Repository containg the code and notebooks to reproduce the results of the paper "Using Adjusted Local Assortativity with Molecular Pixelation unveils colocalization of membrane proteins with immunological significance".
The repo contains both the folder colocalization_measures with a series of Python scripts creating the scores of the paper and the notebooks used for plotting and explaining the use of the functions.
If you are using this data or method in your research, please cite the publication as follows:
Rhomberg-Kauert J, Karlsson M, Thiagarajan D, Kallas T, Karlsson F, Fredriksson S, Dahlberg J and Martinez Barrio A (2024)
Using adjusted local assortativity with Molecular Pixelation unveils colocalization of membrane proteins with immunological significance.
Front. Immunol. 15:1309916. doi: 10.3389/fimmu.2024.1309916