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run_test.yml
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name: ZMat CI
on: [push, pull_request]
jobs:
octave_test:
name: Octave tests
strategy:
# tested octave versions: ubuntu-20.04 = 5.2, ubuntu-22.04 = 6.4, macos-11 = 8.1, windows-2019 = 8.3
matrix:
os: [ubuntu-20.04, ubuntu-22.04, macos-11, windows-2019]
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash
steps:
- name: Checkout repo
uses: actions/checkout@v3
with:
submodules: 'recursive'
- name: Install dependencies
run: |
if [[ "$RUNNER_OS" == "Linux" ]]; then
sudo apt-get update && sudo apt-get install -y liboctave-dev valgrind
curl --retry 3 -kL https://github.com/upx/upx/releases/download/v4.1.0/upx-4.1.0-amd64_linux.tar.xz --output upx.tar.xz
tar -xvf upx.tar.xz
sudo mv upx-4.1.0-amd64_linux/upx /usr/bin
rm -rf upx-4.1.0-amd64_linux upx.tar.xz
fi
[[ "$RUNNER_OS" == "macOS" ]] && brew install octave upx
if [[ "$RUNNER_OS" == "Windows" ]]; then
choco install upx
which upx
curl --retry 3 -kL http://cdimage.debian.org/mirror/gnu.org/gnu/octave/windows/octave-8.3.0-w64-64.7z --output octave_8.3.0.7z
7z x octave_8.3.0.7z -ooctave -y
echo 'C:\msys64\mingw64\bin' >> $GITHUB_PATH
echo "$PWD/octave/octave-8.3.0-w64-64/mingw64/bin" >> $GITHUB_PATH
fi
- name: Install msys2 libraries (Windows only)
if: ${{ runner.os == 'Windows' }}
uses: msys2/setup-msys2@v2
with:
update: true
install: >-
mingw-w64-x86_64-gcc
mingw-w64-x86_64-zlib
mingw-w64-x86_64-winpthreads-git
base-devel
- name: Build static library
run: |
which gcc
which g++
make -C src lib CC=gcc CXX=g++
make -C example/c all CC=gcc CXX=g++ LIBTYPE=
if [ "$RUNNER_OS" == "macOS" ]; then
DYLD_LIBRARY_PATH=lib example/c/testzmat;
else
LD_LIBRARY_PATH=lib example/c/testzmat;
fi
octave-cli --eval "fprintf(1,['OCTAVE_ARCH=' regexprep(computer('arch'), 'darwin[0-9.]+-', 'darwin-')])"
octave-cli --eval "fprintf(1,['OCTAVE_ARCH=' regexprep(computer('arch'), 'darwin[0-9.]+-', 'darwin-')])" >> $GITHUB_ENV
- name: Build dynamic library
run: |
make -C src dll CC=gcc CXX=g++
make -C example/c all CC=gcc CXX=g++ LIBTYPE=
if [ "$RUNNER_OS" == "macOS" ]; then
DYLD_LIBRARY_PATH=lib example/c/testzmat;
else
LD_LIBRARY_PATH=lib example/c/testzmat;
fi
- name: Build octave mex (Windows only)
if: ${{ runner.os == 'Windows' }}
shell: msys2 {0}
run: |
export PATH="/mingw64/bin":"$PWD/octave/octave-8.3.0-w64-64/mingw64/bin":$PATH
which gcc
gcc -v
make -C src oct CC=gcc CXX=g++ USERLINKOPT="-static-libgcc -static-libstdc++ -fstack-protector -L/mingw64/lib -Wl,-Bstatic -lz -lwinpthread -Wl,-Bdynamic -v -s '$PWD/octave/octave-8.3.0-w64-64/mingw64/lib/octave/8.3.0/liboctinterp.dll.a'"
objdump -p zipmat.mex | grep "DLL Name:"
strip zipmat.mex
echo "$PWD/octave/octave-8.3.0-w64-64/mingw64/bin" >> $GITHUB_PATH
- name: Compress octave mex (Windows only)
