ci.yaml

name: Testing and release

on:
  push:
    branches:
      - main
      - development
    tags:
      # The regex: /^v?((\d+)(\.\d+)*)(-?(a|b|c|rc|alpha|beta)([0-9]+)?)?$
      - 'v[0-9].[0-9]+.[0-9]+*'
  pull_request:
    branches:
      - main
      - development

  # Allows you to run this workflow manually from the Actions tab
  workflow_dispatch:

jobs:
  build_linux:
    name: Build-Test Linux
    strategy:
      fail-fast: false
      matrix:
        os: [ubuntu-20.04, ubuntu-22.04]
    runs-on: ${{ matrix.os }}
    defaults:
      run:
        shell: bash
    steps:
      - uses: actions/checkout@v3
        with:
          fetch-depth: 0
          submodules: recursive


      - uses: actions/setup-python@v5
        id: pyexe
        with:
          python-version: '3.10'

      # - name: Setup python libs
      #   id: pyexe
      #   run: |
      #     python3 --version
      #     python3 -m pip install pytest
      #     py_exe_path=$(which python3)
      #     echo ::set-output name=path::$py_exe_path

      - name: Resolve dependencies
        run: |
          sudo apt-get update
          sudo apt-get install libnetcdf-c++4-dev libnetcdf-dev xorg-dev libeigen3-dev pybind11-dev

      - name: Build and test
        run: |
          mkdir -p build && cd build;
          cmake -DCMAKE_BUILD_TYPE=RELEASE -DBUILD_PYMEM3DG=ON -DSUITESPARSE=OFF -DWITH_NETCDF=ON -DPython_EXECUTABLE:FILEPATH=${{ steps.pyexe.outputs.python-path }} --log-level=DEBUG ..
          cmake --build . --config Release -j 4
          ctest -C Release -V -j 4

  build_macos:
    name: Build-Test macOS
    strategy:
      fail-fast: false
      matrix:
        os: [macos-latest]
    runs-on: ${{ matrix.os }}
    defaults:
      run:
        shell: bash
    steps:
      - uses: actions/checkout@v3
        with:
          fetch-depth: 0
          submodules: recursive

      - uses: actions/setup-python@v5
        id: pyexe
        with:
          python-version: '3.10'

      # - name: Setup python libs
      #   id: pyexe
      #   run: |
      #     python3 --version
      #     # python3 -m pip install pytest
      #     py_exe_path=$(which python3)
      #     echo ::set-output name=path::$py_exe_path

      - name: Resolve dependencies
        run: brew install netcdf eigen pybind11 netcdf-cxx

      - name: Build
        run: |
          mkdir -p build && cd build;
          cmake -DCMAKE_BUILD_TYPE=RELEASE -DBUILD_PYMEM3DG=ON -DSUITESPARSE=OFF -DWITH_NETCDF=ON -DPython_EXECUTABLE:FILEPATH=${{ steps.pyexe.outputs.python-path }} --log-level=DEBUG ..
          cmake --build . --config Release -j 4

      - name: Test
        run: ctest -C Release -V -j 4


  # build_windows:
  #   name: Build-Test Windows
  #   strategy:
  #     fail-fast: false
  #     matrix:
  #       os: [windows-latest]
  #   runs-on: ${{ matrix.os }}
  #   defaults:
  #     run:
  #       shell: bash
  #   steps:
  #     - uses: actions/checkout@v3
  #       with:
  #         fetch-depth: 0
  #         submodules: recursive

  #     - name: Setup python libs
  #       id: pyexe
  #       run: |
  #         python --version
  #         python -m pip install pytest
  #         py_exe_path=$(which python)
  #         echo ::set-output name=path::$py_exe_path

  #     - name: Restore from cache and install vcpkg
  #       # Download and build vcpkg, without installing any port. If content is cached already, it is a no-op.
  #       uses: lukka/run-vcpkg@v11
  #       with:
  #         vcpkgGitCommitId: 5c9f906558f9bb12ee9811d6edc98ec9255c6cda5
  #         setupOnly: true

