MNE-Python based tool for generating quality check reports from MEG recordings.
This tool can be run as a stand alone script without direct installation but the dependancies in the requirements.txt file must be installed in the present environment. These can be installed using pip
pip install -r requirements.txt
The script runs from the command line with two positional arguments
positional arguments:
files plain text file containing full paths to files to be processed
outdir Path to output directory to save data in
optional arguments:
-h, --help show this help message and exit
for example:
python ohba_meg_qc.py my_list_of_meg_files.txt /full/path/to/my/output_directory