if: ${{ runner.os == 'Windows' }}
run: upx -9 zipmat.mex || true
- name: Build octave mex (Linux and Mac)
if: ${{ runner.os != 'Windows' }}
run: |
gcc -v
if [ "$RUNNER_OS" == "macOS" ]; then
make -C src oct CC=gcc CXX=g++ MEXLINKOPT="-static" USERLINKOPT="-v -s"
otool -L zipmat.mex
upx -9 zipmat.mex || true
else
make -C src oct CC=gcc CXX=g++ MEXLINKOPT="-static-libgcc -static-libstdc++ -Wl,-Bstatic -lm -lpthread -Wl,-Bdynamic" USERLINKOPT="-v -s"
ldd zipmat.mex
fi
strip -S zipmat.mex
upx -9 zipmat.mex || true
- name: Run octave test
if: ${{ runner.os != 'Linux' }}
run: |
octave-cli --version
if [ "$RUNNER_OS" == "Windows" ]; then
export PATH="$PWD/octave/octave-8.3.0-w64-64/mingw64/bin":$PATH
fi
octave-cli --eval "addpath(pwd);cd test;run_zmat_test;cd ../example;demo_zmat_basic;zmat_speedbench"
- name: Run octave test
if: ${{ runner.os == 'Linux' }}
run: |
octave-cli --version
valgrind octave-cli --eval "addpath(pwd);cd test;run_zmat_test;cd ../example;demo_zmat_basic"
octave-cli --eval "addpath(pwd);cd example;zmat_speedbench"
- name: Create package folder
run: |
mkdir packages
mkdir zmat
mkdir -p zmat/octave/${{ env.OCTAVE_ARCH }}
cp *.{m,txt,rst} zmat/
cp PKG_ADD* zmat/
cp INDEX zmat/
cp DESCRIPTION zmat/
cp COPYING zmat/
cp -a example zmat/
cp -a test zmat/
- name: Create release tag
run: perl -e "print 'RELEASE_TAG='. lc('${{ runner.os }}-${{ runner.arch }}-github-latest')" >> $GITHUB_ENV
- name: Zip zmat
run: |
mv zipmat.mex zmat/octave/${{ env.OCTAVE_ARCH }}
if [[ "$RUNNER_OS" == "Windows" ]]; then
7z a -tzip packages/zmat-octave-${{ env.RELEASE_TAG }}.zip zmat
else
zip -FSr --symlink packages/zmat-octave-${{ env.RELEASE_TAG }}.zip zmat
fi
- name: Upload zmat package
if: ${{ matrix.os == 'ubuntu-20.04' || matrix.os == 'macos-11' || matrix.os == 'windows-2019' }}
uses: actions/upload-artifact@v3
with:
name: all-zmat-packages
path: packages/zmat-octave-${{ env.RELEASE_TAG }}.zip
matlab_test:
name: MATLAB test
strategy:
matrix:
os: [ubuntu-20.04, macos-11, windows-2019]
defaults:
run:
shell: bash
runs-on: ${{ matrix.os }}
steps:
- name: Checkout repo
uses: actions/checkout@v3
with:
submodules: 'recursive'
- name: Install dependencies
run: |
if [[ "$RUNNER_OS" == "Linux" ]]; then
curl --retry 3 -kL https://github.com/upx/upx/releases/download/v4.1.0/upx-4.1.0-amd64_linux.tar.xz --output upx.tar.xz
tar -xvf upx.tar.xz
sudo mv upx-4.1.0-amd64_linux/upx /usr/bin || true
rm -rf upx-4.1.0-amd64_linux upx.tar.xz || true
fi
[[ "$RUNNER_OS" == "macOS" ]] && brew install upx
[[ "$RUNNER_OS" == "Windows" ]] && choco install upx
echo "installed upx"
- name: Set up MATLAB
uses: matlab-actions/setup-matlab@v1
- name: Install msys2 libraries (Windows only)
if: ${{ runner.os == 'Windows' }}
uses: msys2/setup-msys2@v2
with:
update: true
install: >-
mingw-w64-x86_64-gcc
