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haeussma committed Jun 21, 2024
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222 changes: 222 additions & 0 deletions graph-network/graph-network/populate.ipynb
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26 changes: 13 additions & 13 deletions graph-network/ttl/A0B742.ttl
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@prefix ns1: <http://semanticscience.org/resource/> .
@prefix ns2: <http://edamontology.org/> .
@prefix ns1: <http://edamontology.org/> .
@prefix ns2: <http://semanticscience.org/resource/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/A0B742> a <https://github.com/PyEED/pyeed/ProteinRecord> ;
ns2:data_1011 "2.5.1.6" ;
ns2:data_1505 4.4179e+04 ;
ns1:SIO_000030 "MTRNIRVEELTQRPVEKQKIEVVERKGLGHPDSVADGIAEEISRALCKEYIERFGRVLHHNTDKIQIVAGRSRPAFGGGEVIQPQYILLTGRATRVCGDVEVPVDAIALRTARNHLKRALRNLDLDTHVIIDCKIGTGSADLCDIFDRDASTVPSANDTSYGVGYAPLSETERIVYSTEQELLSLRSRIPAIGEDIKVMGLREDDTIYLTIACAMVDRYIDDLDHYVETKKEIVEEISAKAQSMTRRRVDVQMNVGDNIATGSVYITVTGTSAEMGDDGAVGRGNRANGLITPNRPMSLEATSGKNPINHVGKIYNLLSNLIAKEIAEEVDGVEEVYVKILSQIGKPISQPHIASVQLVLKEGVRLSSAHARAREITDRWLEDIPRVQQMIFHGELQTY" ;
ns1:SIO_000116 "S-adenosylmethionine synthase" ;
ns1:SIO_001390 () ;
ns1:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/66629a7e-64ca-473e-9f5c-041d7a7627d4> .
ns1:data_1011 "2.5.1.6" ;
ns1:data_1505 4.4179e+04 ;
ns2:SIO_000030 "MTRNIRVEELTQRPVEKQKIEVVERKGLGHPDSVADGIAEEISRALCKEYIERFGRVLHHNTDKIQIVAGRSRPAFGGGEVIQPQYILLTGRATRVCGDVEVPVDAIALRTARNHLKRALRNLDLDTHVIIDCKIGTGSADLCDIFDRDASTVPSANDTSYGVGYAPLSETERIVYSTEQELLSLRSRIPAIGEDIKVMGLREDDTIYLTIACAMVDRYIDDLDHYVETKKEIVEEISAKAQSMTRRRVDVQMNVGDNIATGSVYITVTGTSAEMGDDGAVGRGNRANGLITPNRPMSLEATSGKNPINHVGKIYNLLSNLIAKEIAEEVDGVEEVYVKILSQIGKPISQPHIASVQLVLKEGVRLSSAHARAREITDRWLEDIPRVQQMIFHGELQTY" ;
ns2:SIO_000116 "S-adenosylmethionine synthase" ;
ns2:SIO_001390 () ;
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/f7fe0832-92ab-4b56-b726-72214e27aaac> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/66629a7e-64ca-473e-9f5c-041d7a7627d4> a <https://github.com/PyEED/pyeed/Organism> ;
ns2:data_1179 349307 ;
ns2:data_1870 "Methanothrix" ;
ns2:data_2732 "Methanotrichaceae" ;
ns2:data_2909 "Methanothrix thermoacetophila PT" .
<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/f7fe0832-92ab-4b56-b726-72214e27aaac> a <https://github.com/PyEED/pyeed/Organism> ;
ns1:data_1179 349307 ;
ns1:data_1870 "Methanothrix" ;
ns1:data_2732 "Methanotrichaceae" ;
ns1:data_2909 "Methanothrix thermoacetophila PT" .

