diff --git a/stable b/stable index 76b426fd..18f3fb19 120000 --- a/stable +++ b/stable @@ -1 +1 @@ -v2.1.1 \ No newline at end of file +v2.1.2 \ No newline at end of file diff --git a/v2 b/v2 index 76b426fd..18f3fb19 120000 --- a/v2 +++ b/v2 @@ -1 +1 @@ -v2.1.1 \ No newline at end of file +v2.1.2 \ No newline at end of file diff --git a/v2.1 b/v2.1 index 76b426fd..18f3fb19 120000 --- a/v2.1 +++ b/v2.1 @@ -1 +1 @@ -v2.1.1 \ No newline at end of file +v2.1.2 \ No newline at end of file diff --git a/v2.1.2/.documenter-siteinfo.json b/v2.1.2/.documenter-siteinfo.json new file mode 100644 index 00000000..60ae8579 --- /dev/null +++ b/v2.1.2/.documenter-siteinfo.json @@ -0,0 +1 @@ +{"documenter":{"julia_version":"1.10.4","generation_timestamp":"2024-06-24T05:16:04","documenter_version":"1.4.1"}} \ No newline at end of file diff --git a/v2.1.2/api/index.html b/v2.1.2/api/index.html new file mode 100644 index 00000000..bdf5fe33 --- /dev/null +++ b/v2.1.2/api/index.html @@ -0,0 +1,44 @@ + +API References · Deep Equilibrium Networks

Deep Equilibrium Models

(Bai et al., 2019) introduced Discrete Deep Equilibrium Models which drives a Discrete Dynamical System to its steady-state. (Pal et al., 2022) extends this framework to Continuous Dynamical Systems which converge to the steady-stable in a more stable fashion. For a detailed discussion refer to (Pal et al., 2022).

To construct a continuous DEQ, any ODE solver compatible with DifferentialEquations.jl API can be passed as the solver. To construct a discrete DEQ, any root finding algorithm compatible with NonlinearSolve.jl API can be passed as the solver.

Choosing a Solver

Root Finding Algorithms

Using Root Finding Algorithms give fast convergence when possible, but these methods also tend to be unstable. If you must use a root finding algorithm, we recommend using:

  1. NewtonRaphson or TrustRegion for small models
  2. LimitedMemoryBroyden for large Deep Learning applications (with well-conditioned Jacobians)
  3. NewtonRaphson(; linsolve = KrylovJL_GMRES()) for cases when Broyden methods fail

Note that Krylov Methods rely on efficient VJPs which are not available for all Lux models. If you think this is causing a performance regression, please open an issue in Lux.jl.

ODE Solvers

Using ODE Solvers give slower convergence, but are more stable. We generally recommend these methods over root finding algorithms. If you use implicit ODE solvers, remember to use Krylov linear solvers, see OrdinaryDiffEq.jl documentation for these. For most cases, we recommend:

  1. VCAB3() for high tolerance problems
  2. Tsit5() for high tolerance problems where VCAB3() fails
  3. In all other cases, follow the recommendation given in OrdinaryDiffEq.jl documentation

Sensitivity Analysis

  1. For MultiScaleNeuralODE, we default to GaussAdjoint(; autojacvec = ZygoteVJP()). A faster alternative would be BacksolveAdjoint(; autojacvec = ZygoteVJP()) but there are stability concerns for using that. Follow the recommendation given in SciMLSensitivity.jl documentation.
  2. For Steady State Problems, we default to SteadyStateAdjoint(; linsolve = SimpleGMRES(; blocksize, linsolve_kwargs = (; maxiters=10, abstol=1e-3, reltol=1e-3))). This default will perform poorly on small models. It is recommended to pass sensealg = SteadyStateAdjoint() or sensealg = SteadyStateAdjoint(; linsolve = LUFactorization()) for small models.

Standard Models

DeepEquilibriumNetworks.DeepEquilibriumNetworkType
DeepEquilibriumNetwork(model, solver; init = missing, jacobian_regularization=nothing,
+    problem_type::Type{pType}=SteadyStateProblem{false}, kwargs...)

Deep Equilibrium Network as proposed in (Bai et al., 2019) and (Pal et al., 2022).

Arguments

  • model: Neural Network.
  • solver: Solver for the rootfinding problem. ODE Solvers and Nonlinear Solvers are both supported.

Keyword Arguments

  • init: Initial Condition for the rootfinding problem. If nothing, the initial condition is set to zero(x). If missing, the initial condition is set to WrappedFunction{:direct_call}(zero). In other cases the initial condition is set to init(x, ps, st).
  • jacobian_regularization: Must be one of nothing, AutoForwardDiff, AutoFiniteDiff or AutoZygote.
  • problem_type: Provides a way to simulate a Vanilla Neural ODE by setting the problem_type to ODEProblem. By default, the problem type is set to SteadyStateProblem.
  • kwargs: Additional Parameters that are directly passed to SciMLBase.solve.

Example

julia> model = DeepEquilibriumNetwork(
+           Parallel(+, Dense(2, 2; use_bias=false), Dense(2, 2; use_bias=false)),
+           VCABM3(); verbose=false)
+DeepEquilibriumNetwork(
+    model = Parallel(
+        +
+        layer_1 = Dense(2 => 2, bias=false),  # 4 parameters
+        layer_2 = Dense(2 => 2, bias=false),  # 4 parameters
+    ),
+    init = WrappedFunction(Base.Fix1{typeof(DeepEquilibriumNetworks.__zeros_init), Nothing}(DeepEquilibriumNetworks.__zeros_init, nothing)),
+)         # Total: 8 parameters,
+          #        plus 0 states.
+
+julia> rng = Xoshiro(0);
+
+julia> ps, st = Lux.setup(rng, model);
+
+julia> size(first(model(ones(Float32, 2, 1), ps, st)))
+(2, 1)

See also: SkipDeepEquilibriumNetwork, MultiScaleDeepEquilibriumNetwork, MultiScaleSkipDeepEquilibriumNetwork.

source

MultiScale Models

DeepEquilibriumNetworks.MultiScaleDeepEquilibriumNetworkFunction
MultiScaleDeepEquilibriumNetwork(main_layers::Tuple, mapping_layers::Matrix,
+    post_fuse_layer::Union{Nothing, Tuple}, solver,
+    scales::NTuple{N, NTuple{L, Int64}}; kwargs...)

Multi Scale Deep Equilibrium Network as proposed in (Bai et al., 2020).

Arguments

  • main_layers: Tuple of Neural Networks. Each Neural Network is applied to the corresponding scale.
  • mapping_layers: Matrix of Neural Networks. Each Neural Network is applied to the corresponding scale and the corresponding layer.
  • post_fuse_layer: Neural Network applied to the fused output of the main layers.
  • solver: Solver for the rootfinding problem. ODE Solvers and Nonlinear Solvers are both supported.
  • scales: Scales of the Multi Scale DEQ. Each scale is a tuple of integers. The length of the tuple is the number of layers in the corresponding main layer.

For keyword arguments, see DeepEquilibriumNetwork.

Example

julia> main_layers = (
+           Parallel(+, Dense(4 => 4, tanh; use_bias=false), Dense(4 => 4, tanh; use_bias=false)),
+           Dense(3 => 3, tanh), Dense(2 => 2, tanh), Dense(1 => 1, tanh));
+
+julia> mapping_layers = [NoOpLayer() Dense(4 => 3, tanh) Dense(4 => 2, tanh) Dense(4 => 1, tanh);
+                         Dense(3 => 4, tanh) NoOpLayer() Dense(3 => 2, tanh) Dense(3 => 1, tanh);
+                         Dense(2 => 4, tanh) Dense(2 => 3, tanh) NoOpLayer() Dense(2 => 1, tanh);
+                         Dense(1 => 4, tanh) Dense(1 => 3, tanh) Dense(1 => 2, tanh) NoOpLayer()];
+
+julia> model = MultiScaleDeepEquilibriumNetwork(
+           main_layers, mapping_layers, nothing, NewtonRaphson(), ((4,), (3,), (2,), (1,)));
+
+julia> rng = Xoshiro(0);
+
+julia> ps, st = Lux.setup(rng, model);
+
+julia> x = rand(rng, Float32, 4, 12);
+
+julia> size.(first(model(x, ps, st)))
+((4, 12), (3, 12), (2, 12), (1, 12))
source
DeepEquilibriumNetworks.MultiScaleSkipDeepEquilibriumNetworkFunction
MultiScaleSkipDeepEquilibriumNetwork(main_layers::Tuple, mapping_layers::Matrix,
+    post_fuse_layer::Union{Nothing, Tuple}, [init = nothing,] solver,
+    scales::NTuple{N, NTuple{L, Int64}}; kwargs...)

Skip Multi Scale Deep Equilibrium Network as proposed in (Pal et al., 2022). Alias which creates a MultiScaleDeepEquilibriumNetwork with init kwarg set to passed value.

If init is not passed, it creates a MultiScale Regularized Deep Equilibrium Network.

source

Solution

DeepEquilibriumNetworks.DeepEquilibriumSolutionType
DeepEquilibriumSolution(z_star, u₀, residual, jacobian_loss, nfe, solution)

Stores the solution of a DeepEquilibriumNetwork and its variants.

Fields

  • z_star: Steady-State or the value reached due to maxiters
  • u0: Initial Condition
  • residual: Difference of the $z^*$ and $f(z^*, x)$
  • jacobian_loss: Jacobian Stabilization Loss (see individual networks to see how it can be computed)
  • nfe: Number of Function Evaluations
  • original: Original Internal Solution
source
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'https://cdnjs.cloudflare.com/ajax/libs/headroom/0.12.0/headroom.min', + 'jqueryui': 'https://cdnjs.cloudflare.com/ajax/libs/jqueryui/1.13.2/jquery-ui.min', + 'katex-auto-render': 'https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.16.8/contrib/auto-render.min', + 'jquery': 'https://cdnjs.cloudflare.com/ajax/libs/jquery/3.7.0/jquery.min', + 'headroom-jquery': 'https://cdnjs.cloudflare.com/ajax/libs/headroom/0.12.0/jQuery.headroom.min', + 'katex': 'https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.16.8/katex.min', + 'highlight': 'https://cdnjs.cloudflare.com/ajax/libs/highlight.js/11.8.0/highlight.min', + 'highlight-julia-repl': 'https://cdnjs.cloudflare.com/ajax/libs/highlight.js/11.8.0/languages/julia-repl.min', + }, + shim: { + "highlight-julia": { + "deps": [ + "highlight" + ] + }, + "katex-auto-render": { + "deps": [ + "katex" + ] + }, + "headroom-jquery": { + "deps": [ + "jquery", + "headroom" + ] + }, + "highlight-julia-repl": { + "deps": [ + "highlight" + ] + } +} +}); +//////////////////////////////////////////////////////////////////////////////// +require(['jquery', 'katex', 'katex-auto-render'], function($, katex, renderMathInElement) { +$(document).ready(function() { + renderMathInElement( + document.body, + { + "delimiters": [ + { + "left": "$", + "right": "$", + "display": false + }, + { + "left": "$$", + "right": "$$", + "display": true + }, + { + "left": "\\[", + "right": "\\]", + "display": true + } + ] +} + + ); +}) + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery', 'highlight', 'highlight-julia', 'highlight-julia-repl'], function($) { +$(document).ready(function() { + hljs.highlightAll(); +}) + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +let timer = 0; +var isExpanded = true; + +$(document).on("click", ".docstring header", function () { + let articleToggleTitle = "Expand docstring"; + + debounce(() => { + if ($(this).siblings("section").is(":visible")) { + $(this) + .find(".docstring-article-toggle-button") + .removeClass("fa-chevron-down") + .addClass("fa-chevron-right"); + } else { + $(this) + .find(".docstring-article-toggle-button") + .removeClass("fa-chevron-right") + .addClass("fa-chevron-down"); + + articleToggleTitle = "Collapse docstring"; + } + + $(this) + .find(".docstring-article-toggle-button") + .prop("title", articleToggleTitle); + $(this).siblings("section").slideToggle(); + }); +}); + +$(document).on("click", ".docs-article-toggle-button", function (event) { + let articleToggleTitle = "Expand docstring"; + let navArticleToggleTitle = "Expand all docstrings"; + let animationSpeed = event.noToggleAnimation ? 0 : 400; + + debounce(() => { + if (isExpanded) { + $(this).removeClass("fa-chevron-up").addClass("fa-chevron-down"); + $(".docstring-article-toggle-button") + .removeClass("fa-chevron-down") + .addClass("fa-chevron-right"); + + isExpanded = false; + + $(".docstring section").slideUp(animationSpeed); + } else { + $(this).removeClass("fa-chevron-down").addClass("fa-chevron-up"); + $(".docstring-article-toggle-button") + .removeClass("fa-chevron-right") + .addClass("fa-chevron-down"); + + isExpanded = true; + articleToggleTitle = "Collapse docstring"; + navArticleToggleTitle = "Collapse all docstrings"; + + $(".docstring section").slideDown(animationSpeed); + } + + $(this).prop("title", navArticleToggleTitle); + $(".docstring-article-toggle-button").prop("title", articleToggleTitle); + }); +}); + +function debounce(callback, timeout = 300) { + if (Date.now() - timer > timeout) { + callback(); + } + + clearTimeout(timer); + + timer = Date.now(); +} + +}) +//////////////////////////////////////////////////////////////////////////////// +require([], function() { +function addCopyButtonCallbacks() { + for (const el of document.getElementsByTagName("pre")) { + const button = document.createElement("button"); + button.classList.add("copy-button", "fa-solid", "fa-copy"); + button.setAttribute("aria-label", "Copy this code block"); + button.setAttribute("title", "Copy"); + + el.appendChild(button); + + const success = function () { + button.classList.add("success", "fa-check"); + button.classList.remove("fa-copy"); + }; + + const failure = function () { + button.classList.add("error", "fa-xmark"); + button.classList.remove("fa-copy"); + }; + + button.addEventListener("click", function () { + copyToClipboard(el.innerText).then(success, failure); + + setTimeout(function () { + button.classList.add("fa-copy"); + button.classList.remove("success", "fa-check", "fa-xmark"); + }, 5000); + }); + } +} + +function copyToClipboard(text) { + // clipboard API is only available in secure contexts + if (window.navigator && window.navigator.clipboard) { + return window.navigator.clipboard.writeText(text); + } else { + return new Promise(function (resolve, reject) { + try { + const el = document.createElement("textarea"); + el.textContent = text; + el.style.position = "fixed"; + el.style.opacity = 0; + document.body.appendChild(el); + el.select(); + document.execCommand("copy"); + + resolve(); + } catch (err) { + reject(err); + } finally { + document.body.removeChild(el); + } + }); + } +} + +if (document.readyState === "loading") { + document.addEventListener("DOMContentLoaded", addCopyButtonCallbacks); +} else { + addCopyButtonCallbacks(); +} + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery', 'headroom', 'headroom-jquery'], function($, Headroom) { + +// Manages the top navigation bar (hides it when the user starts scrolling down on the +// mobile). +window.Headroom = Headroom; // work around buggy module loading? +$(document).ready(function () { + $("#documenter .docs-navbar").headroom({ + tolerance: { up: 10, down: 10 }, + }); +}); + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +$(document).ready(function () { + let meta = $("div[data-docstringscollapsed]").data(); + + if (meta?.docstringscollapsed) { + $("#documenter-article-toggle-button").trigger({ + type: "click", + noToggleAnimation: true, + }); + } +}); + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +/* +To get an in-depth about the thought process you can refer: https://hetarth02.hashnode.dev/series/gsoc + +PSEUDOCODE: + +Searching happens automatically as the user types or adjusts the selected filters. +To preserve responsiveness, as much as possible of the slow parts of the search are done +in a web worker. Searching and result generation are done in the worker, and filtering and +DOM updates are done in the main thread. The filters are in the main thread as they should +be very quick to apply. This lets filters be changed without re-searching with minisearch +(which is possible even if filtering is on the worker thread) and also lets filters be +changed _while_ the worker is searching and without message passing (neither of which are +possible if filtering is on the worker thread) + +SEARCH WORKER: + +Import minisearch + +Build index + +On message from main thread + run search + find the first 200 unique results from each category, and compute their divs for display + note that this is necessary and sufficient information for the main thread to find the + first 200 unique results from any given filter set + post results to main thread + +MAIN: + +Launch worker + +Declare nonconstant globals (worker_is_running, last_search_text, unfiltered_results) + +On text update + if worker is not running, launch_search() + +launch_search + set worker_is_running to true, set last_search_text to the search text + post the search query to worker + +on message from worker + if last_search_text is not the same as the text in the search field, + the latest search result is not reflective of the latest search query, so update again + launch_search() + otherwise + set worker_is_running to false + + regardless, display the new search results to the user + save the unfiltered_results as a global + update_search() + +on filter click + adjust the filter selection + update_search() + +update_search + apply search filters by looping through the unfiltered_results and finding the first 200 + unique results that match the filters + + Update the DOM +*/ + +/////// SEARCH WORKER /////// + +function worker_function(documenterSearchIndex, documenterBaseURL, filters) { + importScripts( + "https://cdn.jsdelivr.net/npm/minisearch@6.1.0/dist/umd/index.min.js" + ); + + let data = documenterSearchIndex.map((x, key) => { + x["id"] = key; // minisearch requires a unique for each object + return x; + }); + + // list below is the lunr 2.1.3 list minus the intersect with names(Base) + // (all, any, get, in, is, only, which) and (do, else, for, let, where, while, with) + // ideally we'd just filter the original list but it's not available as a variable + const stopWords = new Set([ + "a", + "able", + "about", + "across", + "after", + "almost", + "also", + "am", + "among", + "an", + "and", + "are", + "as", + "at", + "be", + "because", + "been", + "but", + "by", + "can", + "cannot", + "could", + "dear", + "did", + "does", + "either", + "ever", + "every", + "from", + "got", + "had", + "has", + "have", + "he", + "her", + "hers", + "him", + "his", + "how", + "however", + "i", + "if", + "into", + "it", + "its", + "just", + "least", + "like", + "likely", + "may", + "me", + "might", + "most", + "must", + "my", + "neither", + "no", + "nor", + "not", + "of", + "off", + "often", + "on", + "or", + "other", + "our", + "own", + "rather", + "said", + "say", + "says", + "she", + "should", + "since", + "so", + "some", + "than", + "that", + "the", + "their", + "them", + "then", + "there", + "these", + "they", + "this", + "tis", + "to", + "too", + "twas", + "us", + "wants", + "was", + "we", + "were", + "what", + "when", + "who", + "whom", + "why", + "will", + "would", + "yet", + "you", + "your", + ]); + + let index = new MiniSearch({ + fields: ["title", "text"], // fields to index for full-text search + storeFields: ["location", "title", "text", "category", "page"], // fields to return with results + processTerm: (term) => { + let word = stopWords.has(term) ? null : term; + if (word) { + // custom trimmer that doesn't strip @ and !, which are used in julia macro and function names + word = word + .replace(/^[^a-zA-Z0-9@!]+/, "") + .replace(/[^a-zA-Z0-9@!]+$/, ""); + + word = word.toLowerCase(); + } + + return word ?? null; + }, + // add . as a separator, because otherwise "title": "Documenter.Anchors.add!", would not + // find anything if searching for "add!", only for the entire qualification + tokenize: (string) => string.split(/[\s\-\.]+/), + // options which will be applied during the search + searchOptions: { + prefix: true, + boost: { title: 100 }, + fuzzy: 2, + }, + }); + + index.addAll(data); + + /** + * Used to map characters to HTML entities. + * Refer: https://github.com/lodash/lodash/blob/main/src/escape.ts + */ + const htmlEscapes = { + "&": "&", + "<": "<", + ">": ">", + '"': """, + "'": "'", + }; + + /** + * Used to match HTML entities and HTML characters. + * Refer: https://github.com/lodash/lodash/blob/main/src/escape.ts + */ + const reUnescapedHtml = /[&<>"']/g; + const reHasUnescapedHtml = RegExp(reUnescapedHtml.source); + + /** + * Escape function from lodash + * Refer: https://github.com/lodash/lodash/blob/main/src/escape.ts + */ + function escape(string) { + return string && reHasUnescapedHtml.test(string) + ? string.replace(reUnescapedHtml, (chr) => htmlEscapes[chr]) + : string || ""; + } + + /** + * Make the result component given a minisearch result data object and the value + * of the search input as queryString. To view the result object structure, refer: + * https://lucaong.github.io/minisearch/modules/_minisearch_.html#searchresult + * + * @param {object} result + * @param {string} querystring + * @returns string + */ + function make_search_result(result, querystring) { + let search_divider = `
`; + let display_link = + result.location.slice(Math.max(0), Math.min(50, result.location.length)) + + (result.location.length > 30 ? "..." : ""); // To cut-off the link because it messes with the overflow of the whole div + + if (result.page !== "") { + display_link += ` (${result.page})`; + } + + let textindex = new RegExp(`${querystring}`, "i").exec(result.text); + let text = + textindex !== null + ? result.text.slice( + Math.max(textindex.index - 100, 0), + Math.min( + textindex.index + querystring.length + 100, + result.text.length + ) + ) + : ""; // cut-off text before and after from the match + + text = text.length ? escape(text) : ""; + + let display_result = text.length + ? "..." + + text.replace( + new RegExp(`${escape(querystring)}`, "i"), // For first occurrence + '$&' + ) + + "..." + : ""; // highlights the match + + let in_code = false; + if (!["page", "section"].includes(result.category.toLowerCase())) { + in_code = true; + } + + // We encode the full url to escape some special characters which can lead to broken links + let result_div = ` + +
+
${escape(result.title)}
+
${result.category}
+
+

