1.6.0-DEV-03e1a89ff1.log

Julia Version 1.6.0-DEV.633
Commit 03e1a89ff1 (2020-08-13 14:37 UTC)
Platform Info:
  OS: Linux (x86_64-pc-linux-gnu)
  CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512)
Environment:
  JULIA_DEPOT_PATH = ::/usr/local/share/julia
  JULIA_NUM_THREADS = 2

  Resolving package versions...
[ Info: LEGAL NOTICE: package operations send anonymous data about your system to https://pkg.julialang.org (your current package server), including the operating system and Julia versions you are using, and a random client UUID. Running `Pkg.telemetryinfo()` will show exactly what data is sent. See https://julialang.org/legal/data/ for more details about what this data is used for, how long it is retained, and how to opt out of sending it.
  Installed InvertedIndices ────────────── v1.0.0
  Installed Arpack_jll ─────────────────── v3.5.0+3
  Installed PDMats ─────────────────────── v0.9.12
  Installed Alpaca ─────────────────────── v0.0.1
  Installed IteratorInterfaceExtensions ── v1.0.0
  Installed Rmath ──────────────────────── v0.6.1
  Installed Parsers ────────────────────── v1.0.10
  Installed DataFrames ─────────────────── v0.19.4
  Installed DataAPI ────────────────────── v1.3.0
  Installed FillArrays ─────────────────── v0.8.14
  Installed OpenSpecFun_jll ────────────── v0.5.3+3
  Installed OpenBLAS_jll ───────────────── v0.3.9+5
  Installed Rmath_jll ──────────────────── v0.2.2+1
  Installed ShiftedArrays ──────────────── v1.0.0
  Installed RCall ──────────────────────── v0.13.6
  Installed StatsFuns ──────────────────── v0.9.5
  Installed CategoricalArrays ──────────── v0.7.7
  Installed OrderedCollections ─────────── v1.3.0
  Installed Missings ───────────────────── v0.4.3
  Installed DataValueInterfaces ────────── v1.0.0
  Installed CompilerSupportLibraries_jll ─ v0.3.3+0
  Installed Requires ───────────────────── v1.0.1
  Installed SpecialFunctions ───────────── v0.9.0
  Installed Reexport ───────────────────── v0.2.0
  Installed Compat ─────────────────────── v2.2.0
  Installed QuadGK ─────────────────────── v2.4.0
  Installed Tables ─────────────────────── v0.2.11
  Installed StatsBase ──────────────────── v0.32.2
  Installed VersionParsing ─────────────── v1.2.0
  Installed Conda ──────────────────────── v1.4.1
  Installed JSON ───────────────────────── v0.21.0
  Installed TableTraits ────────────────── v1.0.0
  Installed Arpack ─────────────────────── v0.4.0
  Installed StatsModels ────────────────── v0.6.12
  Installed WinReg ─────────────────────── v0.3.1
  Installed PooledArrays ───────────────── v0.5.3
  Installed Distributions ──────────────── v0.21.12
  Installed SortingAlgorithms ──────────── v0.3.1
  Installed DataStructures ─────────────── v0.17.20
Updating `~/.julia/environments/v1.6/Project.toml`
  [fcf20ba4] + Alpaca v0.0.1
Updating `~/.julia/environments/v1.6/Manifest.toml`
  [fcf20ba4] + Alpaca v0.0.1
  [7d9fca2a] + Arpack v0.4.0
  [68821587] + Arpack_jll v3.5.0+3
  [324d7699] + CategoricalArrays v0.7.7
  [34da2185] + Compat v2.2.0
  [e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
  [8f4d0f93] + Conda v1.4.1
  [9a962f9c] + DataAPI v1.3.0
  [a93c6f00] + DataFrames v0.19.4
  [864edb3b] + DataStructures v0.17.20
  [e2d170a0] + DataValueInterfaces v1.0.0
  [31c24e10] + Distributions v0.21.12
  [1a297f60] + FillArrays v0.8.14
  [41ab1584] + InvertedIndices v1.0.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [682c06a0] + JSON v0.21.0
  [e1d29d7a] + Missings v0.4.3
  [4536629a] + OpenBLAS_jll v0.3.9+5
  [efe28fd5] + OpenSpecFun_jll v0.5.3+3
  [bac558e1] + OrderedCollections v1.3.0