8 changes: 4 additions & 4 deletions graph-network/ttl/A1RSD7.ttl
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ns2:SIO_000030 "MIVIEKVDKTPVVKRLVEIVERKGQGHPDYIADGISEWVSRYLSRYYLEHFGIILHHNVDKTLVVGGQAAPRFGGGEVLQPIYILVSGRATYEVRTKDGVIKVPLGTLVMQAARDWIKQHFRFLDPDTHVVIDYKIGQGSADLVGIYDLGVKSVPLANDTSVGVGYAPLTPLEQLVYKTERLLNSRDFKAKYPEVGEDVKVMGVRVGKEVKLTVAAAMISKLVKDKSHYLSVKEDVKKAVEDLASKVAPEYNIEVVVNAADKPEHGIFYLTVTGTSAEHGDDGMTGRGNRANGLITPMRSMSLEAAAGKNPVSHVGKIYNVVAQRIADKVYNQVKDIIEVYVEIVSQIGKPINEPKILNVEIIKSGELTGEVRNEVEAIAREEIEKITQITDYILRGEVSLY" ;
ns2:SIO_000116 "S-adenosylmethionine synthase" ;
ns2:SIO_001390 ( <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_008701.1> ) ;
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/9e0ad649-359b-4108-a22f-f67effbcca83> .
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/aa1d4a0b-d74a-4103-a0bf-fd8a43f57ef0> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/9e0ad649-359b-4108-a22f-f67effbcca83> a <https://github.com/PyEED/pyeed/Organism> ;
<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_008701.1> a <https://github.com/PyEED/pyeed/Region> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/aa1d4a0b-d74a-4103-a0bf-fd8a43f57ef0> a <https://github.com/PyEED/pyeed/Organism> ;
ns1:data_1179 384616 ;
ns1:data_1870 "Pyrobaculum" ;
ns1:data_2732 "Thermoproteaceae" ;
ns1:data_2909 "Pyrobaculum islandicum DSM 4184" .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_008701.1> a <https://github.com/PyEED/pyeed/Region> .

4 changes: 2 additions & 2 deletions graph-network/ttl/A2BIZ8.ttl
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ns2:SIO_000030 "MPRNIVVESVKLQPVEEQSVELVERKGLGHPDTIADAAAEISSQYLSRYYIEKYGTILHHNLDKVLVVGGQAAPRFGGGEVLQPIYIIVSGRATTEVRLPDGKTERIPIGTIILRAVKEWIREKFRFLDPESHIIVDYKVGQGSADLVGIYELGKDSVPLANDTSVGVGFAPFSTLEQLVLETERLLNSKEFKEKNPEVGEDIKVMGLRRGRKIELTIAAAIISSLVQDLDHYLSVKEAIKEAVLDLASRIAPDYDVEVYVNTADKPDKGIVYITVTGTSAEHGDDGMTGRGNRSYGLITPLRPMSLEAAAGKNPVSHVGKIYNVMALNIARRIYDNVSGIREVYVKLLSQIGRPINDPLIANIKVVSEKPGEPLPSNALREIEAIVEEELDKYQELTKLFVEGKITIF" ;
ns2:SIO_000116 "S-adenosylmethionine synthase" ;
ns2:SIO_001390 ( <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_008818.1> ) ;
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/fb5aa768-5dc7-4fbd-b2e9-d9398d6186d5> .
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/a08d4dc9-67da-4e41-aa99-66d9ce608fb1> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_008818.1> a <https://github.com/PyEED/pyeed/Region> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/fb5aa768-5dc7-4fbd-b2e9-d9398d6186d5> a <https://github.com/PyEED/pyeed/Organism> ;
<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/a08d4dc9-67da-4e41-aa99-66d9ce608fb1> a <https://github.com/PyEED/pyeed/Organism> ;
ns1:data_1179 415426 ;
ns1:data_1870 "Hyperthermus" ;
ns1:data_2732 "Pyrodictiaceae" ;
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26 changes: 13 additions & 13 deletions graph-network/ttl/A3MY01.ttl
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@prefix ns1: <http://semanticscience.org/resource/> .
@prefix ns2: <http://edamontology.org/> .
@prefix ns1: <http://edamontology.org/> .
@prefix ns2: <http://semanticscience.org/resource/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/A3MY01> a <https://github.com/PyEED/pyeed/ProteinRecord> ;
ns2:data_1011 "2.5.1.6" ;
ns2:data_1505 4.4404e+04 ;
ns1:SIO_000030 "MIVVEKVDKIPTAKRLVEIVERKGQGHPDYIADGISEWVSRYLSRYYLEHFGVILHHNVDKTLVVGGQAAPKFGGGEVIQPIYIIVSGRATSEVKTKDGTVKIPLGTIVIQAARDWLKSHFRFLDPDVHTIIDYRIGQGSADLVGIYDLGVRGVPLANDTSVGVGYAPLTPLEELVYKTERLLNSRDFKSKYPEVGEDVKVMGVRVGKEVKLTVACAMISRLVKDKSHYISVKEDVKRAIEDLAAKIMPDYNVEVTVNAADKPEYDIFYLTVTGTSAEHGDDGMTGRGNKANGLITPMRSMSLEAAAGKNPVSHVGKIYNVVAQRIADRIYKEVKDVVEVYVEVVSQIGKPINEPKILNVEILSSGELTGELRREAEAIAKEEMDRITQVTELILRGEVSLY" ;
ns1:SIO_000116 "S-adenosylmethionine synthase" ;
ns1:SIO_001390 () ;
ns1:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/7324800e-f8ca-4690-abc9-72a2d45f990b> .