+ ${display_result} +

+
+ ${display_link} +
+
+ ${search_divider} + `; + + return result_div; + } + + self.onmessage = function (e) { + let query = e.data; + let results = index.search(query, { + filter: (result) => { + // Only return relevant results + return result.score >= 1; + }, + }); + + // Pre-filter to deduplicate and limit to 200 per category to the extent + // possible without knowing what the filters are. + let filtered_results = []; + let counts = {}; + for (let filter of filters) { + counts[filter] = 0; + } + let present = {}; + + for (let result of results) { + cat = result.category; + cnt = counts[cat]; + if (cnt < 200) { + id = cat + "---" + result.location; + if (present[id]) { + continue; + } + present[id] = true; + filtered_results.push({ + location: result.location, + category: cat, + div: make_search_result(result, query), + }); + } + } + + postMessage(filtered_results); + }; +} + +// `worker = Threads.@spawn worker_function(documenterSearchIndex)`, but in JavaScript! +const filters = [ + ...new Set(documenterSearchIndex["docs"].map((x) => x.category)), +]; +const worker_str = + "(" + + worker_function.toString() + + ")(" + + JSON.stringify(documenterSearchIndex["docs"]) + + "," + + JSON.stringify(documenterBaseURL) + + "," + + JSON.stringify(filters) + + ")"; +const worker_blob = new Blob([worker_str], { type: "text/javascript" }); +const worker = new Worker(URL.createObjectURL(worker_blob)); + +/////// SEARCH MAIN /////// + +// Whether the worker is currently handling a search. This is a boolean +// as the worker only ever handles 1 or 0 searches at a time. +var worker_is_running = false; + +// The last search text that was sent to the worker. This is used to determine +// if the worker should be launched again when it reports back results. +var last_search_text = ""; + +// The results of the last search. This, in combination with the state of the filters +// in the DOM, is used compute the results to display on calls to update_search. +var unfiltered_results = []; + +// Which filter is currently selected +var selected_filter = ""; + +$(document).on("input", ".documenter-search-input", function (event) { + if (!worker_is_running) { + launch_search(); + } +}); + +function launch_search() { + worker_is_running = true; + last_search_text = $(".documenter-search-input").val(); + worker.postMessage(last_search_text); +} + +worker.onmessage = function (e) { + if (last_search_text !== $(".documenter-search-input").val()) { + launch_search(); + } else { + worker_is_running = false; + } + + unfiltered_results = e.data; + update_search(); +}; + +$(document).on("click", ".search-filter", function () { + if ($(this).hasClass("search-filter-selected")) { + selected_filter = ""; + } else { + selected_filter = $(this).text().toLowerCase(); + } + + // This updates search results and toggles classes for UI: + update_search(); +}); + +/** + * Make/Update the search component + */ +function update_search() { + let querystring = $(".documenter-search-input").val(); + + if (querystring.trim()) { + if (selected_filter == "") { + results = unfiltered_results; + } else { + results = unfiltered_results.filter((result) => { + return selected_filter == result.category.toLowerCase(); + }); + } + + let search_result_container = ``; + let modal_filters = make_modal_body_filters(); + let search_divider = `
`; + + if (results.length) { + let links = []; + let count = 0; + let search_results = ""; + + for (var i = 0, n = results.length; i < n && count < 200; ++i) { + let result = results[i]; + if (result.location && !links.includes(result.location)) { + search_results += result.div; + count++; + links.push(result.location); + } + } + + if (count == 1) { + count_str = "1 result"; + } else if (count == 200) { + count_str = "200+ results"; + } else { + count_str = count + " results"; + } + let result_count = `
${count_str}
`; + + search_result_container = ` +
+ ${modal_filters} + ${search_divider} + ${result_count} +
+ ${search_results} +
+
+ `; + } else { + search_result_container = ` +
+ ${modal_filters} + ${search_divider} +
0 result(s)
+
+
No result found!
+ `; + } + + if ($(".search-modal-card-body").hasClass("is-justify-content-center")) { + $(".search-modal-card-body").removeClass("is-justify-content-center"); + } + + $(".search-modal-card-body").html(search_result_container); + } else { + if (!$(".search-modal-card-body").hasClass("is-justify-content-center")) { + $(".search-modal-card-body").addClass("is-justify-content-center"); + } + + $(".search-modal-card-body").html(` +
Type something to get started!
+ `); + } +} + +/** + * Make the modal filter html + * + * @returns string + */ +function make_modal_body_filters() { + let str = filters + .map((val) => { + if (selected_filter == val.toLowerCase()) { + return `${val}`; + } else { + return `${val}`; + } + }) + .join(""); + + return ` +
+ Filters: + ${str} +
`; +} + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +// Modal settings dialog +$(document).ready(function () { + var settings = $("#documenter-settings"); + $("#documenter-settings-button").click(function () { + settings.toggleClass("is-active"); + }); + // Close the dialog if X is clicked + $("#documenter-settings button.delete").click(function () { + settings.removeClass("is-active"); + }); + // Close dialog if ESC is pressed + $(document).keyup(function (e) { + if (e.keyCode == 27) settings.removeClass("is-active"); + }); +}); + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +$(document).ready(function () { + let search_modal_header = ` + + `; + + let initial_search_body = ` +
Type something to get started!
+ `; + + let search_modal_footer = ` + + `; + + $(document.body).append( + ` + + ` + ); + + document.querySelector(".docs-search-query").addEventListener("click", () => { + openModal(); + }); + + document + .querySelector(".close-search-modal") + .addEventListener("click", () => { + closeModal(); + }); + + $(document).on("click", ".search-result-link", function () { + closeModal(); + }); + + document.addEventListener("keydown", (event) => { + if ((event.ctrlKey || event.metaKey) && event.key === "/") { + openModal(); + } else if (event.key === "Escape") { + closeModal(); + } + + return false; + }); + + // Functions to open and close a modal + function openModal() { + let searchModal = document.querySelector("#search-modal"); + + searchModal.classList.add("is-active"); + document.querySelector(".documenter-search-input").focus(); + } + + function closeModal() { + let searchModal = document.querySelector("#search-modal"); + let initial_search_body = ` +
Type something to get started!
+ `; + + searchModal.classList.remove("is-active"); + document.querySelector(".documenter-search-input").blur(); + + if (!$(".search-modal-card-body").hasClass("is-justify-content-center")) { + $(".search-modal-card-body").addClass("is-justify-content-center"); + } + + $(".documenter-search-input").val(""); + $(".search-modal-card-body").html(initial_search_body); + } + + document + .querySelector("#search-modal .modal-background") + .addEventListener("click", () => { + closeModal(); + }); +}); + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +// Manages the showing and hiding of the sidebar. +$(document).ready(function () { + var sidebar = $("#documenter > .docs-sidebar"); + var sidebar_button = $("#documenter-sidebar-button"); + sidebar_button.click(function (ev) { + ev.preventDefault(); + sidebar.toggleClass("visible"); + if (sidebar.hasClass("visible")) { + // Makes sure that the current menu item is visible in the sidebar. + $("#documenter .docs-menu a.is-active").focus(); + } + }); + $("#documenter > .docs-main").bind("click", function (ev) { + if ($(ev.target).is(sidebar_button)) { + return; + } + if (sidebar.hasClass("visible")) { + sidebar.removeClass("visible"); + } + }); +}); + +// Resizes the package name / sitename in the sidebar if it is too wide. +// Inspired by: https://github.com/davatron5000/FitText.js +$(document).ready(function () { + e = $("#documenter .docs-autofit"); + function resize() { + var L = parseInt(e.css("max-width"), 10); + var L0 = e.width(); + if (L0 > L) { + var h0 = parseInt(e.css("font-size"), 10); + e.css("font-size", (L * h0) / L0); + // TODO: make sure it survives resizes? + } + } + // call once and then register events + resize(); + $(window).resize(resize); + $(window).on("orientationchange", resize); +}); + +// Scroll the navigation bar to the currently selected menu item +$(document).ready(function () { + var sidebar = $("#documenter .docs-menu").get(0); + var active = $("#documenter .docs-menu .is-active").get(0); + if (typeof active !== "undefined") { + sidebar.scrollTop = active.offsetTop - sidebar.offsetTop - 15; + } +}); + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +// Theme picker setup +$(document).ready(function () { + // onchange callback + $("#documenter-themepicker").change(function themepick_callback(ev) { + var themename = $("#documenter-themepicker option:selected").attr("value"); + if (themename === "auto") { + // set_theme(window.matchMedia('(prefers-color-scheme: dark)').matches ? 'dark' : 'light'); + window.localStorage.removeItem("documenter-theme"); + } else { + // set_theme(themename); + window.localStorage.setItem("documenter-theme", themename); + } + // We re-use the global function from themeswap.js to actually do the swapping. + set_theme_from_local_storage(); + }); + + // Make sure that the themepicker displays the correct theme when the theme is retrieved + // from localStorage + if (typeof window.localStorage !== "undefined") { + var theme = window.localStorage.getItem("documenter-theme"); + if (theme !== null) { + $("#documenter-themepicker option").each(function (i, e) { + e.selected = e.value === theme; + }); + } + } +}); + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +// update the version selector with info from the siteinfo.js and ../versions.js files +$(document).ready(function () { + // If the version selector is disabled with DOCUMENTER_VERSION_SELECTOR_DISABLED in the + // siteinfo.js file, we just return immediately and not display the version selector. + if ( + typeof DOCUMENTER_VERSION_SELECTOR_DISABLED === "boolean" && + DOCUMENTER_VERSION_SELECTOR_DISABLED + ) { + return; + } + + var version_selector = $("#documenter .docs-version-selector"); + var version_selector_select = $("#documenter .docs-version-selector select"); + + version_selector_select.change(function (x) { + target_href = version_selector_select + .children("option:selected") + .get(0).value; + window.location.href = target_href; + }); + + // add the current version to the selector based on siteinfo.js, but only if the selector is empty + if ( + typeof DOCUMENTER_CURRENT_VERSION !== "undefined" && + $("#version-selector > option").length == 0 + ) { + var option = $( + "" + ); + version_selector_select.append(option); + } + + if (typeof DOC_VERSIONS !== "undefined") { + var existing_versions = version_selector_select.children("option"); + var existing_versions_texts = existing_versions.map(function (i, x) { + return x.text; + }); + DOC_VERSIONS.forEach(function (each) { + var version_url = documenterBaseURL + "/../" + each + "/"; + var existing_id = $.inArray(each, existing_versions_texts); + // if not already in the version selector, add it as a new option, + // otherwise update the old option with the URL and enable it + if (existing_id == -1) { + var option = $( + "" + ); + version_selector_select.append(option); + } else { + var option = existing_versions[existing_id]; + option.value = version_url; + option.disabled = false; + } + }); + } + + // only show the version selector if the selector has been populated + if (version_selector_select.children("option").length > 0) { + version_selector.toggleClass("visible"); + } +}); + +}) diff --git a/v2.1.2/assets/favicon.ico b/v2.1.2/assets/favicon.ico new file mode 100644 index 00000000..3c6bd470 Binary files /dev/null and b/v2.1.2/assets/favicon.ico differ diff --git a/v2.1.2/assets/logo.png b/v2.1.2/assets/logo.png new file mode 100644 index 00000000..6f4c3e26 Binary files /dev/null and b/v2.1.2/assets/logo.png differ diff --git a/v2.1.2/assets/themes/documenter-dark.css b/v2.1.2/assets/themes/documenter-dark.css new file mode 100644 index 00000000..1d717015 --- /dev/null +++ b/v2.1.2/assets/themes/documenter-dark.css @@ -0,0 +1,7 @@ +html.theme--documenter-dark .pagination-previous,html.theme--documenter-dark .pagination-next,html.theme--documenter-dark .pagination-link,html.theme--documenter-dark .pagination-ellipsis,html.theme--documenter-dark .file-cta,html.theme--documenter-dark .file-name,html.theme--documenter-dark .select select,html.theme--documenter-dark .textarea,html.theme--documenter-dark .input,html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input,html.theme--documenter-dark .button{-moz-appearance:none;-webkit-appearance:none;align-items:center;border:1px solid transparent;border-radius:.4em;box-shadow:none;display:inline-flex;font-size:1rem;height:2.5em;justify-content:flex-start;line-height:1.5;padding-bottom:calc(0.5em - 1px);padding-left:calc(0.75em - 1px);padding-right:calc(0.75em - 1px);padding-top:calc(0.5em - 1px);position:relative;vertical-align:top}html.theme--documenter-dark .pagination-previous:focus,html.theme--documenter-dark .pagination-next:focus,html.theme--documenter-dark .pagination-link:focus,html.theme--documenter-dark .pagination-ellipsis:focus,html.theme--documenter-dark .file-cta:focus,html.theme--documenter-dark .file-name:focus,html.theme--documenter-dark .select select:focus,html.theme--documenter-dark .textarea:focus,html.theme--documenter-dark .input:focus,html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input:focus,html.theme--documenter-dark .button:focus,html.theme--documenter-dark .is-focused.pagination-previous,html.theme--documenter-dark .is-focused.pagination-next,html.theme--documenter-dark .is-focused.pagination-link,html.theme--documenter-dark .is-focused.pagination-ellipsis,html.theme--documenter-dark .is-focused.file-cta,html.theme--documenter-dark .is-focused.file-name,html.theme--documenter-dark .select select.is-focused,html.theme--documenter-dark .is-focused.textarea,html.theme--documenter-dark .is-focused.input,html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input.is-focused,html.theme--documenter-dark .is-focused.button,html.theme--documenter-dark .pagination-previous:active,html.theme--documenter-dark .pagination-next:active,html.theme--documenter-dark .pagination-link:active,html.theme--documenter-dark .pagination-ellipsis:active,html.theme--documenter-dark .file-cta:active,html.theme--documenter-dark .file-name:active,html.theme--documenter-dark .select select:active,html.theme--documenter-dark .textarea:active,html.theme--documenter-dark .input:active,html.theme--documenter-dark 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html.theme--documenter-dark .button.is-white.is-inverted.is-outlined{background-color:transparent;border-color:#0a0a0a;box-shadow:none;color:#0a0a0a}html.theme--documenter-dark .button.is-black{background-color:#0a0a0a;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-black:hover,html.theme--documenter-dark .button.is-black.is-hovered{background-color:#040404;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-black:focus,html.theme--documenter-dark .button.is-black.is-focused{border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-black:focus:not(:active),html.theme--documenter-dark .button.is-black.is-focused:not(:active){box-shadow:0 0 0 0.125em rgba(10,10,10,0.25)}html.theme--documenter-dark .button.is-black:active,html.theme--documenter-dark .button.is-black.is-active{background-color:#000;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-black[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-black{background-color:#0a0a0a;border-color:#0a0a0a;box-shadow:none}html.theme--documenter-dark .button.is-black.is-inverted{background-color:#fff;color:#0a0a0a}html.theme--documenter-dark .button.is-black.is-inverted:hover,html.theme--documenter-dark .button.is-black.is-inverted.is-hovered{background-color:#f2f2f2}html.theme--documenter-dark .button.is-black.is-inverted[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-black.is-inverted{background-color:#fff;border-color:transparent;box-shadow:none;color:#0a0a0a}html.theme--documenter-dark .button.is-black.is-loading::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-black.is-outlined{background-color:transparent;border-color:#0a0a0a;color:#0a0a0a}html.theme--documenter-dark .button.is-black.is-outlined:hover,html.theme--documenter-dark .button.is-black.is-outlined.is-hovered,html.theme--documenter-dark 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html.theme--documenter-dark .button.is-black.is-inverted.is-outlined{background-color:transparent;border-color:#fff;box-shadow:none;color:#fff}html.theme--documenter-dark .button.is-light{background-color:#ecf0f1;border-color:transparent;color:rgba(0,0,0,0.7)}html.theme--documenter-dark .button.is-light:hover,html.theme--documenter-dark .button.is-light.is-hovered{background-color:#e5eaec;border-color:transparent;color:rgba(0,0,0,0.7)}html.theme--documenter-dark .button.is-light:focus,html.theme--documenter-dark .button.is-light.is-focused{border-color:transparent;color:rgba(0,0,0,0.7)}html.theme--documenter-dark .button.is-light:focus:not(:active),html.theme--documenter-dark .button.is-light.is-focused:not(:active){box-shadow:0 0 0 0.125em rgba(236,240,241,0.25)}html.theme--documenter-dark .button.is-light:active,html.theme--documenter-dark .button.is-light.is-active{background-color:#dde4e6;border-color:transparent;color:rgba(0,0,0,0.7)}html.theme--documenter-dark 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kbd.button{background-color:#282f2f;border-color:#282f2f;box-shadow:none}html.theme--documenter-dark .button.is-dark.is-inverted,html.theme--documenter-dark .content kbd.button.is-inverted{background-color:#fff;color:#282f2f}html.theme--documenter-dark .button.is-dark.is-inverted:hover,html.theme--documenter-dark .content kbd.button.is-inverted:hover,html.theme--documenter-dark .button.is-dark.is-inverted.is-hovered,html.theme--documenter-dark .content kbd.button.is-inverted.is-hovered{background-color:#f2f2f2}html.theme--documenter-dark .button.is-dark.is-inverted[disabled],html.theme--documenter-dark .content kbd.button.is-inverted[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-dark.is-inverted,fieldset[disabled] html.theme--documenter-dark .content kbd.button.is-inverted{background-color:#fff;border-color:transparent;box-shadow:none;color:#282f2f}html.theme--documenter-dark .button.is-dark.is-loading::after,html.theme--documenter-dark .content kbd.button.is-loading::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-dark.is-outlined,html.theme--documenter-dark .content kbd.button.is-outlined{background-color:transparent;border-color:#282f2f;color:#282f2f}html.theme--documenter-dark .button.is-dark.is-outlined:hover,html.theme--documenter-dark .content kbd.button.is-outlined:hover,html.theme--documenter-dark .button.is-dark.is-outlined.is-hovered,html.theme--documenter-dark .content kbd.button.is-outlined.is-hovered,html.theme--documenter-dark .button.is-dark.is-outlined:focus,html.theme--documenter-dark .content kbd.button.is-outlined:focus,html.theme--documenter-dark .button.is-dark.is-outlined.is-focused,html.theme--documenter-dark .content kbd.button.is-outlined.is-focused{background-color:#282f2f;border-color:#282f2f;color:#fff}html.theme--documenter-dark .button.is-dark.is-outlined.is-loading::after,html.theme--documenter-dark .content kbd.button.is-outlined.is-loading::after{border-color:transparent transparent #282f2f #282f2f !important}html.theme--documenter-dark .button.is-dark.is-outlined.is-loading:hover::after,html.theme--documenter-dark .content kbd.button.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-dark.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .content kbd.button.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-dark.is-outlined.is-loading:focus::after,html.theme--documenter-dark .content kbd.button.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-dark.is-outlined.is-loading.is-focused::after,html.theme--documenter-dark .content kbd.button.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-dark.is-outlined[disabled],html.theme--documenter-dark .content kbd.button.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-dark.is-outlined,fieldset[disabled] html.theme--documenter-dark .content kbd.button.is-outlined{background-color:transparent;border-color:#282f2f;box-shadow:none;color:#282f2f}html.theme--documenter-dark .button.is-dark.is-inverted.is-outlined,html.theme--documenter-dark .content kbd.button.is-inverted.is-outlined{background-color:transparent;border-color:#fff;color:#fff}html.theme--documenter-dark .button.is-dark.is-inverted.is-outlined:hover,html.theme--documenter-dark .content kbd.button.is-inverted.is-outlined:hover,html.theme--documenter-dark .button.is-dark.is-inverted.is-outlined.is-hovered,html.theme--documenter-dark .content kbd.button.is-inverted.is-outlined.is-hovered,html.theme--documenter-dark .button.is-dark.is-inverted.is-outlined:focus,html.theme--documenter-dark .content kbd.button.is-inverted.is-outlined:focus,html.theme--documenter-dark .button.is-dark.is-inverted.is-outlined.is-focused,html.theme--documenter-dark .content 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.button.is-success.is-light.is-hovered{background-color:#deffec;border-color:transparent;color:#00eb64}html.theme--documenter-dark .button.is-success.is-light:active,html.theme--documenter-dark .button.is-success.is-light.is-active{background-color:#d1ffe5;border-color:transparent;color:#00eb64}html.theme--documenter-dark .button.is-warning{background-color:#ad8100;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-warning:hover,html.theme--documenter-dark .button.is-warning.is-hovered{background-color:#a07700;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-warning:focus,html.theme--documenter-dark .button.is-warning.is-focused{border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-warning:focus:not(:active),html.theme--documenter-dark .button.is-warning.is-focused:not(:active){box-shadow:0 0 0 0.125em rgba(173,129,0,0.25)}html.theme--documenter-dark .button.is-warning:active,html.theme--documenter-dark .button.is-warning.is-active{background-color:#946e00;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-warning[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-warning{background-color:#ad8100;border-color:#ad8100;box-shadow:none}html.theme--documenter-dark .button.is-warning.is-inverted{background-color:#fff;color:#ad8100}html.theme--documenter-dark .button.is-warning.is-inverted:hover,html.theme--documenter-dark .button.is-warning.is-inverted.is-hovered{background-color:#f2f2f2}html.theme--documenter-dark .button.is-warning.is-inverted[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-warning.is-inverted{background-color:#fff;border-color:transparent;box-shadow:none;color:#ad8100}html.theme--documenter-dark .button.is-warning.is-loading::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark 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.button.is-warning.