External db refactor #48
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haeussma
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Jun 21, 2024
* renamed * INFO * renamed from_ncbi to `get_id` * renamed * removed unused arg in get_ncbi_entry * removed get_ncbi_entry() * cleaning * cleaning * working tax fetcher * removed old * added mocker as dev dependency * added tests for NCBITaxonomyFetcher * finished * introduced fetch method * introduced fetcher * cleaned * working * refactored NCBIProteinFetcher * deleted old test notebooks * added fetchers to structure * typos and new syntax * added MMSEQS2 to ToolImages * added mmseqs2 * fixed wring logging level * added deprecation * to_faster writes file * updateed notebooks
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