ns1:data_1011 "2.5.1.6" ;
ns1:data_1505 4.4404e+04 ;
ns2:SIO_000030 "MIVVEKVDKIPTAKRLVEIVERKGQGHPDYIADGISEWVSRYLSRYYLEHFGVILHHNVDKTLVVGGQAAPKFGGGEVIQPIYIIVSGRATSEVKTKDGTVKIPLGTIVIQAARDWLKSHFRFLDPDVHTIIDYRIGQGSADLVGIYDLGVRGVPLANDTSVGVGYAPLTPLEELVYKTERLLNSRDFKSKYPEVGEDVKVMGVRVGKEVKLTVACAMISRLVKDKSHYISVKEDVKRAIEDLAAKIMPDYNVEVTVNAADKPEYDIFYLTVTGTSAEHGDDGMTGRGNKANGLITPMRSMSLEAAAGKNPVSHVGKIYNVVAQRIADRIYKEVKDVVEVYVEVVSQIGKPINEPKILNVEILSSGELTGELRREAEAIAKEEMDRITQVTELILRGEVSLY" ;
ns2:SIO_000116 "S-adenosylmethionine synthase" ;
ns2:SIO_001390 () ;
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/6450b8c4-093b-4373-bc41-5110c58a33ee> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/7324800e-f8ca-4690-abc9-72a2d45f990b> a <https://github.com/PyEED/pyeed/Organism> ;
ns2:data_1179 410359 ;
ns2:data_1870 "Pyrobaculum" ;
ns2:data_2732 "Thermoproteaceae" ;
ns2:data_2909 "Pyrobaculum calidifontis JCM 11548" .
<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/6450b8c4-093b-4373-bc41-5110c58a33ee> a <https://github.com/PyEED/pyeed/Organism> ;
ns1:data_1179 410359 ;
ns1:data_1870 "Pyrobaculum" ;
ns1:data_2732 "Thermoproteaceae" ;
ns1:data_2909 "Pyrobaculum calidifontis JCM 11548" .

4 changes: 2 additions & 2 deletions graph-network/ttl/A4G0T1.ttl
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ns2:SIO_000030 "MANIVVKRLERTPIDETPVEIVERKGIGHPDSICDGIAESVSVALCKMYKEKMGVVLHHNTDQVELVGGYAYPELGGGCMVSPIYVLLSGRATMEVLDKKSGKIIKLPVNTTAVNAARDYLKKAIRNMDLEKDVVVDCRIGQGSVDLVEVFDRKRSEIPHANDTSFGVGHAPLSTTEKIVLETEKLLNSDALKAEIPAVGEDIKVMGLREGKKITLTIAMAAVDKYVNSCADYVKVKELAKAKVEENAKKYLDSHELEVCINTADDDEDCIFLTVTGTSAEMGDDGSVGRGNRANGLITPFRPMSMEATSGKNPINHIGKIYNILSNIIAEDVAKIEGVRECQIRILSQIGKPITEPKILDIEMIPENGFELEELSPKAKEVAQKWLENISEVTERIVSGNVTTF" ;
ns2:SIO_000116 "S-adenosylmethionine synthase" ;
ns2:SIO_001390 ( <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_009135.1> ) ;
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/6a162c41-d94a-4479-b90c-a08d39e833da> .