  [90014a1f] + PDMats v0.9.12
  [69de0a69] + Parsers v1.0.10
  [2dfb63ee] + PooledArrays v0.5.3
  [1fd47b50] + QuadGK v2.4.0
  [6f49c342] + RCall v0.13.6
  [189a3867] + Reexport v0.2.0
  [ae029012] + Requires v1.0.1
  [79098fc4] + Rmath v0.6.1
  [f50d1b31] + Rmath_jll v0.2.2+1
  [1277b4bf] + ShiftedArrays v1.0.0
  [a2af1166] + SortingAlgorithms v0.3.1
  [276daf66] + SpecialFunctions v0.9.0
  [2913bbd2] + StatsBase v0.32.2
  [4c63d2b9] + StatsFuns v0.9.5
  [3eaba693] + StatsModels v0.6.12
  [3783bdb8] + TableTraits v1.0.0
  [bd369af6] + Tables v0.2.11
  [81def892] + VersionParsing v1.2.0
  [1b915085] + WinReg v0.3.1
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [8bb1440f] + DelimitedFiles
  [8ba89e20] + Distributed
  [9fa8497b] + Future
  [b77e0a4c] + InteractiveUtils
  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [a63ad114] + Mmap
  [44cfe95a] + Pkg
  [de0858da] + Printf
  [3fa0cd96] + REPL
  [9a3f8284] + Random
  [ea8e919c] + SHA
  [9e88b42a] + Serialization
  [1a1011a3] + SharedArrays
  [6462fe0b] + Sockets
  [2f01184e] + SparseArrays
  [10745b16] + Statistics
  [4607b0f0] + SuiteSparse
  [8dfed614] + Test
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
   Building Conda → `~/.julia/packages/Conda/3rPhK/deps/build.log`
   Building RCall → `~/.julia/packages/RCall/jOnwc/deps/build.log`
    Testing Alpaca
┌ Error: Pkg.Resolve.ResolverError("Unsatisfiable requirements detected for package CSV [336ed68f]:\n CSV [336ed68f] log:\n ├─possible versions are: [0.3.0-0.3.1, 0.4.0-0.4.3, 0.5.0-0.5.26, 0.6.0-0.6.2, 0.7.0-0.7.7] or uninstalled\n ├─restricted by compatibility requirements with Parsers [69de0a69] to versions: [0.3.0-0.3.1, 0.4.0, 0.6.0-0.6.2, 0.7.0-0.7.7] or uninstalled\n │ └─Parsers [69de0a69] log:\n │   ├─possible versions are: [0.1.0, 0.2.0-0.2.5, 0.2.7-0.2.16, 0.2.18, 0.2.20, 0.2.22, 0.3.0-0.3.12, 1.0.0-1.0.10] or uninstalled\n │   └─restricted to versions 1.0.10 by an explicit requirement, leaving only versions 1.0.10\n ├─restricted by compatibility requirements with Tables [bd369af6] to versions: [0.3.0-0.3.1, 0.4.0-0.4.3, 0.5.0-0.5.23] or uninstalled, leaving only versions: [0.3.0-0.3.1, 0.4.0] or uninstalled\n │ └─Tables [bd369af6] log:\n │   ├─possible versions are: [0.1.0-0.1.15, 0.1.17-0.1.19, 0.2.0-0.2.11, 1.0.0-1.0.5] or uninstalled\n │   └─restricted to versions 0.2.11 by an explicit requirement, leaving only versions 0.2.11\n ├─restricted by compatibility requirements with CategoricalArrays [324d7699] to versions: [0.5.13-0.5.26, 0.6.0-0.6.1] or uninstalled, leaving only versions: uninstalled\n │ └─CategoricalArrays [324d7699] log:\n │   ├─possible versions are: [0.3.11, 0.3.13-0.3.14, 0.4.0, 0.5.0-0.5.5, 0.6.0, 0.7.0-0.7.7, 0.8.0-0.8.1] or uninstalled\n │   └─restricted to versions 0.7.7 by an explicit requirement, leaving only versions 0.7.7\n └─restricted by compatibility requirements with RDatasets [ce6b1742] to versions: [0.5.0-0.5.26, 0.6.0-0.6.2, 0.7.0-0.7.7] — no versions left\n   └─RDatasets [ce6b1742] log:\n     ├─possible versions are: [0.5.0, 0.6.0-0.6.10] or uninstalled\n     ├─restricted to versions * by an explicit requirement, leaving only versions [0.5.0, 0.6.0-0.6.10]\n     └─restricted by compatibility requirements with DataFrames [a93c6f00] to versions: 0.6.3-0.6.10 or uninstalled, leaving only versions: 0.6.3-0.6.10\n       └─DataFrames [a93c6f00] log:\n         ├─possible versions are: [0.11.7, 0.12.0, 0.13.0-0.13.1, 0.14.0-0.14.1, 0.15.0-0.15.2, 0.16.0, 0.17.0-0.17.1, 0.18.0-0.18.4, 0.19.0-0.19.4, 0.20.0-0.20.2, 0.21.0-0.21.6] or uninstalled\n         └─restricted to versions 0.19.4 by an explicit requirement, leaving only versions 0.19.4", nothing)