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-warning.is-outlined{background-color:transparent;border-color:#ad8100;box-shadow:none;color:#ad8100}html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined{background-color:transparent;border-color:#fff;color:#fff}html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined:hover,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-hovered,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined:focus,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-focused{background-color:#fff;color:#ad8100}html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #ad8100 #ad8100 !important}html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined{background-color:transparent;border-color:#fff;box-shadow:none;color:#fff}html.theme--documenter-dark .button.is-warning.is-light{background-color:#fffaeb;color:#d19c00}html.theme--documenter-dark .button.is-warning.is-light:hover,html.theme--documenter-dark .button.is-warning.is-light.is-hovered{background-color:#fff7de;border-color:transparent;color:#d19c00}html.theme--documenter-dark .button.is-warning.is-light:active,html.theme--documenter-dark .button.is-warning.is-light.is-active{background-color:#fff3d1;border-color:transparent;color:#d19c00}html.theme--documenter-dark .button.is-danger{background-color:#9e1b0d;border-color:transparent;color:#fff}html.theme--documenter-dark 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.button.is-danger.is-inverted:hover,html.theme--documenter-dark .button.is-danger.is-inverted.is-hovered{background-color:#f2f2f2}html.theme--documenter-dark .button.is-danger.is-inverted[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-danger.is-inverted{background-color:#fff;border-color:transparent;box-shadow:none;color:#9e1b0d}html.theme--documenter-dark .button.is-danger.is-loading::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-danger.is-outlined{background-color:transparent;border-color:#9e1b0d;color:#9e1b0d}html.theme--documenter-dark .button.is-danger.is-outlined:hover,html.theme--documenter-dark .button.is-danger.is-outlined.is-hovered,html.theme--documenter-dark .button.is-danger.is-outlined:focus,html.theme--documenter-dark .button.is-danger.is-outlined.is-focused{background-color:#9e1b0d;border-color:#9e1b0d;color:#fff}html.theme--documenter-dark .button.is-danger.is-outlined.is-loading::after{border-color:transparent transparent #9e1b0d #9e1b0d !important}html.theme--documenter-dark .button.is-danger.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-danger.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-danger.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-danger.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-danger.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-danger.is-outlined{background-color:transparent;border-color:#9e1b0d;box-shadow:none;color:#9e1b0d}html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined{background-color:transparent;border-color:#fff;color:#fff}html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined:hover,html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined.is-hovered,html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined:focus,html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined.is-focused{background-color:#fff;color:#9e1b0d}html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #9e1b0d #9e1b0d !important}html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined{background-color:transparent;border-color:#fff;box-shadow:none;color:#fff}html.theme--documenter-dark .button.is-danger.is-light{background-color:#fdeeec;color:#ec311d}html.theme--documenter-dark .button.is-danger.is-light:hover,html.theme--documenter-dark .button.is-danger.is-light.is-hovered{background-color:#fce3e0;border-color:transparent;color:#ec311d}html.theme--documenter-dark .button.is-danger.is-light:active,html.theme--documenter-dark .button.is-danger.is-light.is-active{background-color:#fcd8d5;border-color:transparent;color:#ec311d}html.theme--documenter-dark .button.is-small,html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input.button{font-size:.75rem}html.theme--documenter-dark .button.is-small:not(.is-rounded),html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input.button:not(.is-rounded){border-radius:3px}html.theme--documenter-dark .button.is-normal{font-size:1rem}html.theme--documenter-dark .button.is-medium{font-size:1.25rem}html.theme--documenter-dark .button.is-large{font-size:1.5rem}html.theme--documenter-dark .button[disabled],fieldset[disabled] html.theme--documenter-dark .button{background-color:#8c9b9d;border-color:#5e6d6f;box-shadow:none;opacity:.5}html.theme--documenter-dark .button.is-fullwidth{display:flex;width:100%}html.theme--documenter-dark .button.is-loading{color:transparent !important;pointer-events:none}html.theme--documenter-dark .button.is-loading::after{position:absolute;left:calc(50% - (1em * 0.5));top:calc(50% - (1em * 0.5));position:absolute !important}html.theme--documenter-dark .button.is-static{background-color:#282f2f;border-color:#5e6d6f;color:#dbdee0;box-shadow:none;pointer-events:none}html.theme--documenter-dark .button.is-rounded,html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input.button{border-radius:9999px;padding-left:calc(1em + 0.25em);padding-right:calc(1em + 0.25em)}html.theme--documenter-dark .buttons{align-items:center;display:flex;flex-wrap:wrap;justify-content:flex-start}html.theme--documenter-dark .buttons .button{margin-bottom:0.5rem}html.theme--documenter-dark .buttons .button:not(:last-child):not(.is-fullwidth){margin-right:.5rem}html.theme--documenter-dark .buttons:last-child{margin-bottom:-0.5rem}html.theme--documenter-dark .buttons:not(:last-child){margin-bottom:1rem}html.theme--documenter-dark .buttons.are-small .button:not(.is-normal):not(.is-medium):not(.is-large){font-size:.75rem}html.theme--documenter-dark .buttons.are-small .button:not(.is-normal):not(.is-medium):not(.is-large):not(.is-rounded){border-radius:3px}html.theme--documenter-dark .buttons.are-medium .button:not(.is-small):not(.is-normal):not(.is-large){font-size:1.25rem}html.theme--documenter-dark .buttons.are-large .button:not(.is-small):not(.is-normal):not(.is-medium){font-size:1.5rem}html.theme--documenter-dark .buttons.has-addons .button:not(:first-child){border-bottom-left-radius:0;border-top-left-radius:0}html.theme--documenter-dark .buttons.has-addons .button:not(:last-child){border-bottom-right-radius:0;border-top-right-radius:0;margin-right:-1px}html.theme--documenter-dark .buttons.has-addons .button:last-child{margin-right:0}html.theme--documenter-dark .buttons.has-addons .button:hover,html.theme--documenter-dark .buttons.has-addons .button.is-hovered{z-index:2}html.theme--documenter-dark .buttons.has-addons .button:focus,html.theme--documenter-dark .buttons.has-addons .button.is-focused,html.theme--documenter-dark .buttons.has-addons .button:active,html.theme--documenter-dark .buttons.has-addons .button.is-active,html.theme--documenter-dark .buttons.has-addons .button.is-selected{z-index:3}html.theme--documenter-dark .buttons.has-addons .button:focus:hover,html.theme--documenter-dark .buttons.has-addons .button.is-focused:hover,html.theme--documenter-dark .buttons.has-addons .button:active:hover,html.theme--documenter-dark .buttons.has-addons .button.is-active:hover,html.theme--documenter-dark .buttons.has-addons .button.is-selected:hover{z-index:4}html.theme--documenter-dark .buttons.has-addons .button.is-expanded{flex-grow:1;flex-shrink:1}html.theme--documenter-dark .buttons.is-centered{justify-content:center}html.theme--documenter-dark .buttons.is-centered:not(.has-addons) .button:not(.is-fullwidth){margin-left:0.25rem;margin-right:0.25rem}html.theme--documenter-dark .buttons.is-right{justify-content:flex-end}html.theme--documenter-dark .buttons.is-right:not(.has-addons) .button:not(.is-fullwidth){margin-left:0.25rem;margin-right:0.25rem}@media screen and (max-width: 768px){html.theme--documenter-dark .button.is-responsive.is-small,html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input.is-responsive{font-size:.5625rem}html.theme--documenter-dark .button.is-responsive,html.theme--documenter-dark .button.is-responsive.is-normal{font-size:.65625rem}html.theme--documenter-dark .button.is-responsive.is-medium{font-size:.75rem}html.theme--documenter-dark .button.is-responsive.is-large{font-size:1rem}}@media screen and (min-width: 769px) and (max-width: 1055px){html.theme--documenter-dark .button.is-responsive.is-small,html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input.is-responsive{font-size:.65625rem}html.theme--documenter-dark .button.is-responsive,html.theme--documenter-dark .button.is-responsive.is-normal{font-size:.75rem}html.theme--documenter-dark .button.is-responsive.is-medium{font-size:1rem}html.theme--documenter-dark .button.is-responsive.is-large{font-size:1.25rem}}html.theme--documenter-dark .container{flex-grow:1;margin:0 auto;position:relative;width:auto}html.theme--documenter-dark .container.is-fluid{max-width:none !important;padding-left:32px;padding-right:32px;width:100%}@media screen and (min-width: 1056px){html.theme--documenter-dark .container{max-width:992px}}@media screen and (max-width: 1215px){html.theme--documenter-dark .container.is-widescreen:not(.is-max-desktop){max-width:1152px}}@media screen and (max-width: 1407px){html.theme--documenter-dark .container.is-fullhd:not(.is-max-desktop):not(.is-max-widescreen){max-width:1344px}}@media screen and (min-width: 1216px){html.theme--documenter-dark .container:not(.is-max-desktop){max-width:1152px}}@media screen and (min-width: 1408px){html.theme--documenter-dark .container:not(.is-max-desktop):not(.is-max-widescreen){max-width:1344px}}html.theme--documenter-dark .content li+li{margin-top:0.25em}html.theme--documenter-dark .content p:not(:last-child),html.theme--documenter-dark .content dl:not(:last-child),html.theme--documenter-dark .content ol:not(:last-child),html.theme--documenter-dark .content ul:not(:last-child),html.theme--documenter-dark .content blockquote:not(:last-child),html.theme--documenter-dark .content pre:not(:last-child),html.theme--documenter-dark .content table:not(:last-child){margin-bottom:1em}html.theme--documenter-dark .content h1,html.theme--documenter-dark .content h2,html.theme--documenter-dark .content h3,html.theme--documenter-dark .content h4,html.theme--documenter-dark .content h5,html.theme--documenter-dark .content h6{color:#f2f2f2;font-weight:600;line-height:1.125}html.theme--documenter-dark .content h1{font-size:2em;margin-bottom:0.5em}html.theme--documenter-dark .content h1:not(:first-child){margin-top:1em}html.theme--documenter-dark .content h2{font-size:1.75em;margin-bottom:0.5714em}html.theme--documenter-dark .content h2:not(:first-child){margin-top:1.1428em}html.theme--documenter-dark .content h3{font-size:1.5em;margin-bottom:0.6666em}html.theme--documenter-dark .content h3:not(:first-child){margin-top:1.3333em}html.theme--documenter-dark .content h4{font-size:1.25em;margin-bottom:0.8em}html.theme--documenter-dark .content h5{font-size:1.125em;margin-bottom:0.8888em}html.theme--documenter-dark .content h6{font-size:1em;margin-bottom:1em}html.theme--documenter-dark .content blockquote{background-color:#282f2f;border-left:5px solid #5e6d6f;padding:1.25em 1.5em}html.theme--documenter-dark .content ol{list-style-position:outside;margin-left:2em;margin-top:1em}html.theme--documenter-dark .content ol:not([type]){list-style-type:decimal}html.theme--documenter-dark .content ol.is-lower-alpha:not([type]){list-style-type:lower-alpha}html.theme--documenter-dark .content ol.is-lower-roman:not([type]){list-style-type:lower-roman}html.theme--documenter-dark .content ol.is-upper-alpha:not([type]){list-style-type:upper-alpha}html.theme--documenter-dark .content ol.is-upper-roman:not([type]){list-style-type:upper-roman}html.theme--documenter-dark .content ul{list-style:disc outside;margin-left:2em;margin-top:1em}html.theme--documenter-dark .content ul ul{list-style-type:circle;margin-top:0.5em}html.theme--documenter-dark .content ul ul ul{list-style-type:square}html.theme--documenter-dark .content dd{margin-left:2em}html.theme--documenter-dark .content figure{margin-left:2em;margin-right:2em;text-align:center}html.theme--documenter-dark .content figure:not(:first-child){margin-top:2em}html.theme--documenter-dark .content figure:not(:last-child){margin-bottom:2em}html.theme--documenter-dark .content figure img{display:inline-block}html.theme--documenter-dark .content figure figcaption{font-style:italic}html.theme--documenter-dark .content pre{-webkit-overflow-scrolling:touch;overflow-x:auto;padding:0;white-space:pre;word-wrap:normal}html.theme--documenter-dark .content sup,html.theme--documenter-dark .content sub{font-size:75%}html.theme--documenter-dark .content table{width:100%}html.theme--documenter-dark .content table td,html.theme--documenter-dark .content table th{border:1px solid #5e6d6f;border-width:0 0 1px;padding:0.5em 0.75em;vertical-align:top}html.theme--documenter-dark .content table th{color:#f2f2f2}html.theme--documenter-dark .content table th:not([align]){text-align:inherit}html.theme--documenter-dark .content table thead td,html.theme--documenter-dark .content table thead th{border-width:0 0 2px;color:#f2f2f2}html.theme--documenter-dark .content table tfoot td,html.theme--documenter-dark .content table tfoot th{border-width:2px 0 0;color:#f2f2f2}html.theme--documenter-dark .content table tbody tr:last-child td,html.theme--documenter-dark .content table tbody tr:last-child th{border-bottom-width:0}html.theme--documenter-dark .content .tabs li+li{margin-top:0}html.theme--documenter-dark .content.is-small,html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input.content{font-size:.75rem}html.theme--documenter-dark .content.is-normal{font-size:1rem}html.theme--documenter-dark .content.is-medium{font-size:1.25rem}html.theme--documenter-dark .content.is-large{font-size:1.5rem}html.theme--documenter-dark .icon{align-items:center;display:inline-flex;justify-content:center;height:1.5rem;width:1.5rem}html.theme--documenter-dark .icon.is-small,html.theme--documenter-dark #documenter 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.hljs-string{color:#38a}.hljs-emphasis{font-style:italic}.hljs-strong{font-weight:bold}.gap-4{gap:1rem} diff --git a/v2.1.2/assets/themeswap.js b/v2.1.2/assets/themeswap.js new file mode 100644 index 00000000..9f5eebe6 --- /dev/null +++ b/v2.1.2/assets/themeswap.js @@ -0,0 +1,84 @@ +// Small function to quickly swap out themes. Gets put into the tag.. +function set_theme_from_local_storage() { + // Initialize the theme to null, which means default + var theme = null; + // If the browser supports the localstorage and is not disabled then try to get the + // documenter theme + if (window.localStorage != null) { + // Get the user-picked theme from localStorage. May be `null`, which means the default + // theme. + theme = window.localStorage.getItem("documenter-theme"); + } + // Check if the users preference is for dark color scheme + var darkPreference = + window.matchMedia("(prefers-color-scheme: dark)").matches === true; + // Initialize a few variables for the loop: + // + // - active: will contain the index of the theme that should be active. Note that there + // is no guarantee that localStorage contains sane values. If `active` stays `null` + // we either could not find the theme or it is the default (primary) theme anyway. + // Either way, we then need to stick to the primary theme. + // + // - disabled: style sheets that should be disabled (i.e. all the theme style sheets + // that are not the currently active theme) + var active = null; + var disabled = []; + var primaryLightTheme = null; + var primaryDarkTheme = null; + for (var i = 0; i < document.styleSheets.length; i++) { + var ss = document.styleSheets[i]; + // The tag of each style sheet is expected to have a data-theme-name attribute + // which must contain the name of the theme. The names in localStorage much match this. + var themename = ss.ownerNode.getAttribute("data-theme-name"); + // attribute not set => non-theme stylesheet => ignore + if (themename === null) continue; + // To distinguish the default (primary) theme, it needs to have the data-theme-primary + // attribute set. + if (ss.ownerNode.getAttribute("data-theme-primary") !== null) { + primaryLightTheme = themename; + } + // Check if the theme is primary dark theme so that we could store its name in darkTheme + if (ss.ownerNode.getAttribute("data-theme-primary-dark") !== null) { + primaryDarkTheme = themename; + } + // If we find a matching theme (and it's not the default), we'll set active to non-null + if (themename === theme) active = i; + // Store the style sheets of inactive themes so that we could disable them + if (themename !== theme) disabled.push(ss); + } + var activeTheme = null; + if (active !== null) { + // If we did find an active theme, we'll (1) add the theme--$(theme) class to + document.getElementsByTagName("html")[0].className = "theme--" + theme; + activeTheme = theme; + } else { + // If we did _not_ find an active theme, then we need to fall back to the primary theme + // which can either be dark or light, depending on the user's OS preference. + var activeTheme = darkPreference ? primaryDarkTheme : primaryLightTheme; + // In case it somehow happens that the relevant primary theme was not found in the + // preceding loop, we abort without doing anything. + if (activeTheme === null) { + console.error("Unable to determine primary theme."); + return; + } + // When switching to the primary light theme, then we must not have a class name + // for the tag. That's only for non-primary or the primary dark theme. + if (darkPreference) { + document.getElementsByTagName("html")[0].className = + "theme--" + activeTheme; + } else { + document.getElementsByTagName("html")[0].className = ""; + } + } + for (var i = 0; i < document.styleSheets.length; i++) { + var ss = document.styleSheets[i]; + // The tag of each style sheet is expected to have a data-theme-name attribute + // which must contain the name of the theme. The names in localStorage much match this. + var themename = ss.ownerNode.getAttribute("data-theme-name"); + // attribute not set => non-theme stylesheet => ignore + if (themename === null) continue; + // we'll disable all the stylesheets, except for the active one + ss.disabled = !(themename == activeTheme); + } +} +set_theme_from_local_storage(); diff --git a/v2.1.2/assets/warner.js b/v2.1.2/assets/warner.js new file mode 100644 index 00000000..3f6f5d00 --- /dev/null +++ b/v2.1.2/assets/warner.js @@ -0,0 +1,52 @@ +function maybeAddWarning() { + // DOCUMENTER_NEWEST is defined in versions.js, DOCUMENTER_CURRENT_VERSION and DOCUMENTER_STABLE + // in siteinfo.js. + // If either of these are undefined something went horribly wrong, so we abort. + if ( + window.DOCUMENTER_NEWEST === undefined || + window.DOCUMENTER_CURRENT_VERSION === undefined || + window.DOCUMENTER_STABLE === undefined + ) { + return; + } + + // Current version is not a version number, so we can't tell if it's the newest version. Abort. + if (!/v(\d+\.)*\d+/.test(window.DOCUMENTER_CURRENT_VERSION)) { + return; + } + + // Current version is newest version, so no need to add a warning. + if (window.DOCUMENTER_NEWEST === window.DOCUMENTER_CURRENT_VERSION) { + return; + } + + // Add a noindex meta tag (unless one exists) so that search engines don't index this version of the docs. + if (document.body.querySelector('meta[name="robots"]') === null) { + const meta = document.createElement("meta"); + meta.name = "robots"; + meta.content = "noindex"; + + document.getElementsByTagName("head")[0].appendChild(meta); + } + + const div = document.createElement("div"); + div.classList.add("outdated-warning-overlay"); + const closer = document.createElement("button"); + closer.classList.add("outdated-warning-closer", "delete"); + closer.addEventListener("click", function () { + document.body.removeChild(div); + }); + const href = window.documenterBaseURL + "/../" + window.DOCUMENTER_STABLE; + div.innerHTML = + 'This documentation is not for the latest stable release, but for either the development version or an older release.
Click here to go to the documentation for the latest stable release.'; + div.appendChild(closer); + document.body.appendChild(div); +} + +if (document.readyState === "loading") { + document.addEventListener("DOMContentLoaded", maybeAddWarning); +} else { + maybeAddWarning(); +} diff --git a/v2.1.2/index.html b/v2.1.2/index.html new file mode 100644 index 00000000..e97c4710 --- /dev/null +++ b/v2.1.2/index.html @@ -0,0 +1,416 @@ + +Home · Deep Equilibrium Networks

