diff --git a/docs/tutorials/tut02_cluster.rst b/docs/tutorials/tut02_cluster.rst index b442034..18fbe4e 100644 --- a/docs/tutorials/tut02_cluster.rst +++ b/docs/tutorials/tut02_cluster.rst @@ -39,11 +39,9 @@ Now that we have all the input files for the clustering workflow we can get star napari your_tomo_a10.mrc -Next open the napari-tomotwin clustering tool via :guilabel:`Plugins` -> :guilabel:`napari-tomotwin` -> :guilabel:`Cluster UMAP embeddings`. Then choose the :guilabel:`Path to UMAP` by clicking on :guilabel:`Select file` and provide the path to your :file:`your_tomo_a10_embeddings.tumap`. +Next open the napari-tomotwin clustering tool via :guilabel:`Plugins` -> :guilabel:`TomoTwin clustering workflow`. Then choose the :guilabel:`Path to UMAP` by clicking on :guilabel:`Select file` and provide the path to your :file:`your_tomo_a10_embeddings.tumap`. Click :guilabel:`Load` and a 2D plot of the umap embeddings should appear in the plugin window. It will do some calculating in the background and might take a few seconds. -The other buttons :guilabel:`Recalculate UMAP for selected clusters` and :guilabel:`Show target embedding positions` will be described in the next section. - 5. Find target cluster ----------------------