  #     - name: Download libraries
  #       run: $VCPKG_ROOT/vcpkg install netcdf-c:x64-windows netcdf-cxx4:x64-windows eigen3:x64-windows

  #     - name: Build and test
  #       run: |
  #         mkdir -p build && cd build;
  #         cmake -DCMAKE_BUILD_TYPE=RELEASE -DBUILD_PYMEM3DG=ON -DSUITESPARSE=OFF -DWITH_NETCDF=ON -DPython_EXECUTABLE:FILEPATH=${{ steps.pyexe.outputs.path }} -DCMAKE_TOOLCHAIN_FILE="$VCPKG_ROOT/scripts/buildsystems/vcpkg.cmake" ..
  #         cmake --build . --config Release -j 4
  #         ctest -C Release -V -j 4


  deploy_documentation:
    name: Deploy documentation to Github pages
    runs-on: ubuntu-latest
    # needs: [build_windows, build_linux, build_macos]
    # if: github.ref == 'refs/heads/master'
    if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/v')
    steps:
    - uses: actions/checkout@v3
      with:
        fetch-depth: 0
        submodules: recursive

    - name: Get Project Version
      id: version
      run: |
        mem3dg_version=$(git describe --tags --always --dirty)
        echo $mem3dg_version
        echo ::set-output name=version::$mem3dg_version

    - name: Configure python version
      uses: actions/setup-python@v5
      with:
        python-version: '3.10'

    - name: Setup python libs
      id: pyexe
      run: |
        python3 --version
        py_exe_path=$(which python3)
        echo ::set-output name=path::$py_exe_path

    - name: Resolve dependencies
      run: |
        sudo apt-get update
        sudo apt-get install libnetcdf-c++4-dev libnetcdf-dev xorg-dev libeigen3-dev pybind11-dev ninja-build doxygen

    - name: Build pymem3dg and install
      run: |
         python3 -m pip install -v ".[docs]"

    - name: Build docs
      run: |
        mkdir -p build && cd build;
        cmake -DCMAKE_BUILD_TYPE=RELEASE -DBUILD_MEM3DG_DOCS=ON -DBUILD_PYMEM3DG=ON -DSUITESPARSE=OFF -DWITH_NETCDF=ON -DPython_EXECUTABLE:FILEPATH=${{ steps.pyexe.outputs.path }} ..
        cmake --build . --target mem3dg_doxy_docs --config Release -j 4
        cmake --build . --target mem3dg_sphinx_docs --config Release -j 4

    - name: Deploy cpp docs
      uses: peaceiris/actions-gh-pages@v3
      with:
        github_token: ${{ secrets.GITHUB_TOKEN }}
        destination_dir: ${{ steps.version.outputs.version }}/cpp
        publish_dir: ./build/docs/cpp/html
        enable_jekyll: true

    - name: Deploy python docs
      uses: peaceiris/actions-gh-pages@v3
      with:
        github_token: ${{ secrets.GITHUB_TOKEN }}
        destination_dir: ${{ steps.version.outputs.version }}/py
        publish_dir: ./build/docs/py/html
        enable_jekyll: true


  deploy_to_pypi:
    name: Deploy to PyPI
    if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/v')
    runs-on: ubuntu-latest
    needs: [build_linux, build_macos]
    defaults:
      run:
        shell: bash

    steps:
    - uses: actions/checkout@v3
      with:
        fetch-depth: 0
        submodules: recursive

    - name: Update python libs
      run: python -m pip install build

    - name: Configures source dist
      run: python -m build --sdist

    - name: Display structure of files
      run: ls -R

    - name: Publish package
      uses: pypa/gh-action-pypi-publish@release/v1
      with:
        user: __token__
        password: ${{ secrets.PYPI_API_TOKEN }}