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DESCRIPTION
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DESCRIPTION
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Package: MixSIAR
Title: Bayesian Mixing Models in R
Version: 3.1.10.9000
Authors@R: c(
person("Brian", "Stock", email = "b1stock@ucsd.edu", role = c("cre","aut")),
person("Brice", "Semmens", email = "semmens@ucsd.edu", role = "aut"),
person("Eric", "Ward", role = "ctb"),
person("Andrew", "Parnell", role = "ctb"),
person("Andrew", "Jackson", role = "ctb"),
person("Donald", "Phillips", role = "ctb"))
Description: Creates and runs Bayesian mixing models to analyze
biological tracer data (i.e. stable isotopes, fatty acids), which estimate the
proportions of source (prey) contributions to a mixture (consumer). 'MixSIAR'
is not one model, but a framework that allows a user to create a mixing model
based on their data structure and research questions, via options for fixed/
random effects, source data types, priors, and error terms. 'MixSIAR' incorporates
several years of advances since 'MixSIR' and 'SIAR', and includes both GUI
(graphical user interface) and script versions.
Depends:
R (>= 3.4.0)
Imports:
ggplot2 (>= 2.2.1),
rjags (>= 4-6),
R2jags (>= 0.5-7),
MASS (>= 7.3),
RColorBrewer (>= 1.1),
reshape (>= 0.8.7),
reshape2 (>= 1.4.3),
lattice (>= 0.20-35),
MCMCpack (>= 1.4-2),
ggmcmc (>= 1.1),
coda (>= 0.19-1),
loo (>= 2.0.0),
bayesplot (>= 1.4.0)
Suggests:
gWidgets (>= 0.0-54),
gWidgetsRGtk2 (>= 0.0-86),
splancs (>= 2.01-40),
knitr,
rmarkdown,
testthat
SystemRequirements: JAGS (>= 4.1) for the script version, both JAGS and GTK+ for
the GUI version. For install instructions, see README file.
URL: https://github.com/brianstock/MixSIAR
BugReports: https://github.com/brianstock/MixSIAR/issues
License: GPL-3
LazyData: true
VignetteBuilder: knitr
RoxygenNote: 6.0.1