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/2bd55dd7-7f6f-4d51-b9f6-6dacfd2d81b2> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/6a162c41-d94a-4479-b90c-a08d39e833da> a <https://github.com/PyEED/pyeed/Organism> ;
<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/2bd55dd7-7f6f-4d51-b9f6-6dacfd2d81b2> a <https://github.com/PyEED/pyeed/Organism> ;
ns1:data_1179 402880 ;
ns1:data_1870 "Methanococcus" ;
ns1:data_2732 "Methanococcaceae" ;
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4 changes: 2 additions & 2 deletions graph-network/ttl/A5UMW7.ttl
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ns1:SIO_000030 "MRNIIVKELNQTYIEDIDIEIVERKGIGHPDSISDGIGETVSEALCKMYMDELGGVLHHNTDEVQITAGESNPVFGGGKILKPIDILLTGRGVSEYDGIKFPLDRVAIEAAKNFLDDTIINLDVELDTVVECKIGHGSGDLVDVFKREGAPSSNDTSFGVGYAPFSETETLVKATEELLNSKPFKAKHPAVGEDIKVMGLREGEKITLTIGCAMVSKFVANREEYIAVREELKDIVSDLATKYTNREVEVFVNTADNDDATDESGYYLTVTGTSAEMGDDGSVGRGNRANGLITPCRPMSMEASSGKNPINHVGKIYNILSNEIAKDVVENVEGIKQMNVMILSQIGKPIDQPKAASTQVILEDGVKLEDVDKKVEQIVDRWLEDISIITENVVQGKTRTF" ;
ns1:SIO_000116 "S-adenosylmethionine synthase" ;
ns1:SIO_001390 ( <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NZ_CP117965.1> ) ;
ns1:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/1ab8ae6f-f9f4-4f6d-b179-30888e386310> .
ns1:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/77883cec-9f1b-43f2-8002-305bbd84b1ab> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/1ab8ae6f-f9f4-4f6d-b179-30888e386310> a <https://github.com/PyEED/pyeed/Organism> ;
<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/77883cec-9f1b-43f2-8002-305bbd84b1ab> a <https://github.com/PyEED/pyeed/Organism> ;
ns2:data_1179 420247 ;
ns2:data_1870 "Methanobrevibacter" ;
ns2:data_2732 "Methanobacteriaceae" ;
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28 changes: 14 additions & 14 deletions graph-network/ttl/A6UQS6.ttl
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@prefix ns1: <http://semanticscience.org/resource/> .
@prefix ns2: <http://edamontology.org/> .
@prefix ns1: <http://edamontology.org/> .
@prefix ns2: <http://semanticscience.org/resource/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/A6UQS6> a <https://github.com/PyEED/pyeed/ProteinRecord> ;
ns2:data_1011 "2.5.1.6" ;
ns2:data_1505 4.4207e+04 ;
ns1:SIO_000030 "MANIVVKKLERTPIDETPVEIVERKGIGHPDSICDGIAESVSVALCKMYKEKLGVVLHHNTDQVELVGGYAYPKLGGGCMINPIYVLLSGRATAEVLDKETGKIVKLPVNTTAVNAAREYLKKALRNIDLEKDVVVDCRIGQGSVDLVEVFDRKRSEIPHANDTSFGVGHAPLSTTEKIVLETEKLLNSAELKAIVPGVGEDIKVMGLREGKKITLTIAMAVVDKYADSLEEYEKVKEMAHKKVVENAQKYLNGHELEVFINTADDEECIFLTVTGTSAEMGDDGSVGRGNRANGLITPFRPMSMEATSGKNPINHIGKIYNILSNIIASDVAELEEVKECQIRILSQIGKPITEPKILSIEVIPENGFTLDDVTKKATEVAEKWLDNIQNVTEKIVEGKVTTF" ;
ns1:SIO_000116 "S-adenosylmethionine synthase" ;
ns1:SIO_001390 ( <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_009634.1> ) ;
ns1:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/e8ed2c52-c5f4-4dab-8fb8-2d882735909b> .
ns1:data_1011 "2.5.1.6" ;
ns1:data_1505 4.4207e+04 ;
ns2:SIO_000030 "MANIVVKKLERTPIDETPVEIVERKGIGHPDSICDGIAESVSVALCKMYKEKLGVVLHHNTDQVELVGGYAYPKLGGGCMINPIYVLLSGRATAEVLDKETGKIVKLPVNTTAVNAAREYLKKALRNIDLEKDVVVDCRIGQGSVDLVEVFDRKRSEIPHANDTSFGVGHAPLSTTEKIVLETEKLLNSAELKAIVPGVGEDIKVMGLREGKKITLTIAMAVVDKYADSLEEYEKVKEMAHKKVVENAQKYLNGHELEVFINTADDEECIFLTVTGTSAEMGDDGSVGRGNRANGLITPFRPMSMEATSGKNPINHIGKIYNILSNIIASDVAELEEVKECQIRILSQIGKPITEPKILSIEVIPENGFTLDDVTKKATEVAEKWLDNIQNVTEKIVEGKVTTF" ;
ns2:SIO_000116 "S-adenosylmethionine synthase" ;
ns2:SIO_001390 ( <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_009634.1> ) ;
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/4dface1f-5ffe-469a-93fb-5d061a0fe276> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_009634.1> a <https://github.com/PyEED/pyeed/Region> .
