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<!DOCTYPE html>
<html lang="en">
<!-- Beautiful Jekyll | MIT license | Copyright Dean Attali 2016 -->
<head>
<meta charset="utf-8" />
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0, maximum-scale=1.0">
<title>Anupam Jamatia</title>
<meta name="author" content="Anupam Jamatia" />
<meta name="description" content="Assistant Professor | NLP Researcher">
<link rel="alternate" type="application/rss+xml" title=" - Assistant Professor, NLP Researcher" href="/feed.xml" />
<link rel="stylesheet" href="//maxcdn.bootstrapcdn.com/font-awesome/4.5.0/css/font-awesome.min.css" />
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<meta property="og:url" content="https://anupamjamatia.github.io/" />
<meta property="og:image" content="https://anupamjamatia.github.io/img/anupam.jpeg" />
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<body>
<nav class="navbar navbar-default navbar-fixed-top navbar-custom">
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<a href="/about-me">About Me</a>
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<a href="/publication">Publications</a>
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<a class="navlinks-parent" href="javascript:void(0)">Online</a>
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<a href="https://scholar.google.co.in/citations?user=laT3mwoAAAAJ&hl=en">Google Scholer</a>
<a href="https://orcid.org/0000-0001-6244-8626">orcid</a>
<a href="https://dblp.uni-trier.de/pers/hd/j/Jamatia:Anupam">dblp</a>
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</div>
<div class="avatar-container">
<div class="avatar-img-border">
<a href="https://anupamjamatia.github.io ">
<img class="avatar-img" src="/img/anupam.jpeg" />
</a>
</div>
</div>
</div>
</nav>
<!-- TODO this file has become a mess, refactor it -->
<header class="header-section ">
<div class="intro-header no-img">
<div class="container">
<div class="row">
<div class="col-lg-8 col-lg-offset-2 col-md-10 col-md-offset-1">
<div class="page-heading">
<h2>Anupam Jamatia, Ph.D</h2>
<hr class="small">
<span class="page-subheading">Assistant Professor | NLP Researcher</span>
</div>
</div>
</div>
</div>
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<div class="container" role="main">
<div class="row">
<div class="col-lg-8 col-lg-offset-2 col-md-10 col-md-offset-1">
<div style="text-align: justify">
I am working as an Assistant Professor in the Department of Computer Science and Engineering at National Institute of Technology, Agartala (NIT, Agartala), Tripura, India. My area of research interest includes all aspects of Natural Language Processing, Computational Linguistis, Language Technology, Text Processing, Computational Social Sciences.
</div>
<!--
<div class="posts-list">
<article class="post-preview">
<a href="/2017-07-25-tigmint/">
<h2 class="post-title">Tigmint</h2>
<h3 class="post-subtitle">
Correct Misassemblies Using Linked Reads From Large Molecules
</h3>
</a>
<p class="post-meta">
Posted on July 25, 2017
</p>
<div class="post-entry">
Tigmint identifies and corrects misassemblies using linked reads from 10x Genomics Chromium. The reads are first aligned to the assembly, and the extents of the large DNA molecules are inferred from the alignments of the reads. The physical coverage of the large molecules is more consistent and less prone to...
<a href="/2017-07-25-tigmint/" class="post-read-more">[Read More]</a>
</div>
</article>
<article class="post-preview">
<a href="/2016-08-08-abyss-2.0/">
<h2 class="post-title">ABySS 2.0</h2>
<h3 class="post-subtitle">
Resource-Efficient Assembly of Large Genomes using a Bloom Filter
</h3>
</a>
<p class="post-meta">
Posted on August 8, 2016
</p>
<div class="post-entry">
ABySS 1.0 was the first genome sequence assembly software capable of assembling a human genome using short read sequencing data. To aggregate enough memory to make that possible, multiple machines worked together in parallel and communicated using the message passing interface (MPI). ABySS 2.0, on the other hand, reduces the...
<a href="/2016-08-08-abyss-2.0/" class="post-read-more">[Read More]</a>
</div>
</article>
<article class="post-preview">
<a href="/2016-03-02-written-plan-of-living-cells/">
<h2 class="post-title">How to read the written plan of living cells</h2>
<h3 class="post-subtitle">
My research explained using only the ten hundred words used most often
</h3>
</a>
<p class="post-meta">
Posted on March 2, 2016
</p>
<div class="post-entry">
The written plan of living cells is very large. Computers read these plans, but they are not very good at it. They read lots of small little bits of the written plan at a time, and that makes lots of problems. I make a computer thing that takes the small...
<a href="/2016-03-02-written-plan-of-living-cells/" class="post-read-more">[Read More]</a>
</div>
</article>
<article class="post-preview">
<a href="/2016-03-01-linuxbrew/">
<h2 class="post-title">Linuxbrew and Homebrew-Science</h2>
<h3 class="post-subtitle">
The Homebrew package manager for Linux
</h3>
</a>
<p class="post-meta">
Posted on March 1, 2016
</p>
<div class="post-entry">
Linuxbrew is a package manager for Linux derived from Homebrew, the Mac OS package manager. It can be installed in your home directory and does not require root access. The same package manager can be used on both your Linux server and your Mac laptop. Installing a modern version of...
