dev_env_setup.md

CellCycleNet Dev Env Setup

Installation of GitHub repo package via conda

1. Make sure you have conda installed.

2. Install Mamba to facilitate installation of GPU-enabled dependencies:

$ conda install -n base -c conda-forge mamba

3. Clone this repo, then create the provided conda environment.

$ cd CellCycleNet
$ mamba env create -f envs/dev_env.yml

4. Activate the new conda environment and install cellcyclenet:

$ conda activate ccn_dev_env
$ pip install .