DeepEquilibriumNetworks.jl

DeepEquilibriumNetworks.jl is a framework built on top of DifferentialEquations.jl and Lux.jl, enabling the efficient training and inference for Deep Equilibrium Networks (Infinitely Deep Neural Networks).

Installation

To install DeepEquilibriumNetworks.jl, use the Julia package manager:

using Pkg
+Pkg.add("DeepEquilibriumNetworks")

Quick-start

using DeepEquilibriumNetworks, Lux, Random, NonlinearSolve, Zygote, SciMLSensitivity
+using LuxCUDA  # For NVIDIA GPU support
+
+seed = 0
+rng = Random.default_rng()
+Random.seed!(rng, seed)
+
+model = Chain(Dense(2 => 2),
+    DeepEquilibriumNetwork(
+        Parallel(+, Dense(2 => 2; use_bias=false), Dense(2 => 2; use_bias=false)),
+        NewtonRaphson()))
+
+gdev = gpu_device()
+cdev = cpu_device()
+
+ps, st = Lux.setup(rng, model) |> gdev
+x = rand(rng, Float32, 2, 3) |> gdev
+y = rand(rng, Float32, 2, 3) |> gdev
+
+res, st_ = model(x, ps, st)
+st_.layer_2.solution
DeepEquilibriumSolution
+ * Initial Guess: Float32[0.0 0.0 0.0; 0.0 0.0 0.0]
+ * Steady State: Float32[0.306042 0.138591 0.0219008; 0.359832 0.201422 0.055134]
+ * Residual: Float32[-5.96046f-8 1.49012f-8 0.0; -2.98023f-8 -2.98023f-8 -3.72529f-9]
+ * Jacobian Loss: 0.0
+ * NFE: 3
gs = only(Zygote.gradient(p -> sum(abs2, first(model(x, p, st)) .- y), ps))
(layer_1 = (weight = Float32[0.40351427 0.11866814; 0.70905536 0.36941165], bias = Float32[0.78194475; 1.2905545;;]), layer_2 = (model = (layer_1 = (weight = Float32[-0.2089918 -0.31456128; -0.096208826 -0.12642977],), layer_2 = (weight = Float32[0.5448454 0.7063994; 0.2592815 0.28936744],)), init = nothing))

Citation

If you are using this project for research or other academic purposes, consider citing our paper:

@article{pal2022continuous,
+  title={Continuous Deep Equilibrium Models: Training Neural ODEs Faster by Integrating Them to Infinity},
+  author={Pal, Avik and Edelman, Alan and Rackauckas, Christopher},
+  booktitle={2023 IEEE High Performance Extreme Computing Conference (HPEC)}, 
+  year={2023}
+}

For specific algorithms, check the respective documentations and cite the corresponding papers.

Contributing

Reproducibility

The documentation of this SciML package was built using these direct dependencies,
Status `/var/lib/buildkite-agent/builds/gpuci-1/julialang/deepequilibriumnetworks/docs/Project.toml`
+  [6748aba7] DeepEquilibriumNetworks v2.1.2 `/var/lib/buildkite-agent/builds/gpuci-1/julialang/deepequilibriumnetworks`
+  [e30172f5] Documenter v1.4.1
+  [daee34ce] DocumenterCitations v1.3.3
+  [7ed4a6bd] LinearSolve v2.30.1
+  [b2108857] Lux v0.5.57
+  [d0bbae9a] LuxCUDA v0.3.2
+  [cc2ba9b6] MLDataUtils v0.5.4
+  [eb30cadb] MLDatasets v0.7.14
+  [8913a72c] NonlinearSolve v3.13.0
+  [3bd65402] Optimisers v0.3.3
+  [1dea7af3] OrdinaryDiffEq v6.84.0
+  [1ed8b502] SciMLSensitivity v7.61.1
+  [e88e6eb3] Zygote v0.6.70
+  [ade2ca70] Dates
+  [de0858da] Printf
+  [9a3f8284] Random
+  [10745b16] Statistics v1.10.0
and using this machine and Julia version.
Julia Version 1.10.4
+Commit 48d4fd48430 (2024-06-04 10:41 UTC)
+Build Info:
+  Official https://julialang.org/ release
+Platform Info:
+  OS: Linux (x86_64-linux-gnu)
+  CPU: 48 × AMD EPYC 7402 24-Core Processor
+  WORD_SIZE: 64
+  LIBM: libopenlibm
+  LLVM: libLLVM-15.0.7 (ORCJIT, znver2)
+Threads: 3 default, 0 interactive, 1 GC (on 2 virtual cores)
+Environment:
+  JULIA_CPU_THREADS = 2
+  JULIA_DEBUG = Documenter
+  JULIA_DEPOT_PATH = /root/.cache/julia-buildkite-plugin/depots/018c7dba-9a5f-4ad5-a288-1442edf3444d
+  LD_LIBRARY_PATH = /usr/local/nvidia/lib:/usr/local/nvidia/lib64
A more complete overview of all dependencies and their versions is also provided.
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You can also download the manifest file and the project file.

diff --git a/v2.1.2/objects.inv b/v2.1.2/objects.inv new file mode 100644 index 00000000..32b93b36 Binary files /dev/null and b/v2.1.2/objects.inv differ diff --git a/v2.1.2/references/index.html b/v2.1.2/references/index.html new file mode 100644 index 00000000..8a4ad6e3 --- /dev/null +++ b/v2.1.2/references/index.html @@ -0,0 +1,2 @@ + +References · Deep Equilibrium Networks

