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Julia Version 1.6.0-DEV.1122
Commit 9392bbe347 (2020-10-03 14:15 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: AMD EPYC 7502 32-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, znver2)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed Formatting ─────────────────── v0.4.1
Installed SimpleGraphs ───────────────── v0.7.4
Installed ArrayInterface ─────────────── v2.13.3
Installed Parsers ────────────────────── v1.0.10
Installed ExprTools ──────────────────── v0.1.2
Installed SossMLJ ────────────────────── v0.1.0
Installed Requires ───────────────────── v1.1.0
Installed HTTP ───────────────────────── v0.8.19
Installed Crayons ────────────────────── v4.0.4
Installed QuadGK ─────────────────────── v2.4.1
Installed SIMDPirates ────────────────── v0.8.25
Installed Tables ─────────────────────── v1.1.0
Installed MLJScientificTypes ─────────── v0.3.0
Installed StructTypes ────────────────── v1.1.0
Installed CategoricalArrays ──────────── v0.8.3
Installed IterTools ──────────────────── v1.3.0
Installed ScientificTypes ────────────── v1.1.0
Installed LossFunctions ──────────────── v0.6.2
Installed DiffRules ──────────────────── v1.0.1
Installed SimplePartitions ───────────── v0.3.0
Installed SortingAlgorithms ──────────── v0.3.1
Installed ColorTypes ─────────────────── v0.10.9
Installed NNlib ──────────────────────── v0.7.5
Installed ChainRulesCore ─────────────── v0.9.11
Installed JuliaVariables ─────────────── v0.2.3
Installed Missings ───────────────────── v0.4.4
Installed SimpleRandom ───────────────── v0.2.1
Installed BenchmarkTools ─────────────── v0.5.0
Installed FunctionWrappers ───────────── v1.1.1
Installed ArrayLayouts ───────────────── v0.3.8
Installed AdvancedHMC ────────────────── v0.2.25
Installed CodecZlib ──────────────────── v0.7.0
Installed Distributions ──────────────── v0.23.8
Installed Multisets ──────────────────── v0.3.3
Installed LogDensityProblems ─────────── v0.10.3
Installed DiffEqDiffTools ────────────── v1.7.0
Installed Rmath_jll ──────────────────── v0.2.2+1
Installed TimeZones ──────────────────── v1.4.0
Installed BSON ───────────────────────── v0.2.6
Installed Permutations ───────────────── v0.4.0
Installed StaticArrays ───────────────── v0.12.4
Installed StatsFuns ──────────────────── v0.9.5
Installed MacroTools ─────────────────── v0.5.5
Installed PDMats ─────────────────────── v0.10.1
Installed CommonSubexpressions ───────── v0.3.0
Installed PrettyPrint ────────────────── v0.2.0
Installed GenericLinearAlgebra ───────── v0.2.4
Installed XML2_jll ───────────────────── v2.9.10+2
Installed Roots ──────────────────────── v1.0.5
Installed NameResolution ─────────────── v0.1.5
Installed DynamicHMC ─────────────────── v2.2.0
Installed ForwardDiff ────────────────── v0.10.12
Installed JSON ───────────────────────── v0.21.1
Installed DataValueInterfaces ────────── v1.0.0
Installed FillArrays ─────────────────── v0.8.14
Installed LightXML ───────────────────── v0.9.0
Installed RingLists ──────────────────── v0.2.6
Installed MLJModelInterface ──────────── v0.3.5
Installed Libiconv_jll ───────────────── v1.16.0+6
Installed Compat ─────────────────────── v3.18.0
Installed StatsBase ──────────────────── v0.33.1
Installed Rmath ──────────────────────── v0.6.1
