v0.4.3
6f286f6a + MultivariateStats v0.7.0
d41bc354 + NLSolversBase v7.6.1
77ba4419 + NaNMath v0.3.3
86f7a689 + NamedArrays v0.9.4
b8a86587 + NearestNeighbors v0.4.4
510215fc + Observables v0.3.1
6fe1bfb0 + OffsetArrays v1.0.3
e7412a2a + Ogg_jll v1.3.3+0
4536629a + OpenBLAS_jll v0.3.7+7
458c3c95 + OpenSSL_jll v1.1.1+1
efe28fd5 + OpenSpecFun_jll v0.5.3+3
429524aa + Optim v0.20.1
91d4177d + Opus_jll v1.3.1+0
bac558e1 + OrderedCollections v1.1.0
90014a1f + PDMats v0.9.11
d96e819e + Parameters v0.12.0
69de0a69 + Parsers v0.3.12
ccf2f8ad + PlotThemes v1.0.1
995b91a9 + PlotUtils v0.6.3
91a5bcdd + Plots v0.29.6
f27b6e38 + Polynomials v0.6.1
2dfb63ee + PooledArrays v0.5.3
85a6dd25 + PositiveFactorizations v0.2.3
33c8b6b6 + ProgressLogging v0.1.1
92933f4c + ProgressMeter v1.2.0
1fd47b50 + QuadGK v2.3.1
b3c3ace0 + RangeArrays v0.3.2
c84ed2f1 + Ratios v0.4.0
3cdcf5f2 + RecipesBase v0.8.0
189a3867 + Reexport v0.2.0
ae029012 + Requires v1.0.1
79098fc4 + Rmath v0.6.1
f50d1b31 + Rmath_jll v0.2.2+0
992d4aef + Showoff v0.3.1
a2af1166 + SortingAlgorithms v0.3.1
276daf66 + SpecialFunctions v0.10.0
8f1571ae + StanMCMCChain v4.1.0
90137ffa + StaticArrays v0.12.1
2913bbd2 + StatsBase v0.32.2
4c63d2b9 + StatsFuns v0.9.4
f3b207a7 + StatsPlots v0.14.1
ab02a1b2 + TableOperations v0.2.1
3783bdb8 + TableTraits v1.0.0
bd369af6 + Tables v1.0.3
5d786b92 + TerminalLoggers v0.1.1
30578b45 + URIParser v0.4.0
ea10d353 + WeakRefStrings v0.6.2
cc8bc4a8 + Widgets v0.6.2
efce3f68 + WoodburyMatrices v0.5.1
83775a58 + Zlib_jll v1.2.11+8
0ac62f75 + libass_jll v0.14.0+0
f638f0a6 + libfdk_aac_jll v0.1.6+1
f27f6e37 + libvorbis_jll v1.3.6+2
1270edf5 + x264_jll v2019.5.25+1
dfaa095f + x265_jll v3.0.0+0
2a0f44e3 + Base64
ade2ca70 + Dates
8bb1440f + DelimitedFiles
8ba89e20 + Distributed
9fa8497b + Future
b77e0a4c + InteractiveUtils
76f85450 + LibGit2
8f399da3 + Libdl
37e2e46d + LinearAlgebra
56ddb016 + Logging
d6f4376e + Markdown
a63ad114 + Mmap
44cfe95a + Pkg
de0858da + Printf
3fa0cd96 + REPL
9a3f8284 + Random
ea8e919c + SHA
9e88b42a + Serialization
1a1011a3 + SharedArrays
6462fe0b + Sockets
2f01184e + SparseArrays
10745b16 + Statistics
4607b0f0 + SuiteSparse
8dfed614 + Test
cf7118a7 + UUIDs
4ec0a83e + Unicode
Building Homebrew → `~/.julia/packages/Homebrew/s09IX/deps/build.log`
Building GR ──────→ `~/.julia/packages/GR/tPkHV/deps/build.log`
Building Plots ───→ `~/.julia/packages/Plots/rNwM4/deps/build.log`
Building CMake ───→ `~/.julia/packages/CMake/ULbyn/deps/build.log`
Building FFTW ────→ `~/.julia/packages/FFTW/qqcBj/deps/build.log`
Building Blosc ───→ `~/.julia/packages/Blosc/lzFr0/deps/build.log`
Building HDF5 ────→ `~/.julia/packages/HDF5/XQlr9/deps/build.log`
Building CmdStan ─→ `~/.julia/packages/CmdStan/NoDBJ/deps/build.log`
Testing StanMCMCChain
Status `/tmp/jl_z9r8YM/Project.toml`
593b3428 CmdStan v5.2.0
28b8d3ca GR v0.47.0
4138dd39 JLD v0.9.2
1671dc4f MCMCChain v0.2.3
91a5bcdd Plots v0.29.6
189a3867 Reexport v0.2.0
8f1571ae StanMCMCChain v4.1.0
2913bbd2 StatsBase v0.32.2
10745b16 Statistics
8dfed614 Test
Status `/tmp/jl_z9r8YM/Manifest.toml`
621f4979 AbstractFFTs v0.5.0
80f14c24 AbstractMCMC v0.5.3
1520ce14 AbstractTrees v0.3.2
7d9fca2a Arpack v0.4.0
68821587 Arpack_jll v3.5.0+2
4fba245c ArrayInterface v2.5.1
13072b0f AxisAlgorithms v1.0.0
39de3d68 AxisArrays v0.4.2
9e28174c BinDeps v0.8.10
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┌ Warning: Environment variable CMDSTAN_HOME not set. Use set_cmdstan_home!.
└ @ CmdStan ~/.julia/packages/CmdStan/NoDBJ/src/CmdStan.jl:27
┌ Warning: Environment variable CMDSTAN_HOME not set. Use set_cmdstan_home!.
└ @ CmdStan ~/.julia/packages/CmdStan/NoDBJ/src/CmdStan.jl:27
Running tests for StanMCMCChain-j1.0-v4.0.1:
CMDSTAN_HOME not set or found.
Skipping all tests that depend on CmdStan!
Testing StanMCMCChain tests passed