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CUFF PRESSURE tab should display the counts of CUFF1 scans with pressure recorded #13

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psadil opened this issue Mar 8, 2024 · 1 comment

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@psadil
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psadil commented Mar 8, 2024

Over the boxplots on the CUFF PRESSURE tab, there are numbers written.

image

It seems like those numbers refer to the number of participants from each site/session, but I think it may be more informative to show the number of CUFF1 scans that have pressure recorded.

For example, here is a count of subject ids by visit and site in the imaging log as of this morning

site visit n
NS V1 237
NS V3 138
RU V1 1
SH V1 51
SH V3 37
UC V1 130
UC V3 76
UI V1 314
UI V3 217
UM V1 269
UM V3 184
WS V1 51
WS V3 31

Those numbers match the numbers in the cuff plot (well, almost e.g., SH V1 is off by one -- see #14)

Here are the counts broken down by whether CUFF1 is indicated (showing V1 only, for space)

site visit fMRI Individualized Pressure Indicated n
NS V1 FALSE 94
NS V1 TRUE 143
RU V1 TRUE 1
SH V1 FALSE 2
SH V1 TRUE 49
UC V1 FALSE 34
UC V1 TRUE 96
UI V1 FALSE 65
UI V1 TRUE 249
UM V1 FALSE 91
UM V1 TRUE 178
WS V1 FALSE 14
WS V1 TRUE 3

So, for example, of the 237 NS V1 participants, 94 do not have CUFF1 scan (fMRI Individualized Pressure Indicated == FALSE) and so shouldn't contribute data to the boxplot.

@psadil
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psadil commented Mar 12, 2024

FWIW, a change was made recently to how the imaging-log-latest.csv handles cases with where fMRI Individualized Pressure Indicated == FALSE, such that those cases now have "na" in the "Cuff1 Applied Pressure" column. I'm not sure how that will affect the counts and display

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