Updated to include edges that link biolink:Disease nodes to GO Terms … #572
Workflow file for this run
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| ############### | |
| # test workflow for Data_services | |
| # powen, 8/11/2021 | |
| ############### | |
| name: 'test' | |
| on: [push] | |
| jobs: | |
| test: | |
| name: test | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [3.9] | |
| steps: | |
| - name: Checkout the repository | |
| uses: actions/checkout@v2 | |
| - name: create env params | |
| run: | | |
| echo "PYTHONPATH=$PWD:$PWD/robokop-genetics" >> $GITHUB_ENV | |
| echo "ROBOKOP_HOME=$PWD" >> $GITHUB_ENV | |
| mkdir -p $PWD/tests/logs | |
| mkdir -p $PWD/tests/storage | |
| echo "DATA_SERVICES_LOGS=$PWD/tests/logs" >> $GITHUB_ENV | |
| echo "DATA_SERVICES_STORAGE=$PWD/tests/storage" >> $GITHUB_ENV | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| - name: Run pytest | |
| run: | | |
| python -m pytest tests/ |