<a href="/2016-03-01-linuxbrew/" class="post-read-more">[Read More]</a>
</div>
</article>
<article class="post-preview">
<a href="/2016-02-15-r-and-make/">
<h2 class="post-title">Automating data-analysis pipelines using R and Make</h2>
<h3 class="post-subtitle">
Slides and a hands-on activity
</h3>
</a>
<p class="post-meta">
Posted on February 15, 2016
</p>
<div class="post-entry">
Slides and a hands-on activity ‘Automating’ comes from the roots ‘auto-‘ meaning ‘self-‘, and ‘mating’, meaning ‘screwing’. Bioinformatics analysis often involves designing a pipeline of commands and running that pipeline on many data sets. There are many ways to tackle this common task. Running commands interactively at the command line...
<a href="/2016-02-15-r-and-make/" class="post-read-more">[Read More]</a>
</div>
</article>
<article class="post-preview">
<a href="/2016-02-13-white-spruce-organelles/">
<h2 class="post-title">Organellar genomes of white spruce</h2>
<h3 class="post-subtitle">
The plastid and mitochondrial genomes of Picea glauca
</h3>
</a>
<p class="post-meta">
Posted on February 13, 2016
</p>
<div class="post-entry">
Chloroplast genomes of gymnosperms, including conifers, are well studied, but little is known about the mitochondria of gymnosperms. In fact, only a single gymnosperm mitochondrion is found in NCBI GenBank, and no conifer mitochondrion genomes are to be found at all, until now. Roughly one percent of the whole genome...
<a href="/2016-02-13-white-spruce-organelles/" class="post-read-more">[Read More]</a>
</div>
</article>
<article class="post-preview">
<a href="/2014-08-08-uniqtag/">
<h2 class="post-title">UniqTag</h2>
<h3 class="post-subtitle">
Abreviate gene sequences to unique and stable identifiers
</h3>
</a>
<p class="post-meta">
Posted on August 8, 2014
</p>
<div class="post-entry">
UniqTag is used to abbreviate gene sequences to unique and stable identifiers. It selects a representative k-mer from the sequence of each gene to be used as a systematic identifier for that gene. Unlike serial numbers, these identifiers are stable between different assemblies and annotations of the same data without...
<a href="/2014-08-08-uniqtag/" class="post-read-more">[Read More]</a>
</div>
</article>
<article class="post-preview">
<a href="/2014-07-13-white-spruce-genome/">
<h2 class="post-title">White spruce genome assembly</h2>
<h3 class="post-subtitle">
Assembly of a twenty gigabase genome using ABySS
</h3>
</a>
<p class="post-meta">
Posted on July 13, 2014
</p>
<div class="post-entry">
The SMarTForests project used ABySS to assemble the genome of white spruce (Picea glauca), which is twenty gigabases, seven times larger than the human genome. I also assembled and annotated the organellar genomes of white spruce, the chloroplast and mitochondrion.
<a href="/2014-07-13-white-spruce-genome/" class="post-read-more">[Read More]</a>
</div>
</article>
<article class="post-preview">
<a href="/2014-07-12-abyss/">
<h2 class="post-title">ABySS</h2>
<h3 class="post-subtitle">
Genome sequence assembler for large genomes
</h3>
</a>
<p class="post-meta">
Posted on July 12, 2014
</p>
<div class="post-entry">
ABySS is a genome sequence assembler that distributes the computation of large genome sequence assembly over a cluster of computers using MPI. ABySS was used assemble the twenty gigabase white spruce (Picea glauca) genome, seven times the size of the human genome.
<a href="/2014-07-12-abyss/" class="post-read-more">[Read More]</a>
</div>
</article>
</div>
-->
<!DOCTYPE html>
<html>
<head>
<meta name="viewport" content="width=device-width, initial-scale=1">
<style>
.alert {
padding: 20px;
background-color: #f44336;
color: white;
}
.closebtn {
margin-left: 15px;
color: white;
font-weight: bold;
float: right;
font-size: 22px;
line-height: 20px;
cursor: pointer;
transition: 0.3s;
}
.closebtn:hover {
color: black;
}
</style>
</head>
<body>
<!-- <h2>New Messages</h2> -->
<div class="alert">
<!-- <span class="closebtn" onclick="this.parentElement.style.display='none';">×</span> -->
<strong>New Messages!</strong>
🚀 Exciting Opportunity! 🚀 I am looking for passionate and dedicated full-time PhD students in the domains of Natural Language Processing, Text Processing, Language Technology, Computational Linguistics, Computational Social Sciences, and Social Computing. 🔍 For PhD admission details, visit the NIT Agartala website. https://www.nita.ac.in.
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<p class="copyright text-muted">
Anupam Jamatia
•
2019
•
<a href="https://anupamjamatia.github.io">anupamjamatia.github.io</a>
</p>
<!-- Please don't remove this, keep my open source work credited :) -->
<p class="theme-by text-muted">
Theme by
<a href="http://deanattali.com/beautiful-jekyll/">beautiful-jekyll</a> <br />
Last Modified: September 21, 2021 IST <br />
The content on this site is shared under a <a rel="license" href="https://creativecommons.org/licenses/by-sa/4.0/">CC BY-SA 4.0 license</a>, unless otherwise noted
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