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Table exception after enabling inline clustering #8667

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dineshbganesan opened this issue May 8, 2023 · 3 comments
Closed

Table exception after enabling inline clustering #8667

dineshbganesan opened this issue May 8, 2023 · 3 comments
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priority:major degraded perf; unable to move forward; potential bugs table-service

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@dineshbganesan
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Describe the problem you faced

I am facing an exception while writing updates to an hudi table. I think table is messed up after enabling the clustering. I can query and read the table but cannot write updates to the table. The job was running fine until I added the following configs.

The recent changes are:
'hoodie.clustering.inline': 'true',
'hoodie.clustering.inline.max.commits': 2,
'hoodie.clustering.execution.strategy.class': 'org.apache.hudi.client.clustering.run.strategy.SparkSortAndSizeExecutionStrategy',
'hoodie.parquet.max.file.size': 128 * 1024 * 1024,
'hoodie.parquet.small.file.limit': 100 * 1024 * 1024,
'hoodie.clustering.plan.strategy.max.num.groups': 1,
'hoodie.clustering.plan.strategy.target.file.max.bytes': 128 * 1024 * 1024,
'hoodie.clustering.plan.strategy.small.file.limit': 100 * 1024 * 1024

To Reproduce

Steps to reproduce the behavior:

  1. Create a new table using the Hudi Configs
  2. Publish inserts/updates to the source table
  3. Add configs related to clustering listed above
  4. Run the job to process inserts/updates

Expected behavior

We were hoping that Hudi would resize the files for better read performance. Instead it throws an exception posted in the stacktrace.

Environment Description

  • Hudi version : 0.12.1

  • Spark version : Spark 3.3

  • Storage (HDFS/S3/GCS..) : S3

  • Running on Docker? (yes/no) : no

Additional context

Complete Hudi Configuration:
Hoodie Configuration:'className': 'org.apache.hudi',
'hoodie.datasource.hive_sync.use_jdbc': 'false',
'hoodie.datasource.write.precombine.field': 'update_ts_dms',
'hoodie.datasource.write.recordkey.field': primaryKey,
'hoodie.table.name': tableName,
'hoodie.datasource.hive_sync.database': glueDbName,
'hoodie.datasource.hive_sync.table': tableName,
'hoodie.datasource.hive_sync.enable': 'true',
'hoodie.datasource.hive_sync.support_timestamp': 'true',
'hoodie.datasource.hive_sync.mode': 'hms',
'hoodie.schema.on.read.enable': 'true',
'hoodie.index.type': 'BLOOM',
'hoodie.metadata.enable': 'true',
'hoodie.datasource.meta_sync.condition.sync': 'true'
'hoodie.upsert.shuffle.parallelism': 200,
'hoodie.datasource.write.operation': 'upsert',
'hoodie.combine.before.insert': 'true',
'hoodie.cleaner.policy': 'KEEP_LATEST_COMMITS',
'hoodie.cleaner.commits.retained': 10
'hoodie.datasource.write.partitionpath.field': partitionKey,
'hoodie.datasource.hive_sync.partition_fields': partitionKey,
'hoodie.datasource.write.hive_style_partitioning': 'true',
'hoodie.datasource.hive_sync.partition_extractor_class': 'org.apache.hudi.hive.HiveStylePartitionValueExtractor',
'hoodie.datasource.write.keygenerator.consistent.logical.timestamp.enabled': 'true'

Clustering config: (Adding the following configs had caused the job to fail with exception. I tried to remove these configs and run the job but it fails with the same exception)

'hoodie.clustering.inline': 'true',
'hoodie.clustering.inline.max.commits': 2,
'hoodie.clustering.execution.strategy.class': 'org.apache.hudi.client.clustering.run.strategy.SparkSortAndSizeExecutionStrategy',
'hoodie.parquet.max.file.size': 128 * 1024 * 1024,
'hoodie.parquet.small.file.limit': 100 * 1024 * 1024,
'hoodie.clustering.plan.strategy.max.num.groups': 1,
'hoodie.clustering.plan.strategy.target.file.max.bytes': 128 * 1024 * 1024,
'hoodie.clustering.plan.strategy.small.file.limit': 100 * 1024 * 1024

