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v1.2.0
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@shafferm shafferm released this 25 Feb 22:48
· 304 commits to master since this release
v1.2.0
4cbffa6

Change Log

  • Handle when there are no significant kofamhits
  • Fix DRAM genome stats to always give scaffold location even if grouping by other unit
  • Fix last genome being skipped when number of genomes was > genomes per liquor
  • Don't kill everything if bins aren't in gtdb or checkM, just give warning and fill
  • Add ability for DRAM and DRAM-v to take custom distillate sheets
  • Add flag to DRAM distill to give gene names and not counts in distillate
  • Fix where making gbk file would fail if '>' included in fasta header
  • Fix DRAM-v distill breaking at making viral stats with non VirSorter 1 viruses
  • Add flag to DRAM distill to set the number of genomes per liquor
  • Update default dbCAN2 version to v9
  • Metabolism updates
    • Remove database identifiers from polyphenolic metabolism that were too loose
    • Add sugar metabolisms to distillate
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