<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/4dface1f-5ffe-469a-93fb-5d061a0fe276> a <https://github.com/PyEED/pyeed/Organism> ;
ns1:data_1179 406327 ;
ns1:data_1870 "Methanococcus" ;
ns1:data_2732 "Methanococcaceae" ;
ns1:data_2909 "Methanococcus vannielii SB" .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/e8ed2c52-c5f4-4dab-8fb8-2d882735909b> a <https://github.com/PyEED/pyeed/Organism> ;
ns2:data_1179 406327 ;
ns2:data_1870 "Methanococcus" ;
ns2:data_2732 "Methanococcaceae" ;
ns2:data_2909 "Methanococcus vannielii SB" .
<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_009634.1> a <https://github.com/PyEED/pyeed/Region> .

26 changes: 13 additions & 13 deletions graph-network/ttl/A6UU75.ttl
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@prefix ns1: <http://edamontology.org/> .
@prefix ns2: <http://semanticscience.org/resource/> .
@prefix ns1: <http://semanticscience.org/resource/> .
@prefix ns2: <http://edamontology.org/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/A6UU75> a <https://github.com/PyEED/pyeed/ProteinRecord> ;
ns1:data_1011 "2.5.1.6" ;
ns1:data_1505 4.4027e+04 ;
ns2:SIO_000030 "MANIVVKKLNSTPIEELPVEIVERKGIGHPDSICDGIAEAVSVALCKMYKEKMGAVLHHNTDQVELVGGYAYPSLGGGDIVNPIYVLLSGRATTEVFDKEKCETIRLPVGTVAVNAAREYIKNTIINLDVEKDIVVDCRIGQGSVDLVGVFDRENSIPLANDTSFGVGHAPFSTTENLVLKTEQLLNSKEIKKEIPAIGEDIKVMGLREGKKITLTIAMATVDKYVNSVEEYEEIKAKAKAKVEELAKEYADGYEIEVFVNTADSDNCIFLTVSGTSAEMGDDGSVGRGNRANGLITPFRPMSMEATSGKNPINHIGKLYNILANIIANDVAKIEGVNECHVRILSQIGKPVNEPKILDIELITDEGYDVADIEPKANEIAEYWLNNIEEVREKLMTGEIKTF" ;
ns2:SIO_000116 "S-adenosylmethionine synthase" ;
ns2:SIO_001390 ( <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_009635.1> ) ;
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/5c5f6ebd-2f60-426d-bb61-7d263b51e194> .
ns2:data_1011 "2.5.1.6" ;
ns2:data_1505 4.4027e+04 ;
ns1:SIO_000030 "MANIVVKKLNSTPIEELPVEIVERKGIGHPDSICDGIAEAVSVALCKMYKEKMGAVLHHNTDQVELVGGYAYPSLGGGDIVNPIYVLLSGRATTEVFDKEKCETIRLPVGTVAVNAAREYIKNTIINLDVEKDIVVDCRIGQGSVDLVGVFDRENSIPLANDTSFGVGHAPFSTTENLVLKTEQLLNSKEIKKEIPAIGEDIKVMGLREGKKITLTIAMATVDKYVNSVEEYEEIKAKAKAKVEELAKEYADGYEIEVFVNTADSDNCIFLTVSGTSAEMGDDGSVGRGNRANGLITPFRPMSMEATSGKNPINHIGKLYNILANIIANDVAKIEGVNECHVRILSQIGKPVNEPKILDIELITDEGYDVADIEPKANEIAEYWLNNIEEVREKLMTGEIKTF" ;
ns1:SIO_000116 "S-adenosylmethionine synthase" ;
ns1:SIO_001390 ( <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_009635.1> ) ;
ns1:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/07476f51-ca74-4529-a1eb-e45684563341> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/5c5f6ebd-2f60-426d-bb61-7d263b51e194> a <https://github.com/PyEED/pyeed/Organism> ;
ns1:data_1179 419665 ;
ns1:data_1870 "Methanococcus" ;
ns1:data_2732 "Methanococcaceae" ;
ns1:data_2909 "Methanococcus aeolicus Nankai-3" .