Stacktrace

An error occurred while calling o1021.save.
: org.apache.spark.SparkException: Job aborted due to stage failure: Task 109 in stage 382.0 failed 4 times, most recent failure: Lost task 109.3 in stage 382.0 (TID 12069) (172.36.215.53 executor 13): org.apache.hudi.exception.HoodieUpsertException: Error upserting bucketType UPDATE for partition :109
at org.apache.hudi.table.action.commit.BaseSparkCommitActionExecutor.handleUpsertPartition(BaseSparkCommitActionExecutor.java:329)
at org.apache.hudi.table.action.commit.BaseSparkCommitActionExecutor.lambda$mapPartitionsAsRDD$a3ab3c4$1(BaseSparkCommitActionExecutor.java:244)
at org.apache.spark.api.java.JavaRDDLike.$anonfun$mapPartitionsWithIndex$1(JavaRDDLike.scala:102)
at org.apache.spark.api.java.JavaRDDLike.$anonfun$mapPartitionsWithIndex$1$adapted(JavaRDDLike.scala:102)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsWithIndex$2(RDD.scala:907)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsWithIndex$2$adapted(RDD.scala:907)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:365)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:329)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:365)
at org.apache.spark.rdd.RDD.$anonfun$getOrCompute$1(RDD.scala:378)
at org.apache.spark.storage.BlockManager.$anonfun$doPutIterator$1(BlockManager.scala:1525)
at org.apache.spark.storage.BlockManager.org$apache$spark$storage$BlockManager$$doPut(BlockManager.scala:1435)
at org.apache.spark.storage.BlockManager.doPutIterator(BlockManager.scala:1499)
at org.apache.spark.storage.BlockManager.getOrElseUpdate(BlockManager.scala:1322)
at org.apache.spark.rdd.RDD.getOrCompute(RDD.scala:376)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:327)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:365)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:329)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:138)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:548)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1516)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:551)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:750)
Caused by: org.apache.hudi.exception.HoodieException: org.apache.hudi.exception.HoodieException: java.util.concurrent.ExecutionException: org.apache.hudi.exception.HoodieException: operation has failed
at org.apache.hudi.table.action.commit.HoodieMergeHelper.runMerge(HoodieMergeHelper.java:149)
at org.apache.hudi.table.action.commit.BaseSparkCommitActionExecutor.handleUpdateInternal(BaseSparkCommitActionExecutor.java:358)
at org.apache.hudi.table.action.commit.BaseSparkCommitActionExecutor.handleUpdate(BaseSparkCommitActionExecutor.java:349)
at org.apache.hudi.table.action.commit.BaseSparkCommitActionExecutor.handleUpsertPartition(BaseSparkCommitActionExecutor.java:322)
... 28 more
Caused by: org.apache.hudi.exception.HoodieException: java.util.concurrent.ExecutionException: org.apache.hudi.exception.HoodieException: operation has failed
at org.apache.hudi.common.util.queue.BoundedInMemoryExecutor.execute(BoundedInMemoryExecutor.java:161)
at org.apache.hudi.table.action.commit.HoodieMergeHelper.runMerge(HoodieMergeHelper.java:147)
... 31 more
Caused by: java.util.concurrent.ExecutionException: org.apache.hudi.exception.HoodieException: operation has failed
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:192)
at org.apache.hudi.common.util.queue.BoundedInMemoryExecutor.execute(BoundedInMemoryExecutor.java:155)
... 32 more
Caused by: org.apache.hudi.exception.HoodieException: operation has failed
at org.apache.hudi.common.util.queue.BoundedInMemoryQueue.throwExceptionIfFailed(BoundedInMemoryQueue.java:248)
at org.apache.hudi.common.util.queue.BoundedInMemoryQueue.readNextRecord(BoundedInMemoryQueue.java:226)
at org.apache.hudi.common.util.queue.BoundedInMemoryQueue.access$100(BoundedInMemoryQueue.java:52)
at org.apache.hudi.common.util.queue.BoundedInMemoryQueue$QueueIterator.hasNext(BoundedInMemoryQueue.java:278)
at org.apache.hudi.common.util.queue.BoundedInMemoryQueueConsumer.consume(BoundedInMemoryQueueConsumer.java:36)
at org.apache.hudi.common.util.queue.BoundedInMemoryExecutor.lambda$null$2(BoundedInMemoryExecutor.java:135)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
... 3 more
Caused by: org.apache.hudi.exception.HoodieException: unable to read next record from parquet file
at org.apache.hudi.common.util.ParquetReaderIterator.hasNext(ParquetReaderIterator.java:53)
at org.apache.hudi.common.util.queue.IteratorBasedQueueProducer.produce(IteratorBasedQueueProducer.java:45)
at org.apache.hudi.common.util.queue.BoundedInMemoryExecutor.lambda$null$0(BoundedInMemoryExecutor.java:106)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
... 4 more
Caused by: org.apache.parquet.io.ParquetDecodingException: Can not read value at 0 in block -1 in file s3://datalake-curatedtestng/ccbmod/cisadm/ci_ft/table_name=CI_FT/3a6a1bb9-0ba2-485c-8c13-a4020259ee5d-1_4-552-3668_20230506151911182.parquet
at org.apache.parquet.hadoop.InternalParquetRecordReader.nextKeyValue(InternalParquetRecordReader.java:254)
at org.apache.parquet.hadoop.ParquetReader.read(ParquetReader.java:132)
at org.apache.parquet.hadoop.ParquetReader.read(ParquetReader.java:136)
at org.apache.hudi.common.util.ParquetReaderIterator.hasNext(ParquetReaderIterator.java:48)
... 8 more
Caused by: java.lang.UnsupportedOperationException: org.apache.parquet.column.values.dictionary.PlainValuesDictionary$PlainLongDictionary
at org.apache.parquet.column.Dictionary.decodeToBinary(Dictionary.java:41)
at org.apache.parquet.avro.AvroConverters$BinaryConverter.setDictionary(AvroConverters.java:77)
at org.apache.parquet.column.impl.ColumnReaderBase.(ColumnReaderBase.java:415)
at org.apache.parquet.column.impl.ColumnReaderImpl.(ColumnReaderImpl.java:46)
at org.apache.parquet.column.impl.ColumnReadStoreImpl.getColumnReader(ColumnReadStoreImpl.java:82)
at org.apache.parquet.io.RecordReaderImplementation.(RecordReaderImplementation.java:271)
at org.apache.parquet.io.MessageColumnIO$1.visit(MessageColumnIO.java:147)
at org.apache.parquet.io.MessageColumnIO$1.visit(MessageColumnIO.java:109)
at org.apache.parquet.filter2.compat.FilterCompat$NoOpFilter.accept(FilterCompat.java:177)
at org.apache.parquet.io.MessageColumnIO.getRecordReader(MessageColumnIO.java:109)
at org.apache.parquet.hadoop.InternalParquetRecordReader.checkRead(InternalParquetRecordReader.java:136)
at org.apache.parquet.hadoop.InternalParquetRecordReader.nextKeyValue(InternalParquetRecordReader.java:225)
... 11 more

Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.failJobAndIndependentStages(DAGScheduler.scala:2863)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2(DAGScheduler.scala:2799)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2$adapted(DAGScheduler.scala:2798)
at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:58)
at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:51)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:2798)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1(DAGScheduler.scala:1239)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1$adapted(DAGScheduler.scala:1239)
at scala.Option.foreach(Option.scala:257)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:1239)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:3051)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2993)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2982)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:1009)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2229)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2250)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2269)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2294)
at org.apache.spark.rdd.RDD.count(RDD.scala:1274)
at org.apache.hudi.HoodieSparkSqlWriter$.commitAndPerformPostOperations(HoodieSparkSqlWriter.scala:706)
at org.apache.hudi.HoodieSparkSqlWriter$.write(HoodieSparkSqlWriter.scala:340)
at org.apache.hudi.DefaultSource.createRelation(DefaultSource.scala:144)
at org.apache.spark.sql.execution.datasources.SaveIntoDataSourceCommand.run(SaveIntoDataSourceCommand.scala:45)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult$lzycompute(commands.scala:75)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult(commands.scala:73)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.executeCollect(commands.scala:84)
at org.apache.spark.sql.execution.QueryExecution$$anonfun$eagerlyExecuteCommands$1.$anonfun$applyOrElse$1(QueryExecution.scala:103)
at org.apache.spark.sql.catalyst.QueryPlanningTracker$.withTracker(QueryPlanningTracker.scala:107)
at org.apache.spark.sql.execution.SQLExecution$.withTracker(SQLExecution.scala:224)
at org.apache.spark.sql.execution.SQLExecution$.executeQuery$1(SQLExecution.scala:114)
at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$7(SQLExecution.scala:139)
at org.apache.spark.sql.catalyst.QueryPlanningTracker$.withTracker(QueryPlanningTracker.scala:107)
at org.apache.spark.sql.execution.SQLExecution$.withTracker(SQLExecution.scala:224)
at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$6(SQLExecution.scala:139)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:245)
at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$1(SQLExecution.scala:138)
at org.apache.spark.sql.SparkSession.withActive(SparkSession.scala:779)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:68)
at org.apache.spark.sql.execution.QueryExecution$$anonfun$eagerlyExecuteCommands$1.applyOrElse(QueryExecution.scala:100)
at org.apache.spark.sql.execution.QueryExecution$$anonfun$eagerlyExecuteCommands$1.applyOrElse(QueryExecution.scala:96)
at org.apache.spark.sql.catalyst.trees.TreeNode.$anonfun$transformDownWithPruning$1(TreeNode.scala:615)
at org.apache.spark.sql.catalyst.trees.CurrentOrigin$.withOrigin(TreeNode.scala:177)
at org.apache.spark.sql.catalyst.trees.TreeNode.transformDownWithPruning(TreeNode.scala:615)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.org$apache$spark$sql$catalyst$plans$logical$AnalysisHelper$$super$transformDownWithPruning(LogicalPlan.scala:30)
at org.apache.spark.sql.catalyst.plans.logical.AnalysisHelper.transformDownWithPruning(AnalysisHelper.scala:267)
at org.apache.spark.sql.catalyst.plans.logical.AnalysisHelper.transformDownWithPruning$(AnalysisHelper.scala:263)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.transformDownWithPruning(LogicalPlan.scala:30)