References

  • Bai, S.; Kolter, J. Z. and Koltun, V. (2019). Deep Equilibrium Models, arXiv:1909.01377 [cs, stat]. Accessed on Sep 13, 2021, arXiv: 1909.01377.
  • Bai, S.; Koltun, V. and Kolter, J. Z. (2020). Multiscale Deep Equilibrium Models, arXiv:2006.08656 [cs, stat]. Accessed on Sep 14, 2021, arXiv: 2006.08656.
  • Pal, A.; Edelman, A. and Rackauckas, C. (2022). Mixing implicit and explicit deep learning with skip DEQs and infinite time neural odes (continuous DEQs). Training 4, 5.
diff --git a/v2.1.2/search_index.js b/v2.1.2/search_index.js new file mode 100644 index 00000000..d211f743 --- /dev/null +++ b/v2.1.2/search_index.js @@ -0,0 +1,3 @@ +var documenterSearchIndex = {"docs": +[{"location":"references/#References","page":"References","title":"References","text":"","category":"section"},{"location":"references/","page":"References","title":"References","text":"Bai, S.; Kolter, J. Z. and Koltun, V. (2019). Deep Equilibrium Models, arXiv:1909.01377 [cs, stat]. Accessed on Sep 13, 2021, arXiv: 1909.01377.\n\n\n\nBai, S.; Koltun, V. and Kolter, J. Z. (2020). Multiscale Deep Equilibrium Models, arXiv:2006.08656 [cs, stat]. Accessed on Sep 14, 2021, arXiv: 2006.08656.\n\n\n\nPal, A.; Edelman, A. and Rackauckas, C. (2022). Mixing implicit and explicit deep learning with skip DEQs and infinite time neural odes (continuous DEQs). Training 4, 5.\n\n\n\n","category":"page"},{"location":"api/#Deep-Equilibrium-Models","page":"API References","title":"Deep Equilibrium Models","text":"","category":"section"},{"location":"api/","page":"API References","title":"API References","text":"(Bai et al., 2019) introduced Discrete Deep Equilibrium Models which drives a Discrete Dynamical System to its steady-state. (Pal et al., 2022) extends this framework to Continuous Dynamical Systems which converge to the steady-stable in a more stable fashion. For a detailed discussion refer to (Pal et al., 2022).","category":"page"},{"location":"api/","page":"API References","title":"API References","text":"To construct a continuous DEQ, any ODE solver compatible with DifferentialEquations.jl API can be passed as the solver. To construct a discrete DEQ, any root finding algorithm compatible with NonlinearSolve.jl API can be passed as the solver.","category":"page"},{"location":"api/#Choosing-a-Solver","page":"API References","title":"Choosing a Solver","text":"","category":"section"},{"location":"api/#Root-Finding-Algorithms","page":"API References","title":"Root Finding Algorithms","text":"","category":"section"},{"location":"api/","page":"API References","title":"API References","text":"Using Root Finding Algorithms give fast convergence when possible, but these methods also tend to be unstable. If you must use a root finding algorithm, we recommend using:","category":"page"},{"location":"api/","page":"API References","title":"API References","text":"NewtonRaphson or TrustRegion for small models\nLimitedMemoryBroyden for large Deep Learning applications (with well-conditioned Jacobians)\nNewtonRaphson(; linsolve = KrylovJL_GMRES()) for cases when Broyden methods fail","category":"page"},{"location":"api/","page":"API References","title":"API References","text":"Note that Krylov Methods rely on efficient VJPs which are not available for all Lux models. If you think this is causing a performance regression, please open an issue in Lux.jl.","category":"page"},{"location":"api/#ODE-Solvers","page":"API References","title":"ODE Solvers","text":"","category":"section"},{"location":"api/","page":"API References","title":"API References","text":"Using ODE Solvers give slower convergence, but are more stable. We generally recommend these methods over root finding algorithms. If you use implicit ODE solvers, remember to use Krylov linear solvers, see OrdinaryDiffEq.jl documentation for these. For most cases, we recommend:","category":"page"},{"location":"api/","page":"API References","title":"API References","text":"VCAB3() for high tolerance problems\nTsit5() for high tolerance problems where VCAB3() fails\nIn all other cases, follow the recommendation given in OrdinaryDiffEq.jl documentation","category":"page"},{"location":"api/#Sensitivity-Analysis","page":"API References","title":"Sensitivity Analysis","text":"","category":"section"},{"location":"api/","page":"API References","title":"API References","text":"For MultiScaleNeuralODE, we default to GaussAdjoint(; autojacvec = ZygoteVJP()). A faster alternative would be BacksolveAdjoint(; autojacvec = ZygoteVJP()) but there are stability concerns for using that. Follow the recommendation given in SciMLSensitivity.jl documentation.\nFor Steady State Problems, we default to SteadyStateAdjoint(; linsolve = SimpleGMRES(; blocksize, linsolve_kwargs = (; maxiters=10, abstol=1e-3, reltol=1e-3))). This default will perform poorly on small models. It is recommended to pass sensealg = SteadyStateAdjoint() or sensealg = SteadyStateAdjoint(; linsolve = LUFactorization()) for small models.","category":"page"},{"location":"api/#Standard-Models","page":"API References","title":"Standard Models","text":"","category":"section"},{"location":"api/","page":"API References","title":"API References","text":"DeepEquilibriumNetwork\nSkipDeepEquilibriumNetwork","category":"page"},{"location":"api/#DeepEquilibriumNetworks.DeepEquilibriumNetwork","page":"API References","title":"DeepEquilibriumNetworks.DeepEquilibriumNetwork","text":"DeepEquilibriumNetwork(model, solver; init = missing, jacobian_regularization=nothing,\n problem_type::Type{pType}=SteadyStateProblem{false}, kwargs...)\n\nDeep Equilibrium Network as proposed in (Bai et al., 2019) and (Pal et al., 2022).\n\nArguments\n\nmodel: Neural Network.\nsolver: Solver for the rootfinding problem. ODE Solvers and Nonlinear Solvers are both supported.\n\nKeyword Arguments\n\ninit: Initial Condition for the rootfinding problem. If nothing, the initial condition is set to zero(x). If missing, the initial condition is set to WrappedFunction{:direct_call}(zero). In other cases the initial condition is set to init(x, ps, st).\njacobian_regularization: Must be one of nothing, AutoForwardDiff, AutoFiniteDiff or AutoZygote.\nproblem_type: Provides a way to simulate a Vanilla Neural ODE by setting the problem_type to ODEProblem. By default, the problem type is set to SteadyStateProblem.\nkwargs: Additional Parameters that are directly passed to SciMLBase.solve.\n\nExample\n\njulia> model = DeepEquilibriumNetwork(\n Parallel(+, Dense(2, 2; use_bias=false), Dense(2, 2; use_bias=false)),\n VCABM3(); verbose=false)\nDeepEquilibriumNetwork(\n model = Parallel(\n +\n layer_1 = Dense(2 => 2, bias=false), # 4 parameters\n layer_2 = Dense(2 => 2, bias=false), # 4 parameters\n ),\n init = WrappedFunction(Base.Fix1{typeof(DeepEquilibriumNetworks.__zeros_init), Nothing}(DeepEquilibriumNetworks.__zeros_init, nothing)),\n) # Total: 8 parameters,\n # plus 0 states.\n\njulia> rng = Xoshiro(0);\n\njulia> ps, st = Lux.setup(rng, model);\n\njulia> size(first(model(ones(Float32, 2, 1), ps, st)))\n(2, 1)\n\nSee also: SkipDeepEquilibriumNetwork, MultiScaleDeepEquilibriumNetwork, MultiScaleSkipDeepEquilibriumNetwork.\n\n\n\n\n\n","category":"type"},{"location":"api/#DeepEquilibriumNetworks.SkipDeepEquilibriumNetwork","page":"API References","title":"DeepEquilibriumNetworks.SkipDeepEquilibriumNetwork","text":"SkipDeepEquilibriumNetwork(model, [init=nothing,] solver; kwargs...)\n\nSkip Deep Equilibrium Network as proposed in (Pal et al., 2022). Alias which creates a DeepEquilibriumNetwork with init kwarg set to passed value.\n\n\n\n\n\n","category":"function"},{"location":"api/#MultiScale-Models","page":"API References","title":"MultiScale Models","text":"","category":"section"},{"location":"api/","page":"API References","title":"API References","text":"MultiScaleDeepEquilibriumNetwork\nMultiScaleSkipDeepEquilibriumNetwork\nMultiScaleNeuralODE","category":"page"},{"location":"api/#DeepEquilibriumNetworks.MultiScaleDeepEquilibriumNetwork","page":"API References","title":"DeepEquilibriumNetworks.MultiScaleDeepEquilibriumNetwork","text":"MultiScaleDeepEquilibriumNetwork(main_layers::Tuple, mapping_layers::Matrix,\n post_fuse_layer::Union{Nothing, Tuple}, solver,\n scales::NTuple{N, NTuple{L, Int64}}; kwargs...)\n\nMulti Scale Deep Equilibrium Network as proposed in (Bai et al., 2020).\n\nArguments\n\nmain_layers: Tuple of Neural Networks. Each Neural Network is applied to the corresponding scale.\nmapping_layers: Matrix of Neural Networks. Each Neural Network is applied to the corresponding scale and the corresponding layer.\npost_fuse_layer: Neural Network applied to the fused output of the main layers.\nsolver: Solver for the rootfinding problem. ODE Solvers and Nonlinear Solvers are both supported.\nscales: Scales of the Multi Scale DEQ. Each scale is a tuple of integers. The length of the tuple is the number of layers in the corresponding main layer.\n\nFor keyword arguments, see DeepEquilibriumNetwork.\n\nExample\n\njulia> main_layers = (\n Parallel(+, Dense(4 => 4, tanh; use_bias=false), Dense(4 => 4, tanh; use_bias=false)),\n Dense(3 => 3, tanh), Dense(2 => 2, tanh), Dense(1 => 1, tanh));\n\njulia> mapping_layers = [NoOpLayer() Dense(4 => 3, tanh) Dense(4 => 2, tanh) Dense(4 => 1, tanh);\n Dense(3 => 4, tanh) NoOpLayer() Dense(3 => 2, tanh) Dense(3 => 1, tanh);\n Dense(2 => 4, tanh) Dense(2 => 3, tanh) NoOpLayer() Dense(2 => 1, tanh);\n Dense(1 => 4, tanh) Dense(1 => 3, tanh) Dense(1 => 2, tanh) NoOpLayer()];\n\njulia> model = MultiScaleDeepEquilibriumNetwork(\n main_layers, mapping_layers, nothing, NewtonRaphson(), ((4,), (3,), (2,), (1,)));\n\njulia> rng = Xoshiro(0);\n\njulia> ps, st = Lux.setup(rng, model);\n\njulia> x = rand(rng, Float32, 4, 12);\n\njulia> size.(first(model(x, ps, st)))\n((4, 12), (3, 12), (2, 12), (1, 12))\n\n\n\n\n\n","category":"function"},{"location":"api/#DeepEquilibriumNetworks.MultiScaleSkipDeepEquilibriumNetwork","page":"API References","title":"DeepEquilibriumNetworks.MultiScaleSkipDeepEquilibriumNetwork","text":"MultiScaleSkipDeepEquilibriumNetwork(main_layers::Tuple, mapping_layers::Matrix,\n post_fuse_layer::Union{Nothing, Tuple}, [init = nothing,] solver,\n scales::NTuple{N, NTuple{L, Int64}}; kwargs...)\n\nSkip Multi Scale Deep Equilibrium Network as proposed in (Pal et al., 2022). Alias which creates a MultiScaleDeepEquilibriumNetwork with init kwarg set to passed value.\n\nIf init is not passed, it creates a MultiScale Regularized Deep Equilibrium Network.\n\n\n\n\n\n","category":"function"},{"location":"api/#DeepEquilibriumNetworks.MultiScaleNeuralODE","page":"API References","title":"DeepEquilibriumNetworks.MultiScaleNeuralODE","text":"MultiScaleNeuralODE(args...; kwargs...)\n\nSame arguments as MultiScaleDeepEquilibriumNetwork but sets problem_type to ODEProblem{false}.\n\n\n\n\n\n","category":"function"},{"location":"api/#Solution","page":"API References","title":"Solution","text":"","category":"section"},{"location":"api/","page":"API References","title":"API References","text":"DeepEquilibriumSolution","category":"page"},{"location":"api/#DeepEquilibriumNetworks.DeepEquilibriumSolution","page":"API References","title":"DeepEquilibriumNetworks.DeepEquilibriumSolution","text":"DeepEquilibriumSolution(z_star, u₀, residual, jacobian_loss, nfe, solution)\n\nStores the solution of a DeepEquilibriumNetwork and its variants.\n\nFields\n\nz_star: Steady-State or the value reached due to maxiters\nu0: Initial Condition\nresidual: Difference of the z^* and f(z^* x)\njacobian_loss: Jacobian Stabilization Loss (see individual networks to see how it can be computed)\nnfe: Number of Function Evaluations\noriginal: Original Internal Solution\n\n\n\n\n\n","category":"type"},{"location":"tutorials/reduced_dim_deq/#Modelling-Equilibrium-Models-with-Reduced-State-Size","page":"Modelling Equilibrium Models with Reduced State Size","title":"Modelling Equilibrium Models with Reduced State Size","text":"","category":"section"},{"location":"tutorials/reduced_dim_deq/","page":"Modelling Equilibrium Models with Reduced State Size","title":"Modelling Equilibrium Models with Reduced State Size","text":"Sometimes we want don't want to solve a root finding problem with the full state size. This will often be faster, since the size of the root finding problem is reduced. We will use the same MNIST example as before, but this time we will use a reduced state size.","category":"page"},{"location":"tutorials/reduced_dim_deq/","page":"Modelling Equilibrium Models with Reduced State Size","title":"Modelling Equilibrium Models with Reduced State Size","text":"using DeepEquilibriumNetworks, SciMLSensitivity, Lux, NonlinearSolve, OrdinaryDiffEq,\n Statistics, Random, Optimisers, LuxCUDA, Zygote, LinearSolve, Dates, Printf\nusing MLDatasets: MNIST\nusing MLDataUtils: LabelEnc, convertlabel, stratifiedobs, batchview\n\nCUDA.allowscalar(false)\nENV[\"DATADEPS_ALWAYS_ACCEPT\"] = true\n\nconst cdev = cpu_device()\nconst gdev = gpu_device()\n\nfunction onehot(labels_raw)\n return convertlabel(LabelEnc.OneOfK, labels_raw, LabelEnc.NativeLabels(collect(0:9)))\nend\n\nfunction loadmnist(batchsize, split)\n # Load MNIST\n mnist = MNIST(; split)\n imgs, labels_raw = mnist.features, mnist.targets\n # Process images into (H,W,C,BS) batches\n x_train = Float32.(reshape(imgs, size(imgs, 1), size(imgs, 2), 1, size(imgs, 3))) |>\n gdev\n x_train = batchview(x_train, batchsize)\n # Onehot and batch the labels\n y_train = onehot(labels_raw) |> gdev\n y_train = batchview(y_train, batchsize)\n return x_train, y_train\nend\n\nx_train, y_train = loadmnist(128, :train);\nx_test, y_test = loadmnist(128, :test);","category":"page"},{"location":"tutorials/reduced_dim_deq/","page":"Modelling Equilibrium Models with Reduced State Size","title":"Modelling Equilibrium Models with Reduced State Size","text":"Now we will define the construct model function. Here we will use Dense Layers and downsample the features using the init kwarg.","category":"page"},{"location":"tutorials/reduced_dim_deq/","page":"Modelling Equilibrium Models with Reduced State Size","title":"Modelling Equilibrium Models with Reduced State Size","text":"function construct_model(solver; model_type::Symbol=:regdeq)\n down = Chain(FlattenLayer(), Dense(784 => 512, gelu))\n\n # The input layer of the DEQ\n deq_model = Chain(Parallel(+, Dense(128 => 64, tanh), # Reduced dim of `128`\n Dense(512 => 64, tanh)), # Original dim of `512`\n Dense(64 => 64, tanh), Dense(64 => 128)) # Return the reduced dim of `128`\n\n if model_type === :skipdeq\n init = Dense(512 => 128, tanh)\n elseif model_type === :regdeq\n error(\":regdeq is not supported for reduced dim models\")\n else\n # This should preferably done via `ChainRulesCore.@ignore_derivatives`. But here\n # we are only using Zygote so this is fine.\n init = WrappedFunction{:direct_call}(x -> Zygote.@ignore(fill!(\n similar(x, 128, size(x, 2)), false)))\n end\n\n deq = DeepEquilibriumNetwork(\n deq_model, solver; init, verbose=false, linsolve_kwargs=(; maxiters=10))\n\n classifier = Chain(Dense(128 => 128, gelu), Dense(128, 10))\n\n model = Chain(; down, deq, classifier)\n\n # For NVIDIA GPUs this directly generates the parameters on the GPU\n rng = Random.default_rng() |> gdev\n ps, st = Lux.setup(rng, model)\n\n # Warmup the forward and backward passes\n x = randn(rng, Float32, 28, 28, 1, 128)\n y = onehot(rand(Random.default_rng(), 0:9, 128)) |> gdev\n\n model_ = StatefulLuxLayer(model, ps, st)\n @printf \"[%s] warming up forward pass\\n\" string(now())\n logitcrossentropy(model_, x, ps, y)\n @printf \"[%s] warming up backward pass\\n\" string(now())\n Zygote.gradient(logitcrossentropy, model_, x, ps, y)\n @printf \"[%s] warmup complete\\n\" string(now())\n\n return model, ps, st\nend","category":"page"},{"location":"tutorials/reduced_dim_deq/","page":"Modelling Equilibrium Models with Reduced State Size","title":"Modelling Equilibrium Models with Reduced State Size","text":"Define some helper functions to train the model.","category":"page"},{"location":"tutorials/reduced_dim_deq/","page":"Modelling Equilibrium Models with Reduced State Size","title":"Modelling Equilibrium Models with Reduced State Size","text":"logitcrossentropy(ŷ, y) = mean(-sum(y .