WARNING: Method definition alg_autodiff(Any)

[dtxl]

Describe the bug 🐞

add DifferentialEquations

throws
? StochasticDiffEq
? DifferentialEquations
49 dependencies successfully precompiled in 64 seconds. 369 already precompiled.
2 dependencies failed but may be precompilable after restarting julia
2 dependencies had output during precompilation:
┌ DifferentialEquations
│ WARNING: Method definition alg_autodiff(Any) in module OrdinaryDiffEqDifferentiation at /Users/.../.julia/packages/OrdinaryDiffEqDifferentiation/OR1Bv/src/alg_utils.jl:17 overwritten in module StochasticDiffEq at /Users/.../.julia/packages/StochasticDiffEq/UhPmT/src/alg_utils.jl:27.
│ ERROR: Method overwriting is not permitted during Module precompilation. Use __precompile__(false) to opt-out of precompilation.
└
┌ StochasticDiffEq
│ WARNING: Method definition alg_autodiff(Any) in module OrdinaryDiffEqDifferentiation at /Users/.../.julia/packages/OrdinaryDiffEqDifferentiation/OR1Bv/src/alg_utils.jl:17 overwritten in module StochasticDiffEq at /Users/.../.julia/packages/StochasticDiffEq/UhPmT/src/alg_utils.jl:27.
│ ERROR: Method overwriting is not permitted during Module precompilation. Use __precompile__(false) to opt-out of precompilation.
└

Expected behavior

no error message while updating or adding packages

Minimal Reproducible Example 👇

as described above

Error & Stacktrace ⚠️

Environment (please complete the following information):

• Output of using Pkg; Pkg.status()

• Output of using Pkg; Pkg.status(; mode = PKGMODE_MANIFEST)

• Output of versioninfo()

Additional context

Add any other context about the problem here.

[dtxl]

Environment (please complete the following information):

• Output of using Pkg; Pkg.status()

Status `~/.julia/environments/v1.11/Project.toml`
  [093aae92] BSplineKit v0.17.7
  [336ed68f] CSV v0.10.15
⌅ [3da002f7] ColorTypes v0.11.5
⌅ [5ae59095] Colors v0.12.11
  [861a8166] Combinatorics v1.0.2
  [a8cc5b0e] Crayons v4.1.1
  [a93c6f00] DataFrames v1.7.0
  [8bb1440f] DelimitedFiles v1.9.1
  [0c46a032] DifferentialEquations v7.15.0
  [f6369f11] ForwardDiff v0.10.38
  [38e38edf] GLM v1.9.0
  [50e95529] GeoStatsSolvers v0.7.16
  [a98d9a8b] Interpolations v0.15.1
  [98e50ef6] JuliaFormatter v1.0.62
  [b964fa9f] LaTeXStrings v1.4.0
  [d3d80556] LineSearches v7.3.0
  [4345ca2d] Loess v0.6.4
  [429524aa] Optim v1.10.0
  [7f7a1694] Optimization v4.0.5
  [36348300] OptimizationOptimJL v0.4.1
  [bac558e1] OrderedCollections v1.7.0
  [1dea7af3] OrdinaryDiffEq v6.90.1
  [a03496cd] PlotlyBase v0.8.19
  [f0f68f2c] PlotlyJS v0.18.15
  [f2990250] PlotlyKaleido v2.2.5
  [91a5bcdd] Plots v1.40.9
  [274fc56d] PythonPlot v1.0.5
  [10745b16] Statistics v1.11.1
  [2913bbd2] StatsBase v0.34.3
  [f3b207a7] StatsPlots v0.15.7
  [bd369af6] Tables v1.12.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [9a3f8284] Random v1.11.0
  [1a1011a3] SharedArrays v1.11.0
Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated`

• Output of using Pkg; Pkg.status(; mode = PKGMODE_MANIFEST)

