diff --git a/docs/guides/defaults-and-configuration-options.ipynb b/docs/guides/defaults-and-configuration-options.ipynb
index 3fa497e260..2aa87afe24 100644
--- a/docs/guides/defaults-and-configuration-options.ipynb
+++ b/docs/guides/defaults-and-configuration-options.ipynb
@@ -168,7 +168,6 @@
     "- `backend` (Backend) - If this is set, the transpiler compiles the input circuit to this device. If any other option is set that impacts these settings, such as `coupling_map`, it overrides the settings from `backend`.\n",
     "- `target` (Target) - A backend transpiler target. Normally this is specified as part of the backend argument, but if you manually constructed a Target object, you can specify it here. This overrides the target from `backend`.\n",
     "- `backend_properties` (BackendProperties) - Properties returned by a QPU, including information on gate errors, readout errors, qubit coherence times, and so on. Find a QPU that provides this information by running `backend.properties()`.\n",
-    "- `instruction_durations` (List[Tuple[str, Iterable[int], float, Iterable[float], str]] | List[Tuple[str, Iterable[int], float, Iterable[float]]] | List[Tuple[str, Iterable[int], float, str]] | List[Tuple[str, Iterable[int], float]] | InstructionDurations) - Durations of instructions. Applicable only if `scheduling_method` is specified. The gate lengths defined in `backend.properties` are used by default. They are overwritten if `instruction_durations` is specified. The `instruction_durations` format must be as follows. The instruction_durations must be given as a list of tuples [(instruction_name, qubits, duration, unit), …]. | [(`cx`, [0, 1], 12.3, `ns`), (`u3`, [0], 4.56, `ns`)] | [(`cx`, [0, 1], 1000), (`u3`, [0], 300)]. If `unit` is omitted, the default is `dt`, which is a sample time depending on the QPU. If the time unit is `dt`, the duration must be an integer.\n",
     "- `timing_constraints` (Dict[str, int] | None) - An optional control hardware restriction on instruction time resolution. This information is provided by the QPU configuration. If the QPU doesn’t have any restriction on the instruction time allocation, `timing_constraints` is `None` and no adjustment is performed. A QPU might report a set of restrictions, namely:\n",
     "    - `granularity`: An integer value representing the minimum pulse gate resolution in units of dt. A user-defined pulse gate should have a duration that is a multiple of this granularity value.\n",
     "    - `min_length`: An integer value representing the minimum pulse gate length in units of dt. A user-defined pulse gate should be longer than this length.\n",
@@ -263,24 +262,12 @@
    "cell_type": "code",
    "execution_count": 3,
    "id": "bcaab4a6",
-   "metadata": {
-    "tags": [
-     "ignore-warnings"
-    ]
-   },
+   "metadata": {},
    "outputs": [
-    {
-     "name": "stderr",
-     "output_type": "stream",
-     "text": [
-      "/tmp/ipykernel_1917/204530856.py:1: DeprecationWarning: ``qiskit.transpiler.preset_passmanagers.generate_preset_pass_manager.generate_preset_pass_manager()``'s argument ``instruction_durations`` is deprecated as of Qiskit 1.3. It will be removed in Qiskit 2.0. The `target` parameter should be used instead. You can build a `Target` instance with defined instruction durations with `Target.from_configuration(..., instruction_durations=...)`\n",
-      "  generate_preset_pass_manager(\n"
-     ]
-    },
     {
      "data": {
       "text/plain": [
-       "<qiskit.transpiler.passmanager.StagedPassManager at 0x7fbbdd07a550>"
+       "<qiskit.transpiler.passmanager.StagedPassManager at 0x193c636b290>"
       ]
      },
      "execution_count": 3,
@@ -296,7 +283,6 @@
     "    basis_gates=None,\n",
     "    inst_map=None,\n",
     "    coupling_map=None,\n",
-    "    instruction_durations=None,\n",
     "    backend_properties=None,\n",
     "    timing_constraints=None,\n",
     "    initial_layout=None,\n",