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Bump conda #86

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khkk378 opened this issue May 19, 2021 · 2 comments
Closed

Bump conda #86

khkk378 opened this issue May 19, 2021 · 2 comments

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@khkk378
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khkk378 commented May 19, 2021

Hi! Would you consider bumping the bioconda package? It doesn't really fit the documentation anymore. Thanks!

Cheers,
Rasmus

@KevinMenden
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KevinMenden commented May 19, 2021

hi @khkk378 ,

do you need the bioconda package, or can you use pip instead? (can still install inside a conda environment)
There are some issues with the bioconda recipe that I could not solve. I have mentioned this in the documention somewhere. Probably I should remove the mention of bioconda altogether for now...

Maybe it's time I gave it another try....

@khkk378
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khkk378 commented May 19, 2021

Conda is so convenient, so it you can get it to work it would be welcome :) Otherwise I think drop it, because it's confusing as is now when the documentation doesn't match the functionality. I tried installing with pip, but for some reason it started to download every single version of numpy. I will use conda and for your dependencies and then just install scaden with pip.

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