Status `~/.julia/environments/v1.11/Manifest.toml`
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  [764a87c0] BoundaryValueDiffEq v5.12.0
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  [ed55bfe0] BoundaryValueDiffEqShooting v1.2.0
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  [9a962f9c] DataAPI v1.16.0
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⌅ [6cb2f572] DataScienceTraits v0.2.1
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  [244e2a9f] DefineSingletons v0.1.2
  [bcd4f6db] DelayDiffEq v5.49.0
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⌅ [6b7a57c9] Expronicon v0.8.5
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  [c145ed77] GenericSchur v0.5.4
⌅ [323cb8eb] GeoStatsBase v0.42.1
⌅ [ad987403] GeoStatsModels v0.2.8
  [50e95529] GeoStatsSolvers v0.7.16
⌃ [e502b557] GeoTables v1.14.1
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  [cd3eb016] HTTP v1.10.14
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⌅ [30fc2ffe] LossFunctions v0.11.2
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⌅ [eacbb407] Meshes v0.37.5
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⌅ [8913a72c] NonlinearSolve v3.15.1
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  [a3f928ae] Fontconfig_jll v2.15.0+0
  [d7e528f0] FreeType2_jll v2.13.3+1
  [559328eb] FriBidi_jll v1.0.14+0
  [0656b61e] GLFW_jll v3.4.0+1
  [d2c73de3] GR_jll v0.73.9+0
  [78b55507] Gettext_jll v0.21.0+0
  [7746bdde] Glib_jll v2.82.2+1
  [3b182d85] Graphite2_jll v1.3.14+1
  [2e76f6c2] HarfBuzz_jll v8.5.0+0
  [1d5cc7b8] IntelOpenMP_jll v2024.2.1+0
  [aacddb02] JpegTurbo_jll v3.0.4+0
  [f7e6163d] Kaleido_jll v0.2.1+0
  [c1c5ebd0] LAME_jll v3.100.2+0
  [88015f11] LERC_jll v4.0.0+0
  [1d63c593] LLVMOpenMP_jll v18.1.7+0
  [dd4b983a] LZO_jll v2.10.2+1
  [81d17ec3] L_BFGS_B_jll v3.0.1+0
⌅ [e9f186c6] Libffi_jll v3.2.2+1
  [d4300ac3] Libgcrypt_jll v1.11.0+0
  [7e76a0d4] Libglvnd_jll v1.7.0+0
  [7add5ba3] Libgpg_error_jll v1.50.0+0
  [94ce4f54] Libiconv_jll v1.17.0+1
  [4b2f31a3] Libmount_jll v2.40.2+0
  [89763e89] Libtiff_jll v4.7.0+0
  [38a345b3] Libuuid_jll v2.40.2+0
  [856f044c] MKL_jll v2024.2.0+0
  [e7412a2a] Ogg_jll v1.3.5+1
  [458c3c95] OpenSSL_jll v3.0.15+1
  [efe28fd5] OpenSpecFun_jll v0.5.5+0
  [91d4177d] Opus_jll v1.3.3+0
  [36c8627f] Pango_jll v1.54.1+0
⌅ [30392449] Pixman_jll v0.43.4+0
  [c0090381] Qt6Base_jll v6.7.1+1
  [629bc702] Qt6Declarative_jll v6.7.1+2
  [ce943373] Qt6ShaderTools_jll v6.7.1+1
  [e99dba38] Qt6Wayland_jll v6.7.1+1
  [f50d1b31] Rmath_jll v0.5.1+0
⌅ [fb77eaff] Sundials_jll v5.2.3+0
  [a44049a8] Vulkan_Loader_jll v1.3.243+0
  [a2964d1f] Wayland_jll v1.21.0+1
  [2381bf8a] Wayland_protocols_jll v1.31.0+0
  [02c8fc9c] XML2_jll v2.13.5+0
  [aed1982a] XSLT_jll v1.1.42+0
  [ffd25f8a] XZ_jll v5.6.3+0
  [f67eecfb] Xorg_libICE_jll v1.1.1+0
  [c834827a] Xorg_libSM_jll v1.2.4+0
  [4f6342f7] Xorg_libX11_jll v1.8.6+1
  [0c0b7dd1] Xorg_libXau_jll v1.0.11+1
  [935fb764] Xorg_libXcursor_jll v1.2.0+4
