bump up version

README.md

@@ -11,7 +11,7 @@
 [![Anaconda Downloads](https://anaconda.org/aleg/pycometh/badges/downloads.svg)](https://anaconda.org/aleg/pycometh)
 
 ---
-Version in this branch: 2.0.0
+Version in this branch: 2.0.1
 
 ---
 

deploy.sh

@@ -1,14 +1,26 @@
 #!/bin/bash
 # -*- coding: utf-8 -*-
 
+repostring=""
+if [[ $# -eq 1 ]]; then
+    if [ "$1" = "test" ]; then
+        repostring="--repository testpypi"
+    fi
+fi
+
 echo "compile package from setup.py"
 python setup.py sdist
 
 echo "Uploading to pypi..."
-twine upload dist/*
+twine upload $repostring dist/*
+
+if [[ ! -z $repostring ]]; then
+	echo "Testing complete - not attempting to upload to conda"
+	exit
+fi
 
 echo "Build noarch package for conda..."
-conda-build meta.yaml --python 3.7 --output-folder conda_build -c bioconda -c conda-forge --no-include-recipe
+conda-build meta.yaml --python 3.7 --output-folder conda_build -c bioconda -c conda-forge -c plotly -c snajder-r --no-include-recipe
 
 echo "Logging in to conda..."
 anaconda login

meta.yaml

@@ -1,4 +1,4 @@
-{% set version = "2.0.0" %}
+{% set version = "2.0.1" %}
 {% set name = "pycoMeth" %}
 
 package:
@@ -31,8 +31,7 @@ requirements:
     - tqdm>=4.60.0
     - colorlog>=4.1.0
     - nbformat>=4.2.0
-    - meth5==1.0.0
-    - kaleido
+    - meth5>=1.0.0
 
 test:
   imports:

pycoMeth/__init__.py

@@ -1,5 +1,5 @@
 # -*- coding: utf-8 -*-
 
 # Define self package variable
-__version__ = "2.0.0"
+__version__ = "2.0.1"
 __description__ = "Differential methylation calling suite for Nanopore methylation calls PycoMeth"

setup.py

@@ -13,7 +13,7 @@
 setup(
     name=name,
     description="Differential methylation calling suite for Nanopore methylation calls PycoMeth",
-    version="2.0.0",
+    version="2.0.1",
     long_description=long_description,
     long_description_content_type="text/markdown",
     url="https://github.com/snajder-r/pycoMeth,",
@@ -39,8 +39,7 @@
         "tqdm>=4.60.0",
         "colorlog>=4.1.0",
         "nbformat>=4.2.0",
-        "meth5==1.0.0",
-        "kaleido"
+        "meth5>=1.0.0"
     ],
     packages=["pycoMeth", "pycoMeth.meth_seg"],
     package_dir={"pycoMeth": "pycoMeth", "pycoMeth.meth_seg":"pycoMeth/meth_seg"},

versipy.yaml

@@ -1,7 +1,7 @@
 version:
   major: 2
   minor: 0
-  micro: 0
+  micro: 1
   a: null
   b: null
   rc: null
@@ -30,7 +30,7 @@ managed_values:
   - tqdm>=4.60.0
   - colorlog>=4.1.0
   - nbformat>=4.2.0
-  - meth5==1.0.0
+  - meth5>=1.0.0
   - kaleido
   __classifiers__:
   - 'Development Status :: 4 - Beta'

versipy_history.txt

@@ -24,3 +24,5 @@
 2022-02-16 16:11:36.848556	2.0.0	Manually set version
 2022-02-16 16:14:38.076678	2.0.0	Manually set version
 2022-02-16 16:17:05.090660	2.0.0	Manually set version
+2022-02-16 16:39:30.376184	2.0.0	Manually set version
+2022-02-16 16:40:39.349922	2.0.1	Versipy auto bump-up