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agat_sp_extract_sequence.pl #24

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Juke34 opened this issue Feb 27, 2020 · 0 comments
Closed

agat_sp_extract_sequence.pl #24

Juke34 opened this issue Feb 27, 2020 · 0 comments

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@Juke34
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Juke34 commented Feb 27, 2020

Deal with sequence <3 because othwise we get empty sequence.
e.g

I       ensembl exon    224563  224862  .       -       .       Parent=YAR070C;exon_id=YAR070C.1;exon_number=1;exon_version=1;gene_biotype=protein_coding;gen$
I       ensembl CDS     224563  224565  .       -       0       Parent=YAR070C;exon_number=1;gene_biotype=protein_coding;gene_name=YAR070C;gene_source=ensemb$
@Juke34 Juke34 closed this as completed in 4651f79 Mar 10, 2020
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