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Behavioral scoring

A Python package for behavioral scoring of experimental data

Dependencies

The packages requires the following packages which can be installed via pip:

  • numpy
  • scipy
  • matplotlib
  • scikit-learn (aka sklearn)

Moreover, the annotation GUI requires some additional packages:

  • opencv (version 2 or 3)
  • tqdm
  • pyqt (PyQt4 or PyQt5)
  • click

Installation

Download the package and run "python setup.py install"

Remarks

The package still contains a number of custom data handling functions which will be replaced by more general input data classes quite soon.