QSIRecon borrows heavily from fMRIPrep to build workflows for reconstructing q-space images such as Diffusion Spectrum Images (DSI), multi-shell HARDI and compressed sensing DSI (CS-DSI). QSIRecon can reconstruct orientation distribution functions (ODFs), fiber orientation distributions (FODs) and perform tractography, estimate anisotropy scalars and connectivity estimation using a combination of Dipy, MRTrix and DSI Studio using a JSON-based pipeline specification.
Since QSIRecon uses the fMRIPrep workflow-building strategy, it can also generate methods boilerplate and quality-check figures.
[Documentation qsirecon.org]