mingw-w64-x86_64-zlib
mingw-w64-x86_64-winpthreads-git
base-devel
- name: Set up mex gcc (Windows only)
if: ${{ runner.os == 'Windows' }}
run: |
echo 'MW_MINGW64_LOC=/c/msys64/mingw64' >> $GITHUB_ENV
echo 'COMPFLAGS=""' >> $GITHUB_ENV
- name: Build MATLAB mex
run: |
rm -rf private
if [[ "$RUNNER_OS" == "Windows" ]]; then
make -C src mex CC=gcc CXX=g++ MEX="cmd //s //c mex -f mexopts_msys2_gcc.xml " USERLINKOPT="-v " CXXLIBS="-Lblosc2/lib -L/blosc2/internal-complibs/zstd-1.5.2"
objdump -p zipmat.mexw* | grep "DLL Name:"
elif [[ "$RUNNER_OS" == "macOS" ]]; then
make -C src mex CC=gcc-10 CXX=g++10 MEXLINKOPT="-static-libstdc++"
otool -L zipmat.mex*
upx -9 zipmat.mex* || true
else
make -C src mex CC=gcc CXX=g++ MEXLINKOPT="-static-libgcc -static-libstdc++ -Wl,-Bstatic -lz -Wl,-Bdynamic" MEX="mex -v"
ldd zipmat.mex*
fi
strip -S zipmat.mex*
upx -9 zipmat.mex* || true
- name: Run MATLAB examples
uses: matlab-actions/run-command@v1
with:
command: addpath(pwd);cd test;run_zmat_test;cd ../example;demo_zmat_basic;zmat_speedbench
- name: Create package folder
run: |
mkdir packages
mkdir zmat
mkdir -p zmat/private
mkdir -p zmat/example
cp *.{m,txt,rst} zmat/
cp -a example/*.m zmat/example
cp -a test zmat/
- name: Create release tag
run: perl -e "print 'RELEASE_TAG='. lc('${{ runner.os }}-${{ runner.arch }}-github-latest')" >> $GITHUB_ENV
- name: Zip zmat
run: |
mv zipmat.mex* zmat/private
if [[ "$RUNNER_OS" == "Windows" ]]; then
7z a -tzip packages/zmat-matlab-${{ env.RELEASE_TAG }}.zip zmat
else
zip -FSr --symlink packages/zmat-matlab-${{ env.RELEASE_TAG }}.zip zmat
fi
- name: Upload zmat package
if: ${{ matrix.os == 'ubuntu-20.04' || matrix.os == 'macos-11' || matrix.os == 'windows-2019' }}
uses: actions/upload-artifact@v3
with:
name: all-zmat-packages
path: packages/zmat-matlab-${{ env.RELEASE_TAG }}.zip
upload_package:
name: Upload Packages
needs: [octave_test, matlab_test]
runs-on: ubuntu-20.04
if: ${{ github.repository_owner == 'NeuroJSON' && github.event_name != 'pull_request'}}
steps:
- name: Download zmat
uses: actions/download-artifact@v3
with:
name: all-zmat-packages
path: packages
- name: Create all-in-one zmat package
run: |
cd packages
unzip -n 'zmat*.zip'
rm -rf zmat/example/c/testzmat.exe zmat/example/c/testzmat zmat/example/c/testzmat.dSYM
tree .
zip -FSr --symlink zmat-allinone-github-latest.zip zmat
rm -rf zmat
- name: Display structure of downloaded files
run: ls -R packages
- name: Copy package to server
if: ${{ github.repository_owner == 'NeuroJSON' && github.event_name != 'pull_request'}}
uses: wlixcc/SFTP-Deploy-Action@v1.2.4
with:
server: ${{ secrets.MCX_SERVER }}
username: ${{ secrets.MCX_SERVER_USER }}
ssh_private_key: ${{ secrets.MCX_SERVER_SSH_KEY }}
local_path: "packages/zmat-allinone-github-latest.zip"
remote_path: ${{ secrets.MCX_CI_PATH }}