at org.apache.spark.sql.catalyst.plans.logical.LogicalPlan.transformDownWithPruning(LogicalPlan.scala:30)
at org.apache.spark.sql.catalyst.trees.TreeNode.transformDown(TreeNode.scala:591)
at org.apache.spark.sql.execution.QueryExecution.eagerlyExecuteCommands(QueryExecution.scala:96)
at org.apache.spark.sql.execution.QueryExecution.commandExecuted$lzycompute(QueryExecution.scala:83)
at org.apache.spark.sql.execution.QueryExecution.commandExecuted(QueryExecution.scala:81)
at org.apache.spark.sql.execution.QueryExecution.assertCommandExecuted(QueryExecution.scala:124)
at org.apache.spark.sql.DataFrameWriter.runCommand(DataFrameWriter.scala:860)
at org.apache.spark.sql.DataFrameWriter.saveToV1Source(DataFrameWriter.scala:390)
at org.apache.spark.sql.DataFrameWriter.saveInternal(DataFrameWriter.scala:363)
at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:239)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:282)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.ClientServerConnection.waitForCommands(ClientServerConnection.java:182)
at py4j.ClientServerConnection.run(ClientServerConnection.java:106)
at java.lang.Thread.run(Thread.java:750)
Caused by: org.apache.hudi.exception.HoodieUpsertException: Error upserting bucketType UPDATE for partition :109
at org.apache.hudi.table.action.commit.BaseSparkCommitActionExecutor.handleUpsertPartition(BaseSparkCommitActionExecutor.java:329)
at org.apache.hudi.table.action.commit.BaseSparkCommitActionExecutor.lambda$mapPartitionsAsRDD$a3ab3c4$1(BaseSparkCommitActionExecutor.java:244)
at org.apache.spark.api.java.JavaRDDLike.$anonfun$mapPartitionsWithIndex$1(JavaRDDLike.scala:102)
at org.apache.spark.api.java.JavaRDDLike.$anonfun$mapPartitionsWithIndex$1$adapted(JavaRDDLike.scala:102)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsWithIndex$2(RDD.scala:907)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsWithIndex$2$adapted(RDD.scala:907)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:365)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:329)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:365)
at org.apache.spark.rdd.RDD.$anonfun$getOrCompute$1(RDD.scala:378)
at org.apache.spark.storage.BlockManager.$anonfun$doPutIterator$1(BlockManager.scala:1525)
at org.apache.spark.storage.BlockManager.org$apache$spark$storage$BlockManager$$doPut(BlockManager.scala:1435)
at org.apache.spark.storage.BlockManager.doPutIterator(BlockManager.scala:1499)
at org.apache.spark.storage.BlockManager.getOrElseUpdate(BlockManager.scala:1322)
at org.apache.spark.rdd.RDD.getOrCompute(RDD.scala:376)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:327)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:365)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:329)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:138)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:548)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1516)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:551)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Caused by: org.apache.hudi.exception.HoodieException: org.apache.hudi.exception.HoodieException: java.util.concurrent.ExecutionException: org.apache.hudi.exception.HoodieException: operation has failed
at org.apache.hudi.table.action.commit.HoodieMergeHelper.runMerge(HoodieMergeHelper.java:149)
at org.apache.hudi.table.action.commit.BaseSparkCommitActionExecutor.handleUpdateInternal(BaseSparkCommitActionExecutor.java:358)
at org.apache.hudi.table.action.commit.BaseSparkCommitActionExecutor.handleUpdate(BaseSparkCommitActionExecutor.java:349)
at org.apache.hudi.table.action.commit.BaseSparkCommitActionExecutor.handleUpsertPartition(BaseSparkCommitActionExecutor.java:322)