  [a3789734] Xorg_libXdmcp_jll v1.1.4+1
  [1082639a] Xorg_libXext_jll v1.3.6+1
  [d091e8ba] Xorg_libXfixes_jll v5.0.3+4
  [a51aa0fd] Xorg_libXi_jll v1.7.10+4
  [d1454406] Xorg_libXinerama_jll v1.1.4+4
  [ec84b674] Xorg_libXrandr_jll v1.5.2+4
  [ea2f1a96] Xorg_libXrender_jll v0.9.11+0
  [14d82f49] Xorg_libpthread_stubs_jll v0.1.1+1
  [c7cfdc94] Xorg_libxcb_jll v1.17.0+1
  [cc61e674] Xorg_libxkbfile_jll v1.1.2+0
  [e920d4aa] Xorg_xcb_util_cursor_jll v0.1.4+0
  [12413925] Xorg_xcb_util_image_jll v0.4.0+1
  [2def613f] Xorg_xcb_util_jll v0.4.0+1
  [975044d2] Xorg_xcb_util_keysyms_jll v0.4.0+1
  [0d47668e] Xorg_xcb_util_renderutil_jll v0.3.9+1
  [c22f9ab0] Xorg_xcb_util_wm_jll v0.4.1+1
  [35661453] Xorg_xkbcomp_jll v1.4.6+0
  [33bec58e] Xorg_xkeyboard_config_jll v2.39.0+0
  [c5fb5394] Xorg_xtrans_jll v1.5.0+1
  [3161d3a3] Zstd_jll v1.5.6+1
  [35ca27e7] eudev_jll v3.2.9+0
  [214eeab7] fzf_jll v0.56.3+0
  [1a1c6b14] gperf_jll v3.1.1+1
  [a4ae2306] libaom_jll v3.9.0+0
  [0ac62f75] libass_jll v0.15.2+0
  [1183f4f0] libdecor_jll v0.2.2+0
  [2db6ffa8] libevdev_jll v1.11.0+0
  [f638f0a6] libfdk_aac_jll v2.0.3+0
  [36db933b] libinput_jll v1.18.0+0
  [b53b4c65] libpng_jll v1.6.44+0
  [f27f6e37] libvorbis_jll v1.3.7+2
  [f8abcde7] micromamba_jll v1.5.8+0
  [009596ad] mtdev_jll v1.1.6+0
  [1317d2d5] oneTBB_jll v2021.12.0+0
⌅ [1270edf5] x264_jll v2021.5.5+0
⌅ [dfaa095f] x265_jll v3.5.0+0
  [d8fb68d0] xkbcommon_jll v1.4.1+1
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.11.0
  [de0858da] Printf v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [1a1011a3] SharedArrays v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.11.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.7.2+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+0
  [14a3606d] MozillaCACerts_jll v2023.12.12
  [4536629a] OpenBLAS_jll v0.3.27+1
  [05823500] OpenLibm_jll v0.8.1+2
  [efcefdf7] PCRE2_jll v10.42.0+1
  [bea87d4a] SuiteSparse_jll v7.7.0+0
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.59.0+0
  [3f19e933] p7zip_jll v17.4.0+2
Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

• Output of versioninfo()

Julia Version 1.11.2
Commit 5e9a32e7af2 (2024-12-01 20:02 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: macOS (arm64-apple-darwin24.0.0)
  CPU: 16 × Apple M4 Max
  WORD_SIZE: 64
  LLVM: libLLVM-16.0.6 (ORCJIT, apple-m1)
Threads: 1 default, 0 interactive, 1 GC (on 12 virtual cores)

Additional context

does not happen on a linux machine

• Output of versioninfo()

Julia Version 1.11.2
Commit 5e9a32e7af2 (2024-12-01 20:02 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
  CPU: 12 × Intel(R) Xeon(R) CPU E5-2643 v4 @ 3.40GHz
  WORD_SIZE: 64
  LLVM: libLLVM-16.0.6 (ORCJIT, broadwell)
Threads: 1 default, 0 interactive, 1 GC (on 12 virtual cores)
Environment:
  LD_LIBRARY_PATH = /usr/lib64/VirtualGL:/usr/lib64/openmpi/lib64:/opt/cluster/spool/wsl/lib:

[ChrisRackauckas]

Sorry the bad release is now patched