Installed Calculus ───────────────────── v0.5.1
Installed MbedTLS ────────────────────── v1.0.2
Installed EzXML ──────────────────────── v1.1.0
Installed Combinatorics ──────────────── v1.0.2
Installed LearnBase ──────────────────── v0.4.1
Installed IteratorInterfaceExtensions ── v1.0.0
Installed TranscodingStreams ─────────── v0.9.5
Installed MuladdMacro ────────────────── v0.2.2
Installed CpuId ──────────────────────── v0.2.2
Installed VectorizationBase ──────────── v0.12.33
Installed Reexport ───────────────────── v0.2.0
Installed ZygoteRules ────────────────── v0.2.0
Installed TableTraits ────────────────── v1.0.0
Installed UnPack ─────────────────────── v1.0.2
Installed Primes ─────────────────────── v0.5.0
Installed Syslogs ────────────────────── v0.3.0
Installed LazyArrays ─────────────────── v0.16.16
Installed FilePathsBase ──────────────── v0.9.5
Installed AbstractLattices ───────────── v0.2.1
Installed MbedTLS_jll ────────────────── v2.16.8+0
Installed OffsetArrays ───────────────── v1.3.0
Installed DataAPI ────────────────────── v1.3.0
Installed NLSolversBase ──────────────── v7.5.0
Installed DataStructures ─────────────── v0.18.6
Installed ChainRules ─────────────────── v0.7.22
Installed MLStyle ────────────────────── v0.4.6
Installed OrderedCollections ─────────── v1.3.1
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed NaNMath ────────────────────── v0.3.4
Installed SLEEFPirates ───────────────── v0.5.5
Installed InplaceOps ─────────────────── v0.3.0
Installed DistributionsAD ────────────── v0.6.9
Installed Graphs ─────────────────────── v0.10.3
Installed DiffResults ────────────────── v1.0.2
Installed Bijectors ──────────────────── v0.8.6
Installed InvertedIndices ────────────── v1.0.0
Installed ReverseDiff ────────────────── v1.4.3
Installed ArgCheck ───────────────────── v2.1.0
Installed LinearAlgebraX ─────────────── v0.1.6
Installed GeneralizedGenerated ───────── v0.2.7
Installed Adapt ──────────────────────── v2.3.0
Installed Zlib_jll ───────────────────── v1.2.11+16
Installed Mocking ────────────────────── v0.7.1
Installed MappedArrays ───────────────── v0.2.2
Installed FixedPointNumbers ──────────── v0.8.4
Installed PositiveFactorizations ─────── v0.2.3
Installed ConstructionBase ───────────── v1.0.0
Installed CanonicalTraits ────────────── v0.2.2
Installed RecipesBase ────────────────── v1.1.0
Installed SpecialFunctions ───────────── v0.10.3
Installed Setfield ───────────────────── v0.7.0
Installed ComputationalResources ─────── v0.3.2
Installed DocStringExtensions ────────── v0.8.3
Installed MLJBase ────────────────────── v0.15.2
Installed Optim ──────────────────────── v0.22.0
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed SimplePolynomials ──────────── v0.2.4
Installed IniFile ────────────────────── v0.5.0
Installed MatrixFactorizations ───────── v0.5.2
Installed MonteCarloMeasurements ─────── v0.9.7
Installed Mods ───────────────────────── v1.2.4
Installed Intervals ──────────────────── v1.4.2
Installed JLSO ───────────────────────── v2.3.3
Installed PrettyTables ───────────────── v0.9.1
Installed NamedTupleTools ────────────── v0.13.6
Installed Parameters ─────────────────── v0.12.1
Installed Memento ────────────────────── v1.1.1
Installed FlexLinearAlgebra ──────────── v0.1.0
