Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

NTR: microbe #74

Closed
ramonawalls opened this issue Jul 30, 2019 · 6 comments
Closed

NTR: microbe #74

ramonawalls opened this issue Jul 30, 2019 · 6 comments

Comments

@ramonawalls
Copy link
Contributor

This term is being moved to PCO from OHMI

Preferred term label

microbe

Synonyms

microbial organism

Textual definition

An organism or virus or viroid that is too small to be viewed by the unaided eye.

Logical definition

'organism or virus or viroid'
and ('has quality' some 'invisible to unaided eye')

Suggested parent term

organism or virus or viroid (will soon be replaced by "organism" from CORE)

Attribution

@zhengj2007 and @yongqunh please supply your ORCIDs so I can include them.

@ramonawalls
Copy link
Contributor Author

Will need to add new quality invisible to the naked eye, which should eventually go into PATO.
def: A physical object quality that is inhered in a material entity that is too small to be viewed by the unaided eye.

@ramonawalls
Copy link
Contributor Author

Needed to define microbial collections of organisms, per issue #73.

@ramonawalls
Copy link
Contributor Author

@pbuttigieg Please let us know if you want any changes to this one or #73. We should include you as a contributor as well.

@zhengj2007
Copy link
Collaborator

@ramonawalls my ORCID is 0000-0002-2999-0103. Thanks!

@ramonawalls
Copy link
Contributor Author

@cmungall, in EnvironmentOntology/envo#781 you suggested including non-monophyletic groups in NCBITaxon. Would that be the appropriate home for this microbe class?

@cmungall
Copy link

Different namespace, but it could be built as part of the obo ncbitaxon releases, and released as an optional extension

but I think this should be reserved for things that can be logically defined using or/and/not with existing taxo... this one feels odd let's discuss later

@ramonawalls ramonawalls added this to the August 2019 release milestone Aug 27, 2019
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

3 participants