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main.yml
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name: bob-the-builder
# only run on pushes to main or pull requests
on:
push:
# push to any branch *
branches: '*'
pull_request:
branches: [ main ]
jobs:
lint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- uses: chartboost/ruff-action@v1
tests:
runs-on: ${{ matrix.os }}
timeout-minutes: 15
strategy:
fail-fast: false
matrix:
os:
- ubuntu-latest
- macos-latest
- windows-latest
python-version:
- '3.10'
- '3.11'
- '3.12'
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Pip install
run: pip install .
- name: Run tests
run: |
pip install pytest pytest-cov
pytest tests -s -v --cov=imgtools --cov-report xml:coverage-report/coverage.xml
- name: Upload coverage report artifact to be used by Codecov
# only upload if matrix.os is ubuntu-latest and matrix.python-version is 3.12
if: matrix.os == 'ubuntu-latest' && matrix.python-version == '3.12'
uses: actions/upload-artifact@v2
with:
name: coverage-report
path: coverage-report
codecov:
needs: tests
runs-on: ubuntu-latest
steps:
- name: Checkout code
uses: actions/checkout@v3
- name: Download coverage report artifact
uses: actions/download-artifact@v2
with:
name: coverage-report
path: coverage-report
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v3
with:
token: ${{ secrets.CODECOV_TOKEN }}
files: ./coverage-report/coverage.xml
fail_ci_if_error: true
verbose: true
name: codecov-umbrella
cd:
permissions:
contents: write
packages: write
issues: write
pull-requests: write
needs: [tests]
# if pulling to main, deploy to PyPI
if: github.ref == 'refs/heads/main'
# Set up operating system
runs-on: ubuntu-latest
outputs:
released: ${{ steps.release.outputs.released }}
version: ${{ steps.release.outputs.version }}
tag: ${{ steps.release.outputs.tag }}
# Define job steps
steps:
- name: Set up Python 3.12
uses: actions/setup-python@v2
with:
python-version: 3.12
- name: Check-out repository
uses: actions/checkout@v3
with:
fetch-depth: 0
- name: Python Semantic Release
id: release
uses: python-semantic-release/python-semantic-release@master
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
pip-squeak:
needs: cd
if: |
needs.cd.outputs.released == 'true' && github.ref == 'refs/heads/main'
runs-on: ubuntu-latest
steps:
- name: Checkout the code with tag # ${{ needs.cd.outputs.tag }}
uses: actions/checkout@v3
# with:
# ref: ${{ needs.cd.outputs.tag }}
- name: Set up Python 3.12
uses: actions/setup-python@v4
with:
python-version: 3.12
- name: Install Package Builder
run:
python3 -m pip install build
- name: Build package
run:
python3 -m build --sdist --wheel --outdir dist/
- name: Publish to PyPI
uses: pypa/gh-action-pypi-publish@release/v1
with:
verbose: true
user: ${{ secrets.pypi_token }}
password: ${{ secrets.pypi_api }}
does-the-pip-squeak:
needs: pip-squeak
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ubuntu-latest, macos-latest, windows-latest]
python-version: ["3.12", "3.11", "3.10"]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install using PyPi
run: |
pip install med-imagetools
# autopipeline
# pip install med-imagetools ==${{ needs.cd.outputs.version }}