... 28 more
Caused by: org.apache.hudi.exception.HoodieException: java.util.concurrent.ExecutionException: org.apache.hudi.exception.HoodieException: operation has failed
at org.apache.hudi.common.util.queue.BoundedInMemoryExecutor.execute(BoundedInMemoryExecutor.java:161)
at org.apache.hudi.table.action.commit.HoodieMergeHelper.runMerge(HoodieMergeHelper.java:147)
... 31 more
Caused by: java.util.concurrent.ExecutionException: org.apache.hudi.exception.HoodieException: operation has failed
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:192)
at org.apache.hudi.common.util.queue.BoundedInMemoryExecutor.execute(BoundedInMemoryExecutor.java:155)
... 32 more
Caused by: org.apache.hudi.exception.HoodieException: operation has failed
at org.apache.hudi.common.util.queue.BoundedInMemoryQueue.throwExceptionIfFailed(BoundedInMemoryQueue.java:248)
at org.apache.hudi.common.util.queue.BoundedInMemoryQueue.readNextRecord(BoundedInMemoryQueue.java:226)
at org.apache.hudi.common.util.queue.BoundedInMemoryQueue.access$100(BoundedInMemoryQueue.java:52)
at org.apache.hudi.common.util.queue.BoundedInMemoryQueue$QueueIterator.hasNext(BoundedInMemoryQueue.java:278)
at org.apache.hudi.common.util.queue.BoundedInMemoryQueueConsumer.consume(BoundedInMemoryQueueConsumer.java:36)
at org.apache.hudi.common.util.queue.BoundedInMemoryExecutor.lambda$null$2(BoundedInMemoryExecutor.java:135)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
... 3 more
Caused by: org.apache.hudi.exception.HoodieException: unable to read next record from parquet file
at org.apache.hudi.common.util.ParquetReaderIterator.hasNext(ParquetReaderIterator.java:53)
at org.apache.hudi.common.util.queue.IteratorBasedQueueProducer.produce(IteratorBasedQueueProducer.java:45)
at org.apache.hudi.common.util.queue.BoundedInMemoryExecutor.lambda$null$0(BoundedInMemoryExecutor.java:106)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
... 4 more
Caused by: org.apache.parquet.io.ParquetDecodingException: Can not read value at 0 in block -1 in file s3://datalake-curatedtestng/ccbmod/cisadm/ci_ft/table_name=CI_FT/3a6a1bb9-0ba2-485c-8c13-a4020259ee5d-1_4-552-3668_20230506151911182.parquet
at org.apache.parquet.hadoop.InternalParquetRecordReader.nextKeyValue(InternalParquetRecordReader.java:254)
at org.apache.parquet.hadoop.ParquetReader.read(ParquetReader.java:132)
at org.apache.parquet.hadoop.ParquetReader.read(ParquetReader.java:136)
at org.apache.hudi.common.util.ParquetReaderIterator.hasNext(ParquetReaderIterator.java:48)
... 8 more
Caused by: java.lang.UnsupportedOperationException: org.apache.parquet.column.values.dictionary.PlainValuesDictionary$PlainLongDictionary
at org.apache.parquet.column.Dictionary.decodeToBinary(Dictionary.java:41)
at org.apache.parquet.avro.AvroConverters$BinaryConverter.setDictionary(AvroConverters.java:77)
at org.apache.parquet.column.impl.ColumnReaderBase.(ColumnReaderBase.java:415)
at org.apache.parquet.column.impl.ColumnReaderImpl.(ColumnReaderImpl.java:46)
at org.apache.parquet.column.impl.ColumnReadStoreImpl.getColumnReader(ColumnReadStoreImpl.java:82)
at org.apache.parquet.io.RecordReaderImplementation.(RecordReaderImplementation.java:271)
at org.apache.parquet.io.MessageColumnIO$1.visit(MessageColumnIO.java:147)
at org.apache.parquet.io.MessageColumnIO$1.visit(MessageColumnIO.java:109)
at org.apache.parquet.filter2.compat.FilterCompat$NoOpFilter.accept(FilterCompat.java:177)
at org.apache.parquet.io.MessageColumnIO.getRecordReader(MessageColumnIO.java:109)
at org.apache.parquet.hadoop.InternalParquetRecordReader.checkRead(InternalParquetRecordReader.java:136)
at org.apache.parquet.hadoop.InternalParquetRecordReader.nextKeyValue(InternalParquetRecordReader.java:225)
... 11 more

