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pyproject.toml
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pyproject.toml
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[build-system]
requires = ["setuptools>=61.0"]
build-backend = "setuptools.build_meta"
[project]
name = "topefind"
version = "0.0.1"
authors = [{ name = "Cristian Tudosie", email = "cristian.tudosie@bayer.com" }]
description = "Finding the interacting residues in antibodies with machine learning"
readme = "README.md"
requires-python = ">=3.10"
license = { file = "LICENSE" }
classifiers = [
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Topic :: Scientific/Engineering",
"Topic :: Scientific/Engineering :: Information Analysis",
"Topic :: Scientific/Engineering :: Bio-Informatics",
"Topic :: Utilities",
"Operating System :: Unix",
"Operating System :: MacOS",
]
dependencies = [
"pytest",
"pytest-cov",
]
[project.urls]
"Homepage" = "https://github.com/bayer-science-for-a-better-life/topefind-public"
"Bug Tracker" = "https://github.com/bayer-science-for-a-better-life/topefind-public/issues"
"Source" = "https://github.com/bayer-science-for-a-better-life/topefind-public"
[tool.setuptools.packages]
find = { namespaces = false }
[tool.ruff]
# Enable the pycodestyle (`E`) and Pyflakes (`F`) rules by default.
# Unlike Flake8, Ruff doesn't enable pycodestyle warnings (`W`) or
# McCabe complexity (`C901`) by default.
select = ["E", "F"]
ignore = []
# Allow autofix for all enabled rules (when `--fix`) is provided.
fixable = ["ALL"]
unfixable = []
exclude = [
".git",
".ruff_cache",
".svn",
".tox",
".venv",
"__pypackages__",
"_build",
"buck-out",
"build",
"dist",
"node_modules",
"venv",
"**/vendored/",
]
per-file-ignores = { }
dummy-variable-rgx = "^(_+|(_+[a-zA-Z0-9_]*[a-zA-Z0-9]+?))$"
target-version = "py310"
line-length = 120
show-source = true
[tool.pytest.ini_options]
addopts = [
"-v",
"-ra",
"--cov",
"--cov-report=term-missing",
"--ignore=topefind/vendored/",
"--ignore=topefind/exploration/",
"--ignore=examples/",
"--ignore=models/",
]