Installed LineSearches ───────────────── v7.1.0
Installed SimplePosets ───────────────── v0.1.4
Installed Polynomials ────────────────── v1.1.9
Installed ProgressMeter ──────────────── v1.4.0
Installed TransformVariables ─────────── v0.3.10
Installed Soss ───────────────────────── v0.15.2
Updating `~/.julia/environments/v1.6/Project.toml`
[cf2dc0df] + SossMLJ v0.1.0
Updating `~/.julia/environments/v1.6/Manifest.toml`
[398f06c4] + AbstractLattices v0.2.1
[79e6a3ab] + Adapt v2.3.0
[0bf59076] + AdvancedHMC v0.2.25
[dce04be8] + ArgCheck v2.1.0
[4fba245c] + ArrayInterface v2.13.3
[4c555306] + ArrayLayouts v0.3.8
[fbb218c0] + BSON v0.2.6
[6e4b80f9] + BenchmarkTools v0.5.0
[76274a88] + Bijectors v0.8.6
[49dc2e85] + Calculus v0.5.1
[a603d957] + CanonicalTraits v0.2.2
[324d7699] + CategoricalArrays v0.8.3
[082447d4] + ChainRules v0.7.22
[d360d2e6] + ChainRulesCore v0.9.11
[944b1d66] + CodecZlib v0.7.0
[3da002f7] + ColorTypes v0.10.9
[861a8166] + Combinatorics v1.0.2
[bbf7d656] + CommonSubexpressions v0.3.0
[34da2185] + Compat v3.18.0
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[ed09eef8] + ComputationalResources v0.3.2
[187b0558] + ConstructionBase v1.0.0
[adafc99b] + CpuId v0.2.2
[a8cc5b0e] + Crayons v4.0.4
[9a962f9c] + DataAPI v1.3.0
[864edb3b] + DataStructures v0.18.6
[e2d170a0] + DataValueInterfaces v1.0.0
[01453d9d] + DiffEqDiffTools v1.7.0
[163ba53b] + DiffResults v1.0.2
[b552c78f] + DiffRules v1.0.1
[31c24e10] + Distributions v0.23.8
[ced4e74d] + DistributionsAD v0.6.9
[ffbed154] + DocStringExtensions v0.8.3
[bbc10e6e] + DynamicHMC v2.2.0
[e2ba6199] + ExprTools v0.1.2
[8f5d6c58] + EzXML v1.1.0
[48062228] + FilePathsBase v0.9.5
[1a297f60] + FillArrays v0.8.14
[53c48c17] + FixedPointNumbers v0.8.4
[b67e1e5a] + FlexLinearAlgebra v0.1.0
[59287772] + Formatting v0.4.1
[f6369f11] + ForwardDiff v0.10.12
[069b7b12] + FunctionWrappers v1.1.1
[6b9d7cbe] + GeneralizedGenerated v0.2.7
[14197337] + GenericLinearAlgebra v0.2.4
[86223c79] + Graphs v0.10.3
[cd3eb016] + HTTP v0.8.19
[83e8ac13] + IniFile v0.5.0
[505f98c9] + InplaceOps v0.3.0
[d8418881] + Intervals v1.4.2
[41ab1584] + InvertedIndices v1.0.0
[c8e1da08] + IterTools v1.3.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[9da8a3cd] + JLSO v2.3.3
[682c06a0] + JSON v0.21.1
[b14d175d] + JuliaVariables v0.2.3
[5078a376] + LazyArrays v0.16.16
[7f8f8fb0] + LearnBase v0.4.1
[94ce4f54] + Libiconv_jll v1.16.0+6
[9c8b4983] + LightXML v0.9.0
[d3d80556] + LineSearches v7.1.0
[9b3f67b0] + LinearAlgebraX v0.1.6
[6fdf6af0] + LogDensityProblems v0.10.3
[30fc2ffe] + LossFunctions v0.6.2
[a7f614a8] + MLJBase v0.15.2
[e80e1ace] + MLJModelInterface v0.3.5
[2e2323e0] + MLJScientificTypes v0.3.0
[d8e11817] + MLStyle v0.4.6
[1914dd2f] + MacroTools v0.5.5
[dbb5928d] + MappedArrays v0.2.2
[a3b82374] + MatrixFactorizations v0.5.2
[739be429] + MbedTLS v1.0.2
[c8ffd9c3] + MbedTLS_jll v2.16.8+0
[f28f55f0] + Memento v1.1.1
[e1d29d7a] + Missings v0.4.4
[78c3b35d] + Mocking v0.7.1
[7475f97c] + Mods v1.2.4
[0987c9cc] + MonteCarloMeasurements v0.9.7
[46d2c3a1] + MuladdMacro v0.2.2
[3b2b4ff1] + Multisets v0.3.3
[d41bc354] + NLSolversBase v7.5.0
[872c559c] + NNlib v0.7.5
[77ba4419] + NaNMath v0.3.4
[71a1bf82] + NameResolution v0.1.5
[d9ec5142] + NamedTupleTools v0.13.6
[6fe1bfb0] + OffsetArrays v1.3.0