* logsoftmax(ŷ; dims=1); dims=1))\nfunction logitcrossentropy(model, x, ps, y)\n l1 = logitcrossentropy(model(x, ps), y)\n # Add in some regularization\n l2 = mean(abs2, model.st.deq.solution.z_star .- model.st.deq.solution.u0)\n return l1 + 0.1f0 * l2\nend\n\nclassify(x) = argmax.(eachcol(x))\n\nfunction accuracy(model, data, ps, st)\n total_correct, total = 0, 0\n st = Lux.testmode(st)\n model = StatefulLuxLayer(model, ps, st)\n for (x, y) in data\n target_class = classify(cdev(y))\n predicted_class = classify(cdev(model(x)))\n total_correct += sum(target_class .== predicted_class)\n total += length(target_class)\n end\n return total_correct / total\nend\n\nfunction train_model(\n solver, model_type; data_train=zip(x_train, y_train), data_test=zip(x_test, y_test))\n model, ps, st = construct_model(solver; model_type)\n model_st = StatefulLuxLayer(model, nothing, st)\n\n @printf \"[%s] Training Model: %s with Solver: %s\\n\" string(now()) model_type nameof(typeof(solver))\n\n opt_st = Optimisers.setup(Adam(0.001), ps)\n\n acc = accuracy(model, data_test, ps, st) * 100\n @printf \"[%s] Starting Accuracy: %.5f%%\\n\" string(now()) acc\n\n @printf \"[%s] Pretrain with unrolling to a depth of 5\\n\" string(now())\n st = Lux.update_state(st, :fixed_depth, Val(5))\n model_st = StatefulLuxLayer(model, ps, st)\n\n for (i, (x, y)) in enumerate(data_train)\n res = Zygote.withgradient(logitcrossentropy, model_st, x, ps, y)\n Optimisers.update!(opt_st, ps, res.grad[3])\n i % 50 == 1 &&\n @printf \"[%s] Pretraining Batch: [%4d/%4d] Loss: %.5f\\n\" string(now()) i length(data_train) res.val\n end\n\n acc = accuracy(model, data_test, ps, model_st.st) * 100\n @printf \"[%s] Pretraining complete. Accuracy: %.5f%%\\n\" string(now()) acc\n\n st = Lux.update_state(st, :fixed_depth, Val(0))\n model_st = StatefulLuxLayer(model, ps, st)\n\n for epoch in 1:3\n for (i, (x, y)) in enumerate(data_train)\n res = Zygote.withgradient(logitcrossentropy, model_st, x, ps, y)\n Optimisers.update!(opt_st, ps, res.grad[3])\n i % 50 == 1 &&\n @printf \"[%s] Epoch: [%d/%d] Batch: [%4d/%4d] Loss: %.5f\\n\" string(now()) epoch 3 i length(data_train) res.val\n end\n\n acc = accuracy(model, data_test, ps, model_st.st) * 100\n @printf \"[%s] Epoch: [%d/%d] Accuracy: %.5f%%\\n\" string(now()) epoch 3 acc\n end\n\n @printf \"[%s] Training complete.\\n\" string(now())\n\n return model, ps, st\nend","category":"page"},{"location":"tutorials/reduced_dim_deq/","page":"Modelling Equilibrium Models with Reduced State Size","title":"Modelling Equilibrium Models with Reduced State Size","text":"Now we can train our model. We can't use :regdeq here currently, but we will support this in the future.","category":"page"},{"location":"tutorials/reduced_dim_deq/","page":"Modelling Equilibrium Models with Reduced State Size","title":"Modelling Equilibrium Models with Reduced State Size","text":"train_model(NewtonRaphson(; linsolve=KrylovJL_GMRES()), :skipdeq)\nnothing # hide","category":"page"},{"location":"tutorials/reduced_dim_deq/","page":"Modelling Equilibrium Models with Reduced State Size","title":"Modelling Equilibrium Models with Reduced State Size","text":"train_model(NewtonRaphson(; linsolve=KrylovJL_GMRES()), :deq)\nnothing # hide","category":"page"},{"location":"tutorials/basic_mnist_deq/#Training-a-Simple-MNIST-Classifier-using-Deep-Equilibrium-Models","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"","category":"section"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"We will train a simple Deep Equilibrium Model on MNIST. First we load a few packages.","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"using DeepEquilibriumNetworks, SciMLSensitivity, Lux, NonlinearSolve, OrdinaryDiffEq,\n Statistics, Random, Optimisers, LuxCUDA, Zygote, LinearSolve, Dates, Printf\nusing MLDatasets: MNIST\nusing MLDataUtils: LabelEnc, convertlabel, stratifiedobs, batchview\n\nCUDA.allowscalar(false)\nENV[\"DATADEPS_ALWAYS_ACCEPT\"] = true","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"Setup device functions from Lux. See GPU Management for more details.","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"const cdev = cpu_device()\nconst gdev = gpu_device()","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"We can now construct our dataloader. We are using only limited part of the data for demonstration.","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"function onehot(labels_raw)\n return convertlabel(LabelEnc.OneOfK, labels_raw, LabelEnc.NativeLabels(collect(0:9)))\nend\n\nfunction loadmnist(batchsize, split)\n # Load MNIST\n mnist = MNIST(; split)\n imgs, labels_raw = mnist.features, mnist.targets\n # Process images into (H,W,C,BS) batches\n x_train = Float32.(reshape(imgs, size(imgs, 1), size(imgs, 2), 1, size(imgs, 3)))[\n :, :, 1:1, 1:128] |> gdev\n x_train = batchview(x_train, batchsize)\n # Onehot and batch the labels\n y_train = onehot(labels_raw)[:, 1:128] |> gdev\n y_train = batchview(y_train, batchsize)\n return x_train, y_train\nend\n\nx_train, y_train = loadmnist(16, :train);\nx_test, y_test = loadmnist(16, :test);","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"Construct the Lux Neural Network containing a DEQ layer.","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"function construct_model(solver; model_type::Symbol=:deq)\n down = Chain(Conv((3, 3), 1 => 64, gelu; stride=1), GroupNorm(64, 64),\n Conv((4, 4), 64 => 64; stride=2, pad=1))\n\n # The input layer of the DEQ\n deq_model = Chain(\n Parallel(+, Conv((3, 3), 64 => 64, tanh; stride=1, pad=SamePad()),\n Conv((3, 3), 64 => 64, tanh; stride=1, pad=SamePad())),\n Conv((3, 3), 64 => 64, tanh; stride=1, pad=SamePad()))\n\n if model_type === :skipdeq\n init = Conv((3, 3), 64 => 64, gelu; stride=1, pad=SamePad())\n elseif model_type === :regdeq\n init = nothing\n else\n init = missing\n end\n\n deq = DeepEquilibriumNetwork(\n deq_model, solver; init, verbose=false, linsolve_kwargs=(; maxiters=10))\n\n classifier = Chain(\n GroupNorm(64, 64, relu), GlobalMeanPool(), FlattenLayer(), Dense(64, 10))\n\n model = Chain(; down, deq, classifier)\n\n # For NVIDIA GPUs this directly generates the parameters on the GPU\n rng = Random.default_rng() |> gdev\n ps, st = Lux.setup(rng, model)\n\n # Warmup the forward and backward passes\n x = randn(rng, Float32, 28, 28, 1, 128)\n y = onehot(rand(Random.default_rng(), 0:9, 128)) |> gdev\n\n model_ = StatefulLuxLayer(model, ps, st)\n @printf \"[%s] warming up forward pass\\n\" string(now())\n logitcrossentropy(model_, x, ps, y)\n @printf \"[%s] warming up backward pass\\n\" string(now())\n Zygote.gradient(logitcrossentropy, model_, x, ps, y)\n @printf \"[%s] warmup complete\\n\" string(now())\n\n return model, ps, st\nend","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"Define some helper functions to train the model.","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"logitcrossentropy(ŷ, y) = mean(-sum(y .* logsoftmax(ŷ; dims=1); dims=1))\nfunction logitcrossentropy(model, x, ps, y)\n l1 = logitcrossentropy(model(x, ps), y)\n # Add in some regularization\n l2 = mean(abs2, model.st.deq.solution.z_star .- model.st.deq.solution.u0)\n return l1 + 10.0 * l2\nend\n\nclassify(x) = argmax.(eachcol(x))\n\nfunction accuracy(model, data, ps, st)\n total_correct, total = 0, 0\n st = Lux.testmode(st)\n model = StatefulLuxLayer(model, ps, st)\n for (x, y) in data\n target_class = classify(cdev(y))\n predicted_class = classify(cdev(model(x)))\n total_correct += sum(target_class .== predicted_class)\n total += length(target_class)\n end\n return total_correct / total\nend\n\nfunction train_model(\n solver, model_type; data_train=zip(x_train, y_train), data_test=zip(x_test, y_test))\n model, ps, st = construct_model(solver; model_type)\n model_st = StatefulLuxLayer(model, nothing, st)\n\n @printf \"[%s] Training Model: %s with Solver: %s\\n\" string(now()) model_type nameof(typeof(solver))\n\n opt_st = Optimisers.setup(Adam(0.001), ps)\n\n acc = accuracy(model, data_test, ps, st) * 100\n @printf \"[%s] Starting Accuracy: %.5f%%\\n\" string(now()) acc\n\n @printf \"[%s] Pretrain with unrolling to a depth of 5\\n\" string(now())\n st = Lux.update_state(st, :fixed_depth, Val(5))\n model_st = StatefulLuxLayer(model, ps, st)\n\n for (i, (x, y)) in enumerate(data_train)\n res = Zygote.withgradient(logitcrossentropy, model_st, x, ps, y)\n Optimisers.update!(opt_st, ps, res.grad[3])\n i % 50 == 1 &&\n @printf \"[%s] Pretraining Batch: [%4d/%4d] Loss: %.5f\\n\" string(now()) i length(data_train) res.val\n end\n\n acc = accuracy(model, data_test, ps, model_st.st) * 100\n @printf \"[%s] Pretraining complete. Accuracy: %.5f%%\\n\" string(now()) acc\n\n st = Lux.update_state(st, :fixed_depth, Val(0))\n model_st = StatefulLuxLayer(model, ps, st)\n\n for epoch in 1:3\n for (i, (x, y)) in enumerate(data_train)\n res = Zygote.withgradient(logitcrossentropy, model_st, x, ps, y)\n Optimisers.update!(opt_st, ps, res.grad[3])\n i % 50 == 1 &&\n @printf \"[%s] Epoch: [%d/%d] Batch: [%4d/%4d] Loss: %.5f\\n\" string(now()) epoch 3 i length(data_train) res.val\n end\n\n acc = accuracy(model, data_test, ps, model_st.st) * 100\n @printf \"[%s] Epoch: [%d/%d] Accuracy: %.5f%%\\n\" string(now()) epoch 3 acc\n end\n\n @printf \"[%s] Training complete.\\n\" string(now())\n\n return model, ps, st\nend","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"Now we can train our model. First we will train a Discrete DEQ, which effectively means pass in a root finding algorithm. Typically most packages lack good nonlinear solvers, and end up using solvers like Broyden, but we can simply slap in any of the fancy solvers from NonlinearSolve.jl. Here we will use Newton-Krylov Method:","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"train_model(NewtonRaphson(; linsolve=KrylovJL_GMRES()), :regdeq);\nnothing # hide","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"We can also train a continuous DEQ by passing in an ODE solver. Here we will use VCAB3() which tend to be quite fast for continuous Neural Network problems.","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"train_model(VCAB3(), :deq);\nnothing # hide","category":"page"},{"location":"tutorials/basic_mnist_deq/","page":"Training a Simple MNIST Classifier using Deep Equilibrium Models","title":"Training a Simple MNIST Classifier using Deep Equilibrium Models","text":"This code is setup to allow playing around with different DEQ models. Try modifying the model_type argument to train_model to :skipdeq or :deq to see how the model behaves. You can also try different solvers from NonlinearSolve.jl and OrdinaryDiffEq.jl! Even 3rd party solvers from Sundials.jl will work, just remember to use CPU for those.","category":"page"},{"location":"#DeepEquilibriumNetworks.jl","page":"Home","title":"DeepEquilibriumNetworks.jl","text":"","category":"section"},{"location":"","page":"Home","title":"Home","text":"DeepEquilibriumNetworks.jl is a framework built on top of DifferentialEquations.jl and Lux.jl, enabling the efficient training and inference for Deep Equilibrium Networks (Infinitely Deep Neural Networks).","category":"page"},{"location":"#Installation","page":"Home","title":"Installation","text":"","category":"section"},{"location":"","page":"Home","title":"Home","text":"To install DeepEquilibriumNetworks.jl, use the Julia package manager:","category":"page"},{"location":"","page":"Home","title":"Home","text":"using Pkg\nPkg.add(\"DeepEquilibriumNetworks\")","category":"page"},{"location":"#Quick-start","page":"Home","title":"Quick-start","text":"","category":"section"},{"location":"","page":"Home","title":"Home","text":"using DeepEquilibriumNetworks, Lux, Random, NonlinearSolve, Zygote, SciMLSensitivity\nusing LuxCUDA # For NVIDIA GPU support\n\nseed = 0\nrng = Random.default_rng()\nRandom.seed!(rng, seed)\n\nmodel = Chain(Dense(2 => 2),\n DeepEquilibriumNetwork(\n Parallel(+, Dense(2 => 2; use_bias=false), Dense(2 => 2; use_bias=false)),\n NewtonRaphson()))\n\ngdev = gpu_device()\ncdev = cpu_device()\n\nps, st = Lux.setup(rng, model) |> gdev\nx = rand(rng, Float32, 2, 3) |> gdev\ny = rand(rng, Float32, 2, 3) |> gdev\n\nres, st_ = model(x, ps, st)\nst_.layer_2.solution","category":"page"},{"location":"","page":"Home","title":"Home","text":"gs = only(Zygote.gradient(p -> sum(abs2, first(model(x, p, st)) .- y), ps))","category":"page"},{"location":"#Citation","page":"Home","title":"Citation","text":"","category":"section"},{"location":"","page":"Home","title":"Home","text":"If you are using this project for research or other academic purposes, consider citing our paper:","category":"page"},{"location":"","page":"Home","title":"Home","text":"@article{pal2022continuous,\n title={Continuous Deep Equilibrium Models: Training Neural ODEs Faster by Integrating Them to Infinity},\n author={Pal, Avik and Edelman, Alan and Rackauckas, Christopher},\n booktitle={2023 IEEE High Performance Extreme Computing Conference (HPEC)}, \n year={2023}\n}","category":"page"},{"location":"","page":"Home","title":"Home","text":"For specific algorithms, check the respective documentations and cite the corresponding papers.","category":"page"},{"location":"#Contributing","page":"Home","title":"Contributing","text":"","category":"section"},{"location":"","page":"Home","title":"Home","text":"Please refer to the SciML ColPrac: Contributor's Guide on Collaborative Practices for Community Packages for guidance on PRs, issues, and other matters relating to contributing to SciML.\nSee the SciML Style Guide for common coding practices and other style decisions.\nThere are a few community forums:\nThe #diffeq-bridged and #sciml-bridged channels in the Julia Slack\nThe #diffeq-bridged and #sciml-bridged channels in the Julia Zulip\nOn the Julia Discourse forums\nSee also SciML Community page","category":"page"},{"location":"#Reproducibility","page":"Home","title":"Reproducibility","text":"","category":"section"},{"location":"","page":"Home","title":"Home","text":"
The documentation of this SciML package was built using these direct dependencies,","category":"page"},{"location":"","page":"Home","title":"Home","text":"using Pkg # hide\nPkg.status() # hide","category":"page"},{"location":"","page":"Home","title":"Home","text":"
","category":"page"},{"location":"","page":"Home","title":"Home","text":"
and using this machine and Julia version.","category":"page"},{"location":"","page":"Home","title":"Home","text":"using InteractiveUtils # hide\nversioninfo() # hide","category":"page"},{"location":"","page":"Home","title":"Home","text":"
","category":"page"},{"location":"","page":"Home","title":"Home","text":"
A more complete overview of all dependencies and their versions is also provided.","category":"page"},{"location":"","page":"Home","title":"Home","text":"using Pkg # hide\nPkg.status(; mode=PKGMODE_MANIFEST) # hide","category":"page"},{"location":"","page":"Home","title":"Home","text":"
","category":"page"},{"location":"","page":"Home","title":"Home","text":"using TOML\nusing Markdown\nversion = TOML.parse(read(\"../../Project.toml\", String))[\"version\"]\nname = TOML.parse(read(\"../../Project.toml\", String))[\"name\"]\nlink_manifest = \"https://github.com/SciML/\" *\n name *\n \".jl/tree/gh-pages/v\" *\n version *\n \"/assets/Manifest.toml\"\nlink_project = \"https://github.com/SciML/\" *\n name *\n \".jl/tree/gh-pages/v\" *\n version *\n \"/assets/Project.toml\"\nMarkdown.parse(\"\"\"You can also download the\n[manifest]($link_manifest)\nfile and the\n[project]($link_project)\nfile.\n\"\"\")","category":"page"}] +} diff --git a/v2.1.2/siteinfo.js b/v2.1.2/siteinfo.js new file mode 100644 index 00000000..16c15ac9 --- /dev/null +++ b/v2.1.2/siteinfo.js @@ -0,0 +1 @@ +var DOCUMENTER_CURRENT_VERSION = "v2.1.2"; diff --git a/v2.1.2/tutorials/basic_mnist_deq/index.html b/v2.1.2/tutorials/basic_mnist_deq/index.html new file mode 100644 index 00000000..732dc0e1 --- /dev/null +++ b/v2.1.2/tutorials/basic_mnist_deq/index.html @@ -0,0 +1,165 @@ + +Training a Simple MNIST Classifier using Deep Equilibrium Models · Deep Equilibrium Networks

