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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(column_missing_rate,Metabolite)
S3method(column_missing_rate,default)
S3method(filter_column_constant,Metabolite)
S3method(filter_column_constant,default)
S3method(filter_column_missing_rate,Metabolite)
S3method(filter_column_missing_rate,default)
S3method(filter_row_missing_rate,Metabolite)
S3method(filter_row_missing_rate,default)
S3method(impute,Metabolite)
S3method(impute,data.frame)
S3method(impute,default)
S3method(outlier_rate,Metabolite)
S3method(outlier_rate,data.frame)
S3method(outlier_rate,default)
S3method(replace_outlier,Metabolite)
S3method(replace_outlier,data.frame)
S3method(replace_outlier,default)
S3method(row_missing_rate,Metabolite)
S3method(row_missing_rate,default)
S3method(subset,Metabolite)
export("assayData<-")
export("featureData<-")
export("sampleData<-")
export(Metabolite)
export(Metabolite2maplet)
export(QC_pipeline)
export(QC_pipeline_df)
export(QCmatrix_norm)
export(RSD)
export(anno_hmdb)
export(batch_norm)
export(batch_norm_df)
export(bridge)
export(calculate_column_constant)
export(column_missing_rate)
export(correlation)
export(create_Metabolite)
export(filter_column_constant)
export(filter_column_missing_rate)
export(filter_row_missing_rate)
export(fit_cox)
export(fit_glmer)
export(fit_lm)
export(fit_lme)
export(fit_lmer)
export(fit_logistic)
export(fit_poisson)
export(genuMet_makefeature)
export(impute)
export(impute_kNN)
export(inverse_rank_transform)
export(is_outlier)
export(load_data)
export(load_excel)
export(maplet2Metabolite)
export(merge_data)
export(modelling_norm)
export(nearestQC_norm)
export(outlier_rate)
export(pareto_scale)
export(plot_Metabolite)
export(plot_PCA)
export(plot_QC)
export(plot_ROC)
export(plot_UMAP)
export(plot_injection_order)
export(plot_tsne)
export(plot_volcano)
export(regression)
export(regression_each)
export(regression_each_as_outcome)
export(replace_outlier)
export(row_missing_rate)
export(run_PCA)
export(save_data_txt)
export(save_data_xls)
export(subset)
export(transformation)
export(update_Metabolite)
exportClasses(Metabolite)
exportMethods("assayData<-")
exportMethods("featureData<-")
exportMethods("sampleData<-")
exportMethods(assayData)
exportMethods(featureData)
exportMethods(sampleData)
exportMethods(show)
import(data.table)
import(ggplot2)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,show)
importFrom(methods,validObject)
importFrom(plotROC,geom_roc)
importFrom(plotROC,melt_roc)
importFrom(plotROC,stat_roc)
importFrom(stats,as.formula)
importFrom(stats,binomial)
importFrom(stats,complete.cases)
importFrom(stats,cor.test)
importFrom(stats,glm)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,prcomp)
importFrom(stats,predict)
importFrom(stats,qnorm)
importFrom(stats,sd)
importFrom(utils,head)
importFrom(utils,setTxtProgressBar)
importFrom(utils,str)
importFrom(utils,txtProgressBar)