From 9d1fb6039b3e879b71378400bf73be95ea8476e2 Mon Sep 17 00:00:00 2001
From: joshuailevy <joshuailevy@users.noreply.github.com>
Date: Sun, 22 Dec 2024 01:40:30 +0000
Subject: [PATCH] updating barcodes and metadata

---
 freyja/data/last_barcode_update.txt |   2 +-
 freyja/data/lineage_mutations.json  |   8 ++++----
 freyja/data/usher_barcodes.feather  | Bin 4009842 -> 4009842 bytes
 3 files changed, 5 insertions(+), 5 deletions(-)

diff --git a/freyja/data/last_barcode_update.txt b/freyja/data/last_barcode_update.txt
index ea0a9de..f521b81 100644
--- a/freyja/data/last_barcode_update.txt
+++ b/freyja/data/last_barcode_update.txt
@@ -1 +1 @@
-12_21_2024-02-07
+12_22_2024-01-40
diff --git a/freyja/data/lineage_mutations.json b/freyja/data/lineage_mutations.json
index 3fccd5d..17dcd39 100644
--- a/freyja/data/lineage_mutations.json
+++ b/freyja/data/lineage_mutations.json
@@ -230340,7 +230340,7 @@
         "C28958A",
         "A29510C"
     ],
-    "KS.2": [
+    "KS.1": [
         "C241T",
         "T670G",
         "C897A",
@@ -230372,7 +230372,6 @@
         "T15756A",
         "C17410T",
         "A18163G",
-        "C18348T",
         "A18492G",
         "C18894T",
         "C19955T",
@@ -230411,6 +230410,7 @@
         "C22916T",
         "T22917G",
         "T22926C",
+        "T22928C",
         "T22942A",
         "G22992A",
         "C22995A",
@@ -230463,7 +230463,7 @@
         "C28958A",
         "A29510C"
     ],
-    "KS.1": [
+    "KS.2": [
         "C241T",
         "T670G",
         "C897A",
@@ -230495,6 +230495,7 @@
         "T15756A",
         "C17410T",
         "A18163G",
+        "C18348T",
         "A18492G",
         "C18894T",
         "C19955T",
@@ -230533,7 +230534,6 @@
         "C22916T",
         "T22917G",
         "T22926C",
-        "T22928C",
         "T22942A",
         "G22992A",
         "C22995A",
diff --git a/freyja/data/usher_barcodes.feather b/freyja/data/usher_barcodes.feather
index e5ade4d7a7ee5586e0771ee1164f0f35e10181d3..7415fb945313911abfc1b7bf17108c882de2f9f1 100644
GIT binary patch
delta 466
zcmXBIze^io9LMqRb3bxP8he)}K6=sA#F*4nJ-x)3RBaVe5Q9Moh0rb?GKqu#K|4Gp
zyUU3vDh^#NRkV4Qu2~EO>00QZbBjo+Q%gU^;l=yI=l1(Ab_?$W6N*rUCUoHwhVYAk
z2#N<HB)Y^yVG8R!d|<QP#-SaCM-YK1bjw4VSE}s2yxHK}a}n1qS2a?;s&3KA@32VG
zBDr_WOU%4uNhjx{Nq6<tv08QH)km(WMy|HB_*R?uexC4*K}SCFktO?1`3J?Mm%93!
z(S<TmcJexTmuEa0bZbj1e=YjP^76+SUuH^Bk;TtE!(wdOq5x5jv30sEIBsR(p5uC(
zW2tJR-Q>^%y<kHO`eeJ=pYGCU&6^j`z0-KY_V)Ey*!!f%>fY-=yzcE^^F+gF^+OyU
z!vOsMk}wD<7=kop;0X*%qm|tX#6y146bki{X;A^oTtk-0R7ejc8qH1?p27%>!WcL(
c4in%)4)QPw1(<>&l;9am!;EZpX1~1o2MLLz{r~^~

delta 465
zcmXBIyH8VL7{~GVIp;n06e)*tdG(Zw+*+;3E2jlouOz}rxCBB{27*gX7#K+S7Z@JX
zjlty*7?8<DA_VBWuriSl24)9bTr>t;9HjmX!zcOXd-e4<UBMa?TWqsrhwpHVU5;}d
z-{pEva07eXc$oa?(^h52PeKzkLkqN;9be6sh|RARwK3XS4yH>wH+|#KE_LhtCN&o>
zZL{@R6)AB|)*lLWFtb>rF>|@Ar0oU^;rM$w7eqhyR3?@zh{Rw)o7BGgWHned+j52I
zlU+K0P0{&*YKi9;!l@g(6lnAFKuwT!Ax-f}Whf=m_4H1N98p}H59?s|%`F{7s{_6B
zmD8$%dvG6oNI{!9t+uBV&XD*0br^N7XZ)x(nN3DtoYYeE_ODusw!f*aO6;T^I-nCC
z!2j0`J<tn%kcJFAghwWJlKl|xkgkxHkd4A~MTqjs;+1C!M=s-6s%Kev4E^u~20+78
c7=!?FkcS}{h7l-05uU+wcwwq%FOSRr0M~S<=>Px#