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[429524aa] + Optim v0.22.0
[bac558e1] + OrderedCollections v1.3.1
[90014a1f] + PDMats v0.10.1
[d96e819e] + Parameters v0.12.1
[69de0a69] + Parsers v1.0.10
[2ae35dd2] + Permutations v0.4.0
[f27b6e38] + Polynomials v1.1.9
[85a6dd25] + PositiveFactorizations v0.2.3
[8162dcfd] + PrettyPrint v0.2.0
[08abe8d2] + PrettyTables v0.9.1
[27ebfcd6] + Primes v0.5.0
[92933f4c] + ProgressMeter v1.4.0
[1fd47b50] + QuadGK v2.4.1
[3cdcf5f2] + RecipesBase v1.1.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.1.0
[37e2e3b7] + ReverseDiff v1.4.3
[286e9d63] + RingLists v0.2.6
[79098fc4] + Rmath v0.6.1
[f50d1b31] + Rmath_jll v0.2.2+1
[f2b01f46] + Roots v1.0.5
[21efa798] + SIMDPirates v0.8.25
[476501e8] + SLEEFPirates v0.5.5
[321657f4] + ScientificTypes v1.1.0
[efcf1570] + Setfield v0.7.0
[55797a34] + SimpleGraphs v0.7.4
[ec83eff0] + SimplePartitions v0.3.0
[cc47b68c] + SimplePolynomials v0.2.4
[b2aef97b] + SimplePosets v0.1.4
[a6525b86] + SimpleRandom v0.2.1
[a2af1166] + SortingAlgorithms v0.3.1
[8ce77f84] + Soss v0.15.2
[cf2dc0df] + SossMLJ v0.1.0
[276daf66] + SpecialFunctions v0.10.3
[90137ffa] + StaticArrays v0.12.4
[2913bbd2] + StatsBase v0.33.1
[4c63d2b9] + StatsFuns v0.9.5
[856f2bd8] + StructTypes v1.1.0
[cea106d9] + Syslogs v0.3.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.1.0
[f269a46b] + TimeZones v1.4.0
[3bb67fe8] + TranscodingStreams v0.9.5
[84d833dd] + TransformVariables v0.3.10
[3a884ed6] + UnPack v1.0.2
[3d5dd08c] + VectorizationBase v0.12.33
[02c8fc9c] + XML2_jll v2.9.10+2
[83775a58] + Zlib_jll v1.2.11+16
[700de1a5] + ZygoteRules v0.2.0
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building TimeZones ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/2c48caca8f3912857973590a9757e1f86cbbff81/build.log`
Building SLEEFPirates → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/67ae90a18aa8c22bf159318300e765fbd89ddf6e/build.log`
Testing SossMLJ
Status `/tmp/jl_qhyKE0/Project.toml`
[324d7699] CategoricalArrays v0.8.3
[a93c6f00] DataFrames v0.21.7
[31c24e10] Distributions v0.23.8
[e30172f5] Documenter v0.25.2
[98b081ad] Literate v2.7.0
[a7f614a8] MLJBase v0.15.2
[e80e1ace] MLJModelInterface v0.3.5
[0987c9cc] MonteCarloMeasurements v0.9.7
[872c559c] NNlib v0.7.5
[d9ec5142] NamedTupleTools v0.13.6
[ce6b1742] RDatasets v0.6.10
[8ce77f84] Soss v0.15.2
[cf2dc0df] SossMLJ v0.1.0
[bd369af6] Tables v1.1.0
[9a3f8284] Random
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_qhyKE0/Manifest.toml`
[398f06c4] AbstractLattices v0.2.1
[79e6a3ab] Adapt v2.3.0
[0bf59076] AdvancedHMC v0.2.25
[dce04be8] ArgCheck v2.1.0
[4fba245c] ArrayInterface v2.13.3
[4c555306] ArrayLayouts v0.3.8
[fbb218c0] BSON v0.2.6
[6e4b80f9] BenchmarkTools v0.5.0
[76274a88] Bijectors v0.8.6
[336ed68f] CSV v0.7.7
[49dc2e85] Calculus v0.5.1
[a603d957] CanonicalTraits v0.2.2
[324d7699] CategoricalArrays v0.8.3
[082447d4] ChainRules v0.7.22
[d360d2e6] ChainRulesCore v0.9.11
[944b1d66] CodecZlib v0.7.0
[3da002f7] ColorTypes v0.10.9
[861a8166] Combinatorics v1.0.2
[bbf7d656] CommonSubexpressions v0.3.0
[34da2185] Compat v3.18.0
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Testing Running tests...
┌ Warning: `setindex!(df::DataFrame, v::AbstractVector, col_ind::ColumnIndex)` is deprecated, use `begin
│ df[!, col_ind] = v
│ df
│ end` instead.
