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DESCRIPTION
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DESCRIPTION
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Package: RnaSeqTutorial
Title: RNA-Seq Tutorial
Version: 0.99.14
Date: 2020-11-20
Author: Nicolas Delhomme, Bastian Schiffthaler, Ismael Padioleau
Description: A tutorial package that describes the pre-processing of RNA-Seq
data - from the raw (FASTQ) data to the alignment (mapping) to a reference
genome - and its subsequent differential expression analysis at the gene
level.
Maintainer: Nicolas Delhomme <nicolas.delhomme@umu.se>
License: Artistic-2.0
Depends:
R (>= 3.5.1),
methods,
DESeq2,
gplots,
LSD,
RColorBrewer,
scatterplot3d,
tximport,
vsn,
VennDiagram
Imports:
BiocGenerics,
Biostrings,
graphics,
grDevices,
methods,
S4Vectors,
utils
Suggests:
knitr,
rmarkdown,
shiny,
BiocStyle
biocViews: ExperimentData, RNASeqData, Drosophila_melanogaster_Data,
ExpressionData
Packaged: 2015-10-17 16:37:01 UTC; bastian
NeedsCompilation: yes
RoxygenNote: 6.1.1
Encoding: UTF-8