<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/07476f51-ca74-4529-a1eb-e45684563341> a <https://github.com/PyEED/pyeed/Organism> ;
ns2:data_1179 419665 ;
ns2:data_1870 "Methanococcus" ;
ns2:data_2732 "Methanococcaceae" ;
ns2:data_2909 "Methanococcus aeolicus Nankai-3" .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_009635.1> a <https://github.com/PyEED/pyeed/Region> .

4 changes: 2 additions & 2 deletions graph-network/ttl/A6VHQ4.ttl
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ns1:SIO_000030 "MANIVVKRLERTPIDETPVEIVERKGIGHPDSICDGVAESVSVALCKMYKEKMGVVLHHNTDQVELVGGYAYPELGGGCMVSPIYILLSGRATMEVLDKESGKIIKLPVNTTAVNAARDYLKKALRNMDLEKDVVVDCRIGQGSVDLVEVFDRKRSEIPHANDTSFGVGHAPLSTTEKIVLETEKLLNSDALKAEIPAVGEDIKVMGLREGKKITLTIAMAAVDKYVNSCADYVKVKELAKAKVEENAKKYLDGHELEVCINTADDDEDCIFLTVTGTSAEMGDDGSVGRGNRANGLITPFRPMSMEATSGKNPINHIGKIYNILSNIIAEDVAKIEGVRECQIRILSQIGKPITEPKILDIEMIPENGFELEDLSPKAKEIAQKWLDNITEVTERIVSGNVTTF" ;
ns1:SIO_000116 "S-adenosylmethionine synthase" ;
ns1:SIO_001390 () ;
ns1:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/4b6a38cb-85e8-40f6-80d4-775305207fde> .
ns1:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/0829a3d3-de87-4d1f-9cf6-bf6fbc33b89d> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/4b6a38cb-85e8-40f6-80d4-775305207fde> a <https://github.com/PyEED/pyeed/Organism> ;
<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/0829a3d3-de87-4d1f-9cf6-bf6fbc33b89d> a <https://github.com/PyEED/pyeed/Organism> ;
ns2:data_1179 426368 ;
ns2:data_1870 "Methanococcus" ;
ns2:data_2732 "Methanococcaceae" ;
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4 changes: 2 additions & 2 deletions graph-network/ttl/A7I771.ttl
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ns2:SIO_000030 "MKRNIQIEALNQIPLEKQRIELVERKCLGHPDSIADGIAESISQALCREYLKEFGAVLHHNTDQGEVVAGESCPKFGGGKMIRPIYVLIDGRATKQFNGVTIPTDTVAVEAAHEYLHKILPELNLQRDVMIDSRLGTGSTDLRDVFKPRQGKVPRSNDTSFGVGHAPFSDVETIIRNTSEYIDTKLRKKYPAIGQDIKIMGLRDGNTITLTVACAIVDRYCADIREYQEYMGLLTEEIGKVAKKSTKRKVVVNLNTADDIKSKSVFLTVTGTSAEMGDDGSVGRGNRCNGLITPNRPMSMEATSGKNPINHIGKIYNLLSTQIAQESIKKVDGIEEMYVRLLSQIGKPIDQPLVASVQVLPRKGVTLQEINGEIQAIVDDNLANVTSITEKVIRGELKTF" ;
ns2:SIO_000116 "S-adenosylmethionine synthase" ;
ns2:SIO_001390 ( <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/NC_009712.1> ) ;
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/70f33e6e-0050-4d85-a274-77c24b7e7a82> .
ns2:SIO_010000 <file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/87e4b9f7-0b01-4bb6-b05b-f58613229aa6> .

<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/70f33e6e-0050-4d85-a274-77c24b7e7a82> a <https://github.com/PyEED/pyeed/Organism> ;
<file:///Users/max/Documents/GitHub/pyeed/graph-network/graph-network/87e4b9f7-0b01-4bb6-b05b-f58613229aa6> a <https://github.com/PyEED/pyeed/Organism> ;
ns1:data_1179 456442 ;
ns1:data_1870 "Methanoregula" ;
ns1:data_2732 "Methanoregulaceae" ;
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