└ @ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1416
Status `/tmp/jl_2cDr0W/Project.toml`
  [fcf20ba4] Alpaca v0.0.1
  [34da2185] Compat v2.2.0
  [a93c6f00] DataFrames v0.19.4
  [31c24e10] Distributions v0.21.12
  [6f49c342] RCall v0.13.6
  [ce6b1742] RDatasets v0.6.10
  [189a3867] Reexport v0.2.0
  [2913bbd2] StatsBase v0.32.2
  [3eaba693] StatsModels v0.6.12
  [de0858da] Printf
  [9a3f8284] Random
  [10745b16] Statistics
  [8dfed614] Test
Status `/tmp/jl_2cDr0W/Manifest.toml`
  [fcf20ba4] Alpaca v0.0.1
  [7d9fca2a] Arpack v0.4.0
  [68821587] Arpack_jll v3.5.0+3
  [b99e7846] BinaryProvider v0.5.10
  [336ed68f] CSV v0.5.23
  [324d7699] CategoricalArrays v0.7.7
  [944b1d66] CodecZlib v0.6.0
  [34da2185] Compat v2.2.0
  [e66e0078] CompilerSupportLibraries_jll v0.3.3+0
  [8f4d0f93] Conda v1.4.1
  [9a962f9c] DataAPI v1.3.0
  [a93c6f00] DataFrames v0.19.4
  [864edb3b] DataStructures v0.17.20
  [e2d170a0] DataValueInterfaces v1.0.0
  [31c24e10] Distributions v0.21.12
  [e2ba6199] ExprTools v0.1.1
  [8f5d6c58] EzXML v1.1.0
  [5789e2e9] FileIO v1.4.1
  [48062228] FilePathsBase v0.7.0
  [1a297f60] FillArrays v0.8.14
  [41ab1584] InvertedIndices v1.0.0
  [82899510] IteratorInterfaceExtensions v1.0.0
  [682c06a0] JSON v0.21.0
  [94ce4f54] Libiconv_jll v1.16.0+5
  [e1d29d7a] Missings v0.4.3
  [78c3b35d] Mocking v0.7.1
  [4536629a] OpenBLAS_jll v0.3.9+5
  [efe28fd5] OpenSpecFun_jll v0.5.3+3
  [bac558e1] OrderedCollections v1.3.0
  [90014a1f] PDMats v0.9.12
  [69de0a69] Parsers v0.3.12
  [2dfb63ee] PooledArrays v0.5.3
  [1fd47b50] QuadGK v2.4.0
  [6f49c342] RCall v0.13.6
  [df47a6cb] RData v0.7.1
  [ce6b1742] RDatasets v0.6.10
  [3cdcf5f2] RecipesBase v1.0.2
  [189a3867] Reexport v0.2.0
  [ae029012] Requires v1.0.1
  [79098fc4] Rmath v0.6.1
  [f50d1b31] Rmath_jll v0.2.2+1
  [1277b4bf] ShiftedArrays v1.0.0
  [a2af1166] SortingAlgorithms v0.3.1
  [276daf66] SpecialFunctions v0.9.0
  [2913bbd2] StatsBase v0.32.2
  [4c63d2b9] StatsFuns v0.9.5
  [3eaba693] StatsModels v0.6.12
  [3783bdb8] TableTraits v1.0.0
  [bd369af6] Tables v0.2.11
  [f269a46b] TimeZones v1.3.2
  [3bb67fe8] TranscodingStreams v0.9.5
  [81def892] VersionParsing v1.2.0
  [ea10d353] WeakRefStrings v0.6.2
  [1b915085] WinReg v0.3.1
  [02c8fc9c] XML2_jll v2.9.10+1
  [83775a58] Zlib_jll v1.2.11+15
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [8bb1440f] DelimitedFiles
  [8ba89e20] Distributed
  [9fa8497b] Future
  [b77e0a4c] InteractiveUtils
  [76f85450] LibGit2
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [a63ad114] Mmap
  [44cfe95a] Pkg
  [de0858da] Printf
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA
  [9e88b42a] Serialization
  [1a1011a3] SharedArrays
  [6462fe0b] Sockets
  [2f01184e] SparseArrays
  [10745b16] Statistics
  [4607b0f0] SuiteSparse
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
ERROR: LoadError: UndefVarError: parameter_upper_bound not defined
Stacktrace:
 [1] include
   @ ./Base.jl:375 [inlined]
 [2] include_package_for_output(input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId,UInt64}}, uuid_tuple::Tuple{UInt64,UInt64}, source::String)
   @ Base ./loading.jl:1219
 [3] top-level scope
   @ none:1
 [4] eval
   @ ./boot.jl:344 [inlined]
 [5] eval(x::Expr)
   @ Base.MainInclude ./client.jl:445
 [6] top-level scope
   @ none:1
in expression starting at /home/pkgeval/.julia/packages/Compat/fSUv4/src/Compat.jl:3
ERROR: LoadError: Failed to precompile Compat [34da2185-b29b-5c13-b0c7-acf172513d20] to /home/pkgeval/.julia/compiled/v1.6/Compat/GSFWK_9fPsz.ji.