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@ad1happy2go
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@dineshbganesan This is known issue with spark 3.3 while using with hudi 0.12. Can you try with this patch - #5966

@github-project-automation github-project-automation bot moved this to ⏳ Awaiting Triage in Hudi Issue Support May 9, 2023
@codope codope added table-service priority:major degraded perf; unable to move forward; potential bugs labels May 9, 2023
@codope codope moved this from ⏳ Awaiting Triage to 👤 User Action in Hudi Issue Support May 9, 2023
@dineshbganesan
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@ad1happy2go I'm using AWS Glue job to process the data which comes with the default version 0.12.1. I am not sure how to use a patch with Glue job. Can you clarify?

The logs show 3 different exceptions:

  • org.apache.hudi.exception.HoodieUpsertException: Error upserting bucketType UPDATE for partition :109

  • org.apache.hudi.exception.HoodieException: unable to read next record from parquet file

  • org.apache.parquet.io.ParquetDecodingException: Can not read value at 0 in block -1 in file s3://datalake-curatedtestng/ccbmod/cisadm/ci_ft/table_name=CI_FT/3a6a1bb9-0ba2-485c-8c13-a4020259ee5d-1_4-552-3668_20230506151911182.parquet

Can you help me understand what's the root cause of these exceptions?

Regards,
Dinesh

@dineshbganesan
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It worked with the following configuration.

'hoodie.parquet.small.file.limit': 0,
'hoodie.clustering.inline': 'true',
'hoodie.clustering.inline.max.commits': 2,
'hoodie.clustering.plan.strategy.target.file.max.bytes': 128 * 1024 * 1024,
'hoodie.clustering.plan.strategy.small.file.limit': 100 * 1024 * 1024,
'hoodie.clustering.plan.strategy.sort.columns': primaryKey

@github-project-automation github-project-automation bot moved this from 👤 User Action to ✅ Done in Hudi Issue Support May 16, 2023
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@codope @ad1happy2go @dineshbganesan