Training a Simple MNIST Classifier using Deep Equilibrium Models

We will train a simple Deep Equilibrium Model on MNIST. First we load a few packages.

using DeepEquilibriumNetworks, SciMLSensitivity, Lux, NonlinearSolve, OrdinaryDiffEq,
+      Statistics, Random, Optimisers, LuxCUDA, Zygote, LinearSolve, Dates, Printf
+using MLDatasets: MNIST
+using MLDataUtils: LabelEnc, convertlabel, stratifiedobs, batchview
+
+CUDA.allowscalar(false)
+ENV["DATADEPS_ALWAYS_ACCEPT"] = true
true

Setup device functions from Lux. See GPU Management for more details.

const cdev = cpu_device()
+const gdev = gpu_device()
(::LuxDeviceUtils.LuxCUDADevice{Nothing}) (generic function with 5 methods)

We can now construct our dataloader. We are using only limited part of the data for demonstration.

function onehot(labels_raw)
+    return convertlabel(LabelEnc.OneOfK, labels_raw, LabelEnc.NativeLabels(collect(0:9)))
+end
+
+function loadmnist(batchsize, split)
+    # Load MNIST
+    mnist = MNIST(; split)
+    imgs, labels_raw = mnist.features, mnist.targets
+    # Process images into (H,W,C,BS) batches
+    x_train = Float32.(reshape(imgs, size(imgs, 1), size(imgs, 2), 1, size(imgs, 3)))[
+        :, :, 1:1, 1:128] |> gdev
+    x_train = batchview(x_train, batchsize)
+    # Onehot and batch the labels
+    y_train = onehot(labels_raw)[:, 1:128] |> gdev
+    y_train = batchview(y_train, batchsize)
+    return x_train, y_train
+end
+
+x_train, y_train = loadmnist(16, :train);
+x_test, y_test = loadmnist(16, :test);
(CUDA.CuArray{Float32, 4, CUDA.DeviceMemory}[[0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0], [0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0], [0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0], [0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0], [0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0], [0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0], [0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0], [0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0]], CUDA.CuArray{Int64, 2, CUDA.DeviceMemory}[[0 0 … 0 0; 0 0 … 1 0; … ; 0 0 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 0 0 … 0 1; … ; 0 0 … 0 0; 1 0 … 0 0], [0 0 … 0 0; 0 0 … 1 0; … ; 0 0 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 0 0 … 0 0; … ; 0 0 … 0 0; 0 0 … 1 0], [0 0 … 0 0; 0 0 … 0 0; … ; 0 0 … 0 0; 0 0 … 1 0], [0 0 … 0 0; 0 0 … 1 0; … ; 0 0 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 1 0 … 0 0; … ; 0 0 … 1 0; 0 0 … 0 0], [0 0 … 1 0; 0 0 … 0 0; … ; 0 0 … 0 0; 0 1 … 0 0]])

Construct the Lux Neural Network containing a DEQ layer.

function construct_model(solver; model_type::Symbol=:deq)
+    down = Chain(Conv((3, 3), 1 => 64, gelu; stride=1), GroupNorm(64, 64),
+        Conv((4, 4), 64 => 64; stride=2, pad=1))
+
+    # The input layer of the DEQ
+    deq_model = Chain(
+        Parallel(+, Conv((3, 3), 64 => 64, tanh; stride=1, pad=SamePad()),
+            Conv((3, 3), 64 => 64, tanh; stride=1, pad=SamePad())),
+        Conv((3, 3), 64 => 64, tanh; stride=1, pad=SamePad()))
+
+    if model_type === :skipdeq
+        init = Conv((3, 3), 64 => 64, gelu; stride=1, pad=SamePad())
+    elseif model_type === :regdeq
+        init = nothing
+    else
+        init = missing
+    end
+
+    deq = DeepEquilibriumNetwork(
+        deq_model, solver; init, verbose=false, linsolve_kwargs=(; maxiters=10))
+
+    classifier = Chain(
+        GroupNorm(64, 64, relu), GlobalMeanPool(), FlattenLayer(), Dense(64, 10))
+
+    model = Chain(; down, deq, classifier)
+
+    # For NVIDIA GPUs this directly generates the parameters on the GPU
+    rng = Random.default_rng() |> gdev
+    ps, st = Lux.setup(rng, model)
+
+    # Warmup the forward and backward passes
+    x = randn(rng, Float32, 28, 28, 1, 128)
+    y = onehot(rand(Random.default_rng(), 0:9, 128)) |> gdev
+
+    model_ = StatefulLuxLayer(model, ps, st)
+    @printf "[%s] warming up forward pass\n" string(now())
+    logitcrossentropy(model_, x, ps, y)
+    @printf "[%s] warming up backward pass\n" string(now())
+    Zygote.gradient(logitcrossentropy, model_, x, ps, y)
+    @printf "[%s] warmup complete\n" string(now())
+
+    return model, ps, st
+end
construct_model (generic function with 1 method)

Define some helper functions to train the model.

logitcrossentropy(ŷ, y) = mean(-sum(y .* logsoftmax(ŷ; dims=1); dims=1))
+function logitcrossentropy(model, x, ps, y)
+    l1 = logitcrossentropy(model(x, ps), y)
+    # Add in some regularization
+    l2 = mean(abs2, model.st.deq.solution.z_star .- model.st.deq.solution.u0)
+    return l1 + 10.0 * l2
+end
+
+classify(x) = argmax.(eachcol(x))
+
+function accuracy(model, data, ps, st)
+    total_correct, total = 0, 0
+    st = Lux.testmode(st)
+    model = StatefulLuxLayer(model, ps, st)
+    for (x, y) in data
+        target_class = classify(cdev(y))
+        predicted_class = classify(cdev(model(x)))
+        total_correct += sum(target_class .== predicted_class)
+        total += length(target_class)
+    end
+    return total_correct / total
+end
+
+function train_model(
+        solver, model_type; data_train=zip(x_train, y_train), data_test=zip(x_test, y_test))
+    model, ps, st = construct_model(solver; model_type)
+    model_st = StatefulLuxLayer(model, nothing, st)
+
+    @printf "[%s] Training Model: %s with Solver: %s\n" string(now()) model_type nameof(typeof(solver))
+
+    opt_st = Optimisers.setup(Adam(0.001), ps)
+
+    acc = accuracy(model, data_test, ps, st) * 100
+    @printf "[%s] Starting Accuracy: %.5f%%\n" string(now()) acc
+
+    @printf "[%s] Pretrain with unrolling to a depth of 5\n" string(now())
+    st = Lux.update_state(st, :fixed_depth, Val(5))
+    model_st = StatefulLuxLayer(model, ps, st)
+
+    for (i, (x, y)) in enumerate(data_train)
+        res = Zygote.withgradient(logitcrossentropy, model_st, x, ps, y)
+        Optimisers.update!(opt_st, ps, res.grad[3])
+        i % 50 == 1 &&
+            @printf "[%s] Pretraining Batch: [%4d/%4d] Loss: %.5f\n" string(now()) i length(data_train) res.val
+    end
+
+    acc = accuracy(model, data_test, ps, model_st.st) * 100
+    @printf "[%s] Pretraining complete. Accuracy: %.5f%%\n" string(now()) acc
+
+    st = Lux.update_state(st, :fixed_depth, Val(0))
+    model_st = StatefulLuxLayer(model, ps, st)
+
+    for epoch in 1:3
+        for (i, (x, y)) in enumerate(data_train)
+            res = Zygote.withgradient(logitcrossentropy, model_st, x, ps, y)
+            Optimisers.update!(opt_st, ps, res.grad[3])
+            i % 50 == 1 &&
+                @printf "[%s] Epoch: [%d/%d] Batch: [%4d/%4d] Loss: %.5f\n" string(now()) epoch 3 i length(data_train) res.val
+        end
+
+        acc = accuracy(model, data_test, ps, model_st.st) * 100
+        @printf "[%s] Epoch: [%d/%d] Accuracy: %.5f%%\n" string(now()) epoch 3 acc
+    end
+
+    @printf "[%s] Training complete.\n" string(now())
+
+    return model, ps, st
+end
train_model (generic function with 1 method)

Now we can train our model. First we will train a Discrete DEQ, which effectively means pass in a root finding algorithm. Typically most packages lack good nonlinear solvers, and end up using solvers like Broyden, but we can simply slap in any of the fancy solvers from NonlinearSolve.jl. Here we will use Newton-Krylov Method:

train_model(NewtonRaphson(; linsolve=KrylovJL_GMRES()), :regdeq);
[2024-06-24T05:05:57.122] warming up forward pass
+[2024-06-24T05:06:30.314] warming up backward pass
+[2024-06-24T05:07:45.324] warmup complete
+[2024-06-24T05:07:45.363] Training Model: regdeq with Solver: GeneralizedFirstOrderAlgorithm
+[2024-06-24T05:07:48.633] Starting Accuracy: 7.81250%
+[2024-06-24T05:07:48.867] Pretrain with unrolling to a depth of 5
+[2024-06-24T05:08:28.699] Pretraining Batch: [   1/   8] Loss: 3.11110
+[2024-06-24T05:08:29.601] Pretraining complete. Accuracy: 7.81250%
+[2024-06-24T05:08:29.898] Epoch: [1/3] Batch: [   1/   8] Loss: 3.38458
+[2024-06-24T05:08:31.792] Epoch: [1/3] Accuracy: 7.81250%
+[2024-06-24T05:08:31.882] Epoch: [2/3] Batch: [   1/   8] Loss: 3.35962
+[2024-06-24T05:08:32.974] Epoch: [2/3] Accuracy: 8.59375%
+[2024-06-24T05:08:33.047] Epoch: [3/3] Batch: [   1/   8] Loss: 3.46500
+[2024-06-24T05:08:35.111] Epoch: [3/3] Accuracy: 28.90625%
+[2024-06-24T05:08:35.111] Training complete.

We can also train a continuous DEQ by passing in an ODE solver. Here we will use VCAB3() which tend to be quite fast for continuous Neural Network problems.

train_model(VCAB3(), :deq);
[2024-06-24T05:08:35.614] warming up forward pass
+[2024-06-24T05:08:49.114] warming up backward pass
+[2024-06-24T05:09:06.654] warmup complete
+[2024-06-24T05:09:06.691] Training Model: deq with Solver: VCAB3
+[2024-06-24T05:09:07.279] Starting Accuracy: 9.37500%
+[2024-06-24T05:09:07.279] Pretrain with unrolling to a depth of 5
+[2024-06-24T05:09:35.270] Pretraining Batch: [   1/   8] Loss: 4.34183
+[2024-06-24T05:09:35.594] Pretraining complete. Accuracy: 9.37500%
+[2024-06-24T05:09:35.686] Epoch: [1/3] Batch: [   1/   8] Loss: 5.60964
+[2024-06-24T05:09:36.513] Epoch: [1/3] Accuracy: 9.37500%
+[2024-06-24T05:09:36.567] Epoch: [2/3] Batch: [   1/   8] Loss: 6.17645
+[2024-06-24T05:09:37.368] Epoch: [2/3] Accuracy: 19.53125%
+[2024-06-24T05:09:37.423] Epoch: [3/3] Batch: [   1/   8] Loss: 6.57674
+[2024-06-24T05:09:38.236] Epoch: [3/3] Accuracy: 19.53125%
+[2024-06-24T05:09:38.236] Training complete.

This code is setup to allow playing around with different DEQ models. Try modifying the model_type argument to train_model to :skipdeq or :deq to see how the model behaves. You can also try different solvers from NonlinearSolve.jl and OrdinaryDiffEq.jl! Even 3rd party solvers from Sundials.jl will work, just remember to use CPU for those.

diff --git a/v2.1.2/tutorials/reduced_dim_deq/index.html b/v2.1.2/tutorials/reduced_dim_deq/index.html new file mode 100644 index 00000000..bc73c5cb --- /dev/null +++ b/v2.1.2/tutorials/reduced_dim_deq/index.html @@ -0,0 +1,241 @@ + +Modelling Equilibrium Models with Reduced State Size · Deep Equilibrium Networks

Modelling Equilibrium Models with Reduced State Size

Sometimes we want don't want to solve a root finding problem with the full state size. This will often be faster, since the size of the root finding problem is reduced. We will use the same MNIST example as before, but this time we will use a reduced state size.

using DeepEquilibriumNetworks, SciMLSensitivity, Lux, NonlinearSolve, OrdinaryDiffEq,
+      Statistics, Random, Optimisers, LuxCUDA, Zygote, LinearSolve, Dates, Printf
+using MLDatasets: MNIST
+using MLDataUtils: LabelEnc, convertlabel, stratifiedobs, batchview
+
+CUDA.allowscalar(false)
+ENV["DATADEPS_ALWAYS_ACCEPT"] = true
+
+const cdev = cpu_device()
+const gdev = gpu_device()
+
+function onehot(labels_raw)
+    return convertlabel(LabelEnc.OneOfK, labels_raw, LabelEnc.NativeLabels(collect(0:9)))
+end
+
+function loadmnist(batchsize, split)
+    # Load MNIST
+    mnist = MNIST(; split)
+    imgs, labels_raw = mnist.features, mnist.targets
+    # Process images into (H,W,C,BS) batches
+    x_train = Float32.(reshape(imgs, size(imgs, 1), size(imgs, 2), 1, size(imgs, 3))) |>
+              gdev
+    x_train = batchview(x_train, batchsize)
+    # Onehot and batch the labels
+    y_train = onehot(labels_raw) |> gdev
+    y_train = batchview(y_train, batchsize)
+    return x_train, y_train
+end
+
+x_train, y_train = loadmnist(128, :train);
+x_test, y_test = loadmnist(128, :test);
(CUDA.CuArray{Float32, 4, CUDA.DeviceMemory}[[0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0], [0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0], [0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0], [0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; … ;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; … ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0;;;; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0; 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… ; 0.0 0.0 … 0.0 0.0; 0.0 0.0 … 0.0 0.0]], CUDA.CuArray{Int64, 2, CUDA.DeviceMemory}[[0 0 … 1 0; 0 0 … 0 0; … ; 0 0 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 0 0 … 0 0; … ; 1 0 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 0 0 … 0 0; … ; 0 1 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 0 1 … 0 0; … ; 0 0 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 0 0 … 0 0; … ; 0 0 … 0 0; 0 0 … 0 1], [0 0 … 0 0; 1 0 … 0 1; … ; 0 1 … 0 0; 0 0 … 0 0], [0 0 … 0 1; 1 0 … 0 0; … ; 0 0 … 0 0; 0 0 … 0 0], [1 0 … 0 0; 0 0 … 0 0; … ; 0 0 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 0 1 … 0 0; … ; 0 0 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 0 0 … 0 0; … ; 0 0 … 0 0; 1 0 … 0 0]  …  [0 0 … 0 0; 0 0 … 0 0; … ; 0 0 … 0 0; 0 1 … 0 0], [0 0 … 0 0; 0 0 … 0 0; … ; 0 0 … 1 0; 0 0 … 0 0], [0 0 … 0 0; 0 0 … 0 0; … ; 0 0 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 0 0 … 0 0; … ; 1 0 … 0 0; 0 1 … 1 0], [0 0 … 0 0; 0 0 … 0 0; … ; 0 0 … 0 0; 1 0 … 0 0], [0 0 … 0 0; 0 1 … 0 0; … ; 0 0 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 0 0 … 0 1; … ; 0 0 … 0 0; 1 0 … 0 0], [0 1 … 0 0; 0 0 … 0 0; … ; 0 0 … 0 0; 0 0 … 0 0], [0 0 … 0 0; 0 0 … 0 0; … ; 0 0 … 1 0; 0 0 … 0 0], [0 0 … 0 1; 0 0 … 0 0; … ; 0 1 … 0 0; 1 0 … 0 0]])

Now we will define the construct model function. Here we will use Dense Layers and downsample the features using the init kwarg.

