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Any plan to make it compatible with minimap2 output? #5

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ghost opened this issue Nov 12, 2020 · 1 comment

ghost commented Nov 12, 2020

Hello,

question in title ^^'

Other plotting tools gave me multiple cancers. Dot is very very cool, so it would be even cooler if it could accomodate easily minimap2 sam file.

Just a suggestion though.

thanks!

sheinasim commented Sep 23, 2021

Hello,

question in title ^^'

Other plotting tools gave me multiple cancers. Dot is very very cool, so it would be even cooler if it could accomodate easily minimap2 sam file.

Just a suggestion though.

thanks!

Convert a .sam output from minimap2 to .delta using a python script I found here https://gist.github.com/malonge/a05da7f99e651ea55e8a4e57a5c4aab1

I hope this works for you!
Sheina

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