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pytest.ini
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pytest.ini
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# pytest.ini
[pytest]
minversion = 5.0
addopts = -ra
filterwarnings =
ignore:.*Bio.Alphabet.*:PendingDeprecationWarning
ignore:.*deprecated in version 0.3.0*:DeprecationWarning
testpaths =
src/signalalign/tests/test_alignedsignal.py
src/signalalign/tests/test_banded_alignment.py
src/signalalign/tests/test_build_alignments.py
src/signalalign/tests/test_bwaWrapper.py
src/signalalign/tests/test_compare_trained_models.py
src/signalalign/tests/test_event_detection.py
src/signalalign/tests/test_fast5.py
src/signalalign/tests/test_filter_reads.py
src/signalalign/tests/test_hiddenMarkovModel.py
src/signalalign/tests/test_mea_algorithm.py
src/signalalign/tests/test_runSignalAlign.py
src/signalalign/tests/test_sequenceTools.py
src/signalalign/tests/test_signalAlignment.py
src/signalalign/tests/test_SingleNucleotideProbabilities.py
src/signalalign/tests/test_trainModels.py
src/signalalign/tests/test_variantcaller.py