function construct_model(solver; model_type::Symbol=:regdeq)
+    down = Chain(FlattenLayer(), Dense(784 => 512, gelu))
+
+    # The input layer of the DEQ
+    deq_model = Chain(Parallel(+, Dense(128 => 64, tanh),   # Reduced dim of `128`
+            Dense(512 => 64, tanh)),  # Original dim of `512`
+        Dense(64 => 64, tanh), Dense(64 => 128))       # Return the reduced dim of `128`
+
+    if model_type === :skipdeq
+        init = Dense(512 => 128, tanh)
+    elseif model_type === :regdeq
+        error(":regdeq is not supported for reduced dim models")
+    else
+        # This should preferably done via `ChainRulesCore.@ignore_derivatives`. But here
+        # we are only using Zygote so this is fine.
+        init = WrappedFunction{:direct_call}(x -> Zygote.@ignore(fill!(
+            similar(x, 128, size(x, 2)), false)))
+    end
+
+    deq = DeepEquilibriumNetwork(
+        deq_model, solver; init, verbose=false, linsolve_kwargs=(; maxiters=10))
+
+    classifier = Chain(Dense(128 => 128, gelu), Dense(128, 10))
+
+    model = Chain(; down, deq, classifier)
+
+    # For NVIDIA GPUs this directly generates the parameters on the GPU
+    rng = Random.default_rng() |> gdev
+    ps, st = Lux.setup(rng, model)
+
+    # Warmup the forward and backward passes
+    x = randn(rng, Float32, 28, 28, 1, 128)
+    y = onehot(rand(Random.default_rng(), 0:9, 128)) |> gdev
+
+    model_ = StatefulLuxLayer(model, ps, st)
+    @printf "[%s] warming up forward pass\n" string(now())
+    logitcrossentropy(model_, x, ps, y)
+    @printf "[%s] warming up backward pass\n" string(now())
+    Zygote.gradient(logitcrossentropy, model_, x, ps, y)
+    @printf "[%s] warmup complete\n" string(now())
+
+    return model, ps, st
+end
construct_model (generic function with 1 method)

Define some helper functions to train the model.

logitcrossentropy(ŷ, y) = mean(-sum(y .* logsoftmax(ŷ; dims=1); dims=1))
+function logitcrossentropy(model, x, ps, y)
+    l1 = logitcrossentropy(model(x, ps), y)
+    # Add in some regularization
+    l2 = mean(abs2, model.st.deq.solution.z_star .- model.st.deq.solution.u0)
+    return l1 + 0.1f0 * l2
+end
+
+classify(x) = argmax.(eachcol(x))
+
+function accuracy(model, data, ps, st)
+    total_correct, total = 0, 0
+    st = Lux.testmode(st)
+    model = StatefulLuxLayer(model, ps, st)
+    for (x, y) in data
+        target_class = classify(cdev(y))
+        predicted_class = classify(cdev(model(x)))
+        total_correct += sum(target_class .== predicted_class)
+        total += length(target_class)
+    end
+    return total_correct / total
+end
+
+function train_model(
+        solver, model_type; data_train=zip(x_train, y_train), data_test=zip(x_test, y_test))
+    model, ps, st = construct_model(solver; model_type)
+    model_st = StatefulLuxLayer(model, nothing, st)
+
+    @printf "[%s] Training Model: %s with Solver: %s\n" string(now()) model_type nameof(typeof(solver))
+
+    opt_st = Optimisers.setup(Adam(0.001), ps)
+
+    acc = accuracy(model, data_test, ps, st) * 100
+    @printf "[%s] Starting Accuracy: %.5f%%\n" string(now()) acc
+
+    @printf "[%s] Pretrain with unrolling to a depth of 5\n" string(now())
+    st = Lux.update_state(st, :fixed_depth, Val(5))
+    model_st = StatefulLuxLayer(model, ps, st)
+
+    for (i, (x, y)) in enumerate(data_train)
+        res = Zygote.withgradient(logitcrossentropy, model_st, x, ps, y)
+        Optimisers.update!(opt_st, ps, res.grad[3])
+        i % 50 == 1 &&
+            @printf "[%s] Pretraining Batch: [%4d/%4d] Loss: %.5f\n" string(now()) i length(data_train) res.val
+    end
+
+    acc = accuracy(model, data_test, ps, model_st.st) * 100
+    @printf "[%s] Pretraining complete. Accuracy: %.5f%%\n" string(now()) acc
+
+    st = Lux.update_state(st, :fixed_depth, Val(0))
+    model_st = StatefulLuxLayer(model, ps, st)
+
+    for epoch in 1:3
+        for (i, (x, y)) in enumerate(data_train)
+            res = Zygote.withgradient(logitcrossentropy, model_st, x, ps, y)
+            Optimisers.update!(opt_st, ps, res.grad[3])
+            i % 50 == 1 &&
+                @printf "[%s] Epoch: [%d/%d] Batch: [%4d/%4d] Loss: %.5f\n" string(now()) epoch 3 i length(data_train) res.val
+        end
+
+        acc = accuracy(model, data_test, ps, model_st.st) * 100
+        @printf "[%s] Epoch: [%d/%d] Accuracy: %.5f%%\n" string(now()) epoch 3 acc
+    end
+
+    @printf "[%s] Training complete.\n" string(now())
+
+    return model, ps, st
+end
train_model (generic function with 1 method)

Now we can train our model. We can't use :regdeq here currently, but we will support this in the future.

train_model(NewtonRaphson(; linsolve=KrylovJL_GMRES()), :skipdeq)
[2024-06-24T05:09:40.696] warming up forward pass
+[2024-06-24T05:09:48.655] warming up backward pass
+[2024-06-24T05:10:23.173] warmup complete
+[2024-06-24T05:10:23.193] Training Model: skipdeq with Solver: GeneralizedFirstOrderAlgorithm
+[2024-06-24T05:10:31.720] Starting Accuracy: 9.66546%
+[2024-06-24T05:10:31.720] Pretrain with unrolling to a depth of 5
+[2024-06-24T05:11:13.651] Pretraining Batch: [   1/ 468] Loss: 2.33666
+[2024-06-24T05:11:14.052] Pretraining Batch: [  51/ 468] Loss: 0.44734
+[2024-06-24T05:11:14.203] Pretraining Batch: [ 101/ 468] Loss: 0.31479
+[2024-06-24T05:11:14.357] Pretraining Batch: [ 151/ 468] Loss: 0.23121
+[2024-06-24T05:11:14.508] Pretraining Batch: [ 201/ 468] Loss: 0.34906
+[2024-06-24T05:11:14.746] Pretraining Batch: [ 251/ 468] Loss: 0.37460
+[2024-06-24T05:11:14.895] Pretraining Batch: [ 301/ 468] Loss: 0.25505
+[2024-06-24T05:11:15.043] Pretraining Batch: [ 351/ 468] Loss: 0.32193
+[2024-06-24T05:11:15.191] Pretraining Batch: [ 401/ 468] Loss: 0.40944
+[2024-06-24T05:11:15.339] Pretraining Batch: [ 451/ 468] Loss: 0.21468
+[2024-06-24T05:11:15.733] Pretraining complete. Accuracy: 96.36418%
+[2024-06-24T05:11:16.051] Epoch: [1/3] Batch: [   1/ 468] Loss: 0.38868
+[2024-06-24T05:11:19.455] Epoch: [1/3] Batch: [  51/ 468] Loss: 0.21358
+[2024-06-24T05:11:21.851] Epoch: [1/3] Batch: [ 101/ 468] Loss: 0.19272
+[2024-06-24T05:11:24.258] Epoch: [1/3] Batch: [ 151/ 468] Loss: 0.16561
+[2024-06-24T05:11:26.289] Epoch: [1/3] Batch: [ 201/ 468] Loss: 0.21025
+[2024-06-24T05:11:28.531] Epoch: [1/3] Batch: [ 251/ 468] Loss: 0.26010
+[2024-06-24T05:11:30.785] Epoch: [1/3] Batch: [ 301/ 468] Loss: 0.18984
+[2024-06-24T05:11:32.893] Epoch: [1/3] Batch: [ 351/ 468] Loss: 0.22165
+[2024-06-24T05:11:35.065] Epoch: [1/3] Batch: [ 401/ 468] Loss: 0.27168
+[2024-06-24T05:11:37.143] Epoch: [1/3] Batch: [ 451/ 468] Loss: 0.15184
+[2024-06-24T05:11:39.992] Epoch: [1/3] Accuracy: 96.45433%
+[2024-06-24T05:11:40.032] Epoch: [2/3] Batch: [   1/ 468] Loss: 0.16495
+[2024-06-24T05:11:42.106] Epoch: [2/3] Batch: [  51/ 468] Loss: 0.12660
+[2024-06-24T05:11:44.215] Epoch: [2/3] Batch: [ 101/ 468] Loss: 0.19591
+[2024-06-24T05:11:46.129] Epoch: [2/3] Batch: [ 151/ 468] Loss: 0.12977
+[2024-06-24T05:11:48.293] Epoch: [2/3] Batch: [ 201/ 468] Loss: 0.21953
+[2024-06-24T05:11:50.491] Epoch: [2/3] Batch: [ 251/ 468] Loss: 0.18357
+[2024-06-24T05:11:52.640] Epoch: [2/3] Batch: [ 301/ 468] Loss: 0.14325
+[2024-06-24T05:11:54.876] Epoch: [2/3] Batch: [ 351/ 468] Loss: 0.14788
+[2024-06-24T05:11:57.041] Epoch: [2/3] Batch: [ 401/ 468] Loss: 0.17810
+[2024-06-24T05:11:59.152] Epoch: [2/3] Batch: [ 451/ 468] Loss: 0.13660
+[2024-06-24T05:12:02.019] Epoch: [2/3] Accuracy: 97.35577%
+[2024-06-24T05:12:02.058] Epoch: [3/3] Batch: [   1/ 468] Loss: 0.15258
+[2024-06-24T05:12:04.216] Epoch: [3/3] Batch: [  51/ 468] Loss: 0.11607
+[2024-06-24T05:12:06.388] Epoch: [3/3] Batch: [ 101/ 468] Loss: 0.12143
+[2024-06-24T05:12:08.444] Epoch: [3/3] Batch: [ 151/ 468] Loss: 0.14013
+[2024-06-24T05:12:10.717] Epoch: [3/3] Batch: [ 201/ 468] Loss: 0.17987
+[2024-06-24T05:12:13.074] Epoch: [3/3] Batch: [ 251/ 468] Loss: 0.17071
+[2024-06-24T05:12:15.427] Epoch: [3/3] Batch: [ 301/ 468] Loss: 0.11980
+[2024-06-24T05:12:17.915] Epoch: [3/3] Batch: [ 351/ 468] Loss: 0.13029
+[2024-06-24T05:12:20.380] Epoch: [3/3] Batch: [ 401/ 468] Loss: 0.12719
+[2024-06-24T05:12:22.658] Epoch: [3/3] Batch: [ 451/ 468] Loss: 0.11413
+[2024-06-24T05:12:26.041] Epoch: [3/3] Accuracy: 97.20553%
+[2024-06-24T05:12:26.041] Training complete.
train_model(NewtonRaphson(; linsolve=KrylovJL_GMRES()), :deq)
[2024-06-24T05:12:26.172] warming up forward pass
+[2024-06-24T05:12:26.372] warming up backward pass
+[2024-06-24T05:12:36.437] warmup complete
+[2024-06-24T05:12:36.457] Training Model: deq with Solver: GeneralizedFirstOrderAlgorithm
+[2024-06-24T05:12:41.624] Starting Accuracy: 12.72035%
+[2024-06-24T05:12:41.624] Pretrain with unrolling to a depth of 5
+[2024-06-24T05:13:16.409] Pretraining Batch: [   1/ 468] Loss: 2.29866
+[2024-06-24T05:13:16.553] Pretraining Batch: [  51/ 468] Loss: 0.39681
+[2024-06-24T05:13:16.758] Pretraining Batch: [ 101/ 468] Loss: 0.25326
+[2024-06-24T05:13:16.898] Pretraining Batch: [ 151/ 468] Loss: 0.21839
+[2024-06-24T05:13:17.038] Pretraining Batch: [ 201/ 468] Loss: 0.26118
+[2024-06-24T05:13:17.180] Pretraining Batch: [ 251/ 468] Loss: 0.32105
+[2024-06-24T05:13:17.320] Pretraining Batch: [ 301/ 468] Loss: 0.20447
+[2024-06-24T05:13:17.460] Pretraining Batch: [ 351/ 468] Loss: 0.27525
+[2024-06-24T05:13:17.601] Pretraining Batch: [ 401/ 468] Loss: 0.32570
+[2024-06-24T05:13:17.741] Pretraining Batch: [ 451/ 468] Loss: 0.17751
+[2024-06-24T05:13:17.979] Pretraining complete. Accuracy: 96.23397%
+[2024-06-24T05:13:18.062] Epoch: [1/3] Batch: [   1/ 468] Loss: 0.18200
+[2024-06-24T05:14:21.996] Epoch: [1/3] Batch: [  51/ 468] Loss: 0.18680
+[2024-06-24T05:14:26.884] Epoch: [1/3] Batch: [ 101/ 468] Loss: 0.20987
+[2024-06-24T05:14:29.386] Epoch: [1/3] Batch: [ 151/ 468] Loss: 0.15725
+[2024-06-24T05:14:31.959] Epoch: [1/3] Batch: [ 201/ 468] Loss: 0.16380
+[2024-06-24T05:14:34.474] Epoch: [1/3] Batch: [ 251/ 468] Loss: 0.18212
+[2024-06-24T05:14:36.835] Epoch: [1/3] Batch: [ 301/ 468] Loss: 0.12722
+[2024-06-24T05:14:39.268] Epoch: [1/3] Batch: [ 351/ 468] Loss: 0.14358
+[2024-06-24T05:14:41.716] Epoch: [1/3] Batch: [ 401/ 468] Loss: 0.16006
+[2024-06-24T05:14:44.083] Epoch: [1/3] Batch: [ 451/ 468] Loss: 0.13414
+[2024-06-24T05:14:47.449] Epoch: [1/3] Accuracy: 96.84495%
+[2024-06-24T05:14:47.489] Epoch: [2/3] Batch: [   1/ 468] Loss: 0.14573
+[2024-06-24T05:14:49.530] Epoch: [2/3] Batch: [  51/ 468] Loss: 0.10062
+[2024-06-24T05:14:51.816] Epoch: [2/3] Batch: [ 101/ 468] Loss: 0.10160
+[2024-06-24T05:14:54.081] Epoch: [2/3] Batch: [ 151/ 468] Loss: 0.11378
+[2024-06-24T05:14:56.328] Epoch: [2/3] Batch: [ 201/ 468] Loss: 0.12052
+[2024-06-24T05:14:58.662] Epoch: [2/3] Batch: [ 251/ 468] Loss: 0.10753
+[2024-06-24T05:15:01.156] Epoch: [2/3] Batch: [ 301/ 468] Loss: 0.10635
+[2024-06-24T05:15:03.662] Epoch: [2/3] Batch: [ 351/ 468] Loss: 0.10162
+[2024-06-24T05:15:06.108] Epoch: [2/3] Batch: [ 401/ 468] Loss: 0.21046
+[2024-06-24T05:15:08.426] Epoch: [2/3] Batch: [ 451/ 468] Loss: 0.08205
+[2024-06-24T05:15:11.754] Epoch: [2/3] Accuracy: 96.74479%
+[2024-06-24T05:15:11.794] Epoch: [3/3] Batch: [   1/ 468] Loss: 0.14564
+[2024-06-24T05:15:14.119] Epoch: [3/3] Batch: [  51/ 468] Loss: 0.07897
+[2024-06-24T05:15:16.624] Epoch: [3/3] Batch: [ 101/ 468] Loss: 0.12388
+[2024-06-24T05:15:19.215] Epoch: [3/3] Batch: [ 151/ 468] Loss: 0.09276
+[2024-06-24T05:15:21.804] Epoch: [3/3] Batch: [ 201/ 468] Loss: 0.10669
+[2024-06-24T05:15:24.382] Epoch: [3/3] Batch: [ 251/ 468] Loss: 0.10244
+[2024-06-24T05:15:26.897] Epoch: [3/3] Batch: [ 301/ 468] Loss: 0.09365
+[2024-06-24T05:15:29.441] Epoch: [3/3] Batch: [ 351/ 468] Loss: 0.09794
+[2024-06-24T05:15:32.082] Epoch: [3/3] Batch: [ 401/ 468] Loss: 0.18681
+[2024-06-24T05:15:34.786] Epoch: [3/3] Batch: [ 451/ 468] Loss: 0.10596
+[2024-06-24T05:15:38.820] Epoch: [3/3] Accuracy: 96.88502%
+[2024-06-24T05:15:38.820] Training complete.
diff --git a/versions.js b/versions.js index c74ad69b..8565b8af 100644 --- a/versions.js +++ b/versions.js @@ -9,5 +9,5 @@ var DOC_VERSIONS = [ "v0.2", "dev", ]; -var DOCUMENTER_NEWEST = "v2.1.1"; +var DOCUMENTER_NEWEST = "v2.1.2"; var DOCUMENTER_STABLE = "stable";