│ caller = top-level scope at runtests.jl:17
└ @ Core ~/.julia/packages/SossMLJ/Mdzvy/test/runtests.jl:17
┌ Warning: `setindex!(df::DataFrame, v::AbstractVector, col_ind::ColumnIndex)` is deprecated, use `begin
│ df[!, col_ind] = v
│ df
│ end` instead.
│ caller = top-level scope at runtests.jl:18
└ @ Core ~/.julia/packages/SossMLJ/Mdzvy/test/runtests.jl:18
[ Info: Running /home/pkgeval/.julia/packages/SossMLJ/Mdzvy/examples/example-linear-regression.jl
[ Info: Training [34mMachine{SossMLJModel{,…}} @468[39m.
Evaluating over 6 folds: 17%%[====> ] ETA: 0:00:41[KEvaluating over 6 folds: 33%%[========> ] ETA: 0:00:32[KEvaluating over 6 folds: 50%%[============> ] ETA: 0:00:24[KEvaluating over 6 folds: 67%%[================> ] ETA: 0:00:15[KEvaluating over 6 folds: 83%%[====================> ] ETA: 0:00:08[KEvaluating over 6 folds: 100%%[=========================] Time: 0:00:45[K
Evaluating over 6 folds: 17%%[====> ] ETA: 0:00:38[KEvaluating over 6 folds: 33%%[========> ] ETA: 0:00:30[KEvaluating over 6 folds: 50%%[============> ] ETA: 0:00:23[KEvaluating over 6 folds: 67%%[================> ] ETA: 0:00:15[KEvaluating over 6 folds: 83%%[====================> ] ETA: 0:00:07[KEvaluating over 6 folds: 100%%[=========================] Time: 0:00:44[K
[ Info: Running /home/pkgeval/.julia/packages/SossMLJ/Mdzvy/test/extra-example-tests/linear-regression.jl
Evaluating over 6 folds: 17%%[====> ] ETA: 0:00:38[KEvaluating over 6 folds: 33%%[========> ] ETA: 0:00:30[KEvaluating over 6 folds: 50%%[============> ] ETA: 0:00:23[KEvaluating over 6 folds: 67%%[================> ] ETA: 0:00:15[KEvaluating over 6 folds: 83%%[====================> ] ETA: 0:00:08[KEvaluating over 6 folds: 100%%[=========================] Time: 0:00:45[K
[ Info: Running /home/pkgeval/.julia/packages/SossMLJ/Mdzvy/examples/example-multinomial-logistic-regression.jl
[ Info: Training [34mMachine{SossMLJModel{,…}} @538[39m.
size(predictor_marginal) = (150,)
size(iris, 1) = 150
Evaluating over 4 folds: 25%%[======> ] ETA: 0:02:47[KEvaluating over 4 folds: 50%%[============> ] ETA: 0:01:52[KEvaluating over 4 folds: 75%%[==================> ] ETA: 0:00:56[KEvaluating over 4 folds: 100%%[=========================] Time: 0:03:43[K
Evaluating over 4 folds: 25%%[======> ] ETA: 0:02:58[KEvaluating over 4 folds: 50%%[============> ] ETA: 0:01:54[KEvaluating over 4 folds: 75%%[==================> ] ETA: 0:00:59[KEvaluating over 4 folds: 100%%[=========================] Time: 0:03:45[K
[ Info: Running /home/pkgeval/.julia/packages/SossMLJ/Mdzvy/test/extra-example-tests/multinomial-logistic-regression.jl
Evaluating over 4 folds: 25%%[======> ] ETA: 0:03:03[KEvaluating over 4 folds: 50%%[============> ] ETA: 0:02:05[KEvaluating over 4 folds: 75%%[==================> ] ETA: 0:01:02[KEvaluating over 4 folds: 100%%[=========================] Time: 0:04:17[K
[ Info: SetupBuildDirectory: setting up build directory.
[ Info: Doctest: running doctests.
[ Info: Skipped ExpandTemplates step (doctest only).
[ Info: Skipped CrossReferences step (doctest only).
[ Info: Skipped CheckDocument step (doctest only).
[ Info: Skipped Populate step (doctest only).
[ Info: Skipped RenderDocument step (doctest only).
Test Summary: | Pass Total
SossMLJ.jl | 40 40
Testing SossMLJ tests passed