PCAviz.Rcheck log

[ChiChunLiu]

• using log directory ‘/home/chi-chun/Desktop/PCAviz.Rcheck’
• using R version 3.4.2 (2017-09-28)
• using platform: x86_64-pc-linux-gnu (64-bit)
• using session charset: UTF-8
• using option ‘--as-cran’
• checking for file ‘PCAviz/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘PCAviz’ version ‘0.3-27’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... NOTE
  Maintainer: ‘John Novembre jnovembre@uchicago.edu’

New submission

The Date field is over a month old.

Size of tarball: 56397081 bytes

• checking package namespace information ... OK

• checking package dependencies ... OK

• checking if this is a source package ... OK

• checking if there is a namespace ... OK

• checking for executable files ... OK

• checking for hidden files and directories ... OK

• checking for portable file names ... OK

• checking for sufficient/correct file permissions ... OK

• checking whether package ‘PCAviz’ can be installed ... OK

• checking installed package size ... NOTE
  installed size is 129.5Mb
  sub-directories of 1Mb or more:
  data 2.4Mb
  doc 2.8Mb
  original-demos 4.8Mb
  original-files 117.3Mb

• checking package directory ... OK

• checking ‘build’ directory ... OK

• checking DESCRIPTION meta-information ... OK

• checking top-level files ... NOTE
  File
  LICENSE
  is not mentioned in the DESCRIPTION file.
  Non-standard files/directories found at top level:
  ‘NOTES.md’ ‘_pkgdown.yaml’ ‘docs’

• checking for left-over files ... OK

• checking index information ... OK

• checking package subdirectories ... OK

• checking R files for non-ASCII characters ... OK

• checking R files for syntax errors ... OK

• checking whether the package can be loaded ... OK

• checking whether the package can be loaded with stated dependencies ... OK

• checking whether the package can be unloaded cleanly ... OK

• checking whether the namespace can be loaded with stated dependencies ... OK

• checking whether the namespace can be unloaded cleanly ... OK

• checking loading without being on the library search path ... OK

• checking use of S3 registration ... OK

• checking dependencies in R code ... OK

• checking S3 generic/method consistency ... OK

• checking replacement functions ... OK

• checking foreign function calls ... OK

• checking R code for possible problems ... OK

• checking Rd files ... OK

• checking Rd metadata ... OK

• checking Rd line widths ... OK

• checking Rd cross-references ... OK

• checking for missing documentation entries ... OK

• checking for code/documentation mismatches ... OK

• checking Rd \usage sections ... OK

• checking Rd contents ... OK

• checking for unstated dependencies in examples ... OK

• checking contents of ‘data’ directory ... OK

• checking data for non-ASCII characters ... OK

• checking data for ASCII and uncompressed saves ... OK

• checking installed files from ‘inst/doc’ ... OK

• checking files in ‘vignettes’ ... OK

• checking examples ... OK

• checking for unstated dependencies in ‘tests’ ... OK

• checking tests ... ERROR
  Running ‘testthat.R’
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:

  library(testthat)
  library(PCAviz)
  test_check("PCAviz")

  1. Failure: plot.pcaviz(plotly = TRUE) generates interactive plot from Iris data without error (@test_pcaviz.R#165)
     plot(iris, plotly = TRUE, tooltip = "id") produced messages.

  testthat results ================================================================
  OK: 23 SKIPPED: 0 FAILED: 1

  1. Failure: plot.pcaviz(plotly = TRUE) generates interactive plot from Iris data without error (@test_pcaviz.R#165)

  Error: testthat unit tests failed
  Execution halted

• checking for unstated dependencies in vignettes ... OK

• checking package vignettes in ‘inst/doc’ ... OK

• checking re-building of vignette outputs ... OK

• checking PDF version of manual ... OK

• DONE
  Status: 1 ERROR, 3 NOTEs

[pcarbo]

@ChiChunLiu Some files are missing from this repository… where are .gitignore and .Rbuildignore?