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The observable field exists for storing observables, but I don't think there are ways to populate it (except for when loading models that already have them).
I think ModelingToolkit partially supports creating and adding observables to a system, so if we can use this when creating models programmatically, we should document how.
For the DSL it is currently not possible, but adding an option like
It is just a kwarg to ReactionSystem, so a user is free to put equations in it. I think SBMLToolkit uses it, for example.
I don't remember, however, if issues could arise should say Xtot in your example be used within an equation. ModelingToolkit uses that field to store variables that have been removed by structural_simplify, and hence won't be in the final equations.
The
observable
field exists for storing observables, but I don't think there are ways to populate it (except for when loading models that already have them).I think ModelingToolkit partially supports creating and adding observables to a system, so if we can use this when creating models programmatically, we should document how.
For the DSL it is currently not possible, but adding an option like
seems like it would be a good idea.
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