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:33
  [2] compilecache(pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1350
  [3] _require(pkg::Base.PkgId)
    @ Base ./loading.jl:1030
  [4] require(uuidkey::Base.PkgId)
    @ Base ./loading.jl:928
  [5] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:923
  [6] include
    @ ./Base.jl:375 [inlined]
  [7] include_package_for_output(input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId,UInt64}}, uuid_tuple::Tuple{UInt64,UInt64}, source::String)
    @ Base ./loading.jl:1219
  [8] top-level scope
    @ none:1
  [9] eval
    @ ./boot.jl:344 [inlined]
 [10] eval(x::Expr)
    @ Base.MainInclude ./client.jl:445
 [11] top-level scope
    @ none:1
in expression starting at /home/pkgeval/.julia/packages/CategoricalArrays/dmrjI/src/CategoricalArrays.jl:1
ERROR: LoadError: Failed to precompile CategoricalArrays [324d7699-5711-5eae-9e2f-1d82baa6b597] to /home/pkgeval/.julia/compiled/v1.6/CategoricalArrays/RHXoP_9fPsz.ji.
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:33
  [2] compilecache(pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1350
  [3] _require(pkg::Base.PkgId)
    @ Base ./loading.jl:1030
  [4] require(uuidkey::Base.PkgId)
    @ Base ./loading.jl:928
  [5] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:923
  [6] include
    @ ./Base.jl:375 [inlined]
  [7] include_package_for_output(input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId,UInt64}}, uuid_tuple::Tuple{UInt64,UInt64}, source::String)
    @ Base ./loading.jl:1219
  [8] top-level scope
    @ none:1
  [9] eval
    @ ./boot.jl:344 [inlined]
 [10] eval(x::Expr)
    @ Base.MainInclude ./client.jl:445
 [11] top-level scope
    @ none:1
in expression starting at /home/pkgeval/.julia/packages/RCall/jOnwc/src/RCall.jl:2
ERROR: LoadError: Failed to precompile RCall [6f49c342-dc21-5d91-9882-a32aef131414] to /home/pkgeval/.julia/compiled/v1.6/RCall/8GFyb_9fPsz.ji.
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:33
  [2] compilecache(pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1350
  [3] _require(pkg::Base.PkgId)
    @ Base ./loading.jl:1030
  [4] require(uuidkey::Base.PkgId)
    @ Base ./loading.jl:928
  [5] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:923
  [6] include
    @ ./Base.jl:375 [inlined]
  [7] include_package_for_output(input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId,UInt64}}, uuid_tuple::Tuple{UInt64,UInt64}, source::String)
    @ Base ./loading.jl:1219
  [8] top-level scope
    @ none:1
  [9] eval
    @ ./boot.jl:344 [inlined]
 [10] eval(x::Expr)
    @ Base.MainInclude ./client.jl:445
 [11] top-level scope
    @ none:1
in expression starting at /home/pkgeval/.julia/packages/Alpaca/fga9w/src/Alpaca.jl:1
ERROR: LoadError: Failed to precompile Alpaca [fcf20ba4-066e-11ea-0417-5fa1eb97d662] to /home/pkgeval/.julia/compiled/v1.6/Alpaca/SID8t_9fPsz.ji.
Stacktrace:
 [1] error(s::String)
   @ Base ./error.jl:33
 [2] compilecache(pkg::Base.PkgId, path::String)
   @ Base ./loading.jl:1350
 [3] _require(pkg::Base.PkgId)
   @ Base ./loading.jl:1030
 [4] require(uuidkey::Base.PkgId)
   @ Base ./loading.jl:928
 [5] require(into::Module, mod::Symbol)
   @ Base ./loading.jl:923
 [6] include(fname::String)
   @ Base.MainInclude ./client.jl:443
 [7] top-level scope
   @ none:6
in expression starting at /home/pkgeval/.julia/packages/Alpaca/fga9w/test/runtests.jl:1
ERROR: Package Alpaca errored during testing
Stacktrace:
  [1] pkgerror(::String, ::Vararg{String,N} where N)
    @ Pkg.Types /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
    @ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1567
  [3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}})
    @ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:328
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
    @ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:315
  [5] #test#62
    @ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
  [6] test
    @ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
  [7] #test#61
    @ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
  [8] test
    @ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
  [9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}})
    @ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
 [10] test(pkg::String)
    @ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
 [11] top-level scope
    @ none:16