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🆕 Integrate Foundation Models Available VIA timm: UNI, Virchow, Hibou, H-optimus-0 #856

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🆕 Integrate Foundation Models Available VIA timm: UNI, Virchow, Hibou, H-optimus-0 #856

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Commits on Sep 2, 2024

  1. add _get_timm_architecture() and TimmBackbone

    @GeorgeBatch
    GeorgeBatch committed Sep 2, 2024
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Sep 2, 2024
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Commits on Sep 3, 2024

  1. inherit TimmBackbone from CNNBackbone 

    allows to reuse the `infer_batch` method of `CNNBackbone`
    @GeorgeBatch
    GeorgeBatch committed Sep 3, 2024
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  2. update link: change GitHub to HuggingDace for UNI model

    @GeorgeBatch
    GeorgeBatch committed Sep 3, 2024
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Commits on Sep 20, 2024

  1. Merge branch 'develop' into enhance-add-timm-feature-extractors

    @shaneahmed
    shaneahmed committed Sep 20, 2024
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Commits on Sep 24, 2024

  1. Merge branch 'TissueImageAnalytics:develop' into enhance-add-timm-fea… 

    …ture-extractors
    @GeorgeBatch
    GeorgeBatch committed Sep 24, 2024
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  2. Apply suggestions from code review: prov-gigapath version of timm 

    - remove explicit assert statement for `timm` version
- add `timm` version into in if statement for prov-gigapath
- add comment about `timm` version for timm-based models

Co-authored-by: Shan E Ahmed Raza <13048456+shaneahmed@users.noreply.github.com>
    @GeorgeBatch @shaneahmed
    GeorgeBatch and shaneahmed committed Sep 24, 2024
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  3. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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    pre-commit-ci[bot] committed Sep 24, 2024
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  4. remove explicit assert statement re prov-gigapath version of timm 

    was not removed while accepting suggested changes
    @GeorgeBatch
    GeorgeBatch committed Sep 24, 2024
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