diff --git a/qsirecon/workflows/recon/anatomical.py b/qsirecon/workflows/recon/anatomical.py index 46bbe7f0..97e8f17f 100644 --- a/qsirecon/workflows/recon/anatomical.py +++ b/qsirecon/workflows/recon/anatomical.py @@ -137,6 +137,7 @@ def init_highres_recon_anatomical_wf( seg="hsvs", space="T1w", suffix="probseg", + extension=".nii.gz", compress=True, ), name="ds_qsiprep_5tt_hsvs",