From 985b4e04d8ce152d8384bd355962155faa7c1fc1 Mon Sep 17 00:00:00 2001 From: Stefan Appelhoff Date: Tue, 23 Jun 2020 11:22:25 +0200 Subject: [PATCH] clarify file formats in EEG, iEEG --- .../03-electroencephalography.md | 10 ++++++---- .../04-intracranial-electroencephalography.md | 14 ++++++++------ 2 files changed, 14 insertions(+), 10 deletions(-) diff --git a/src/04-modality-specific-files/03-electroencephalography.md b/src/04-modality-specific-files/03-electroencephalography.md index 0338934896..25bf0fdc82 100644 --- a/src/04-modality-specific-files/03-electroencephalography.md +++ b/src/04-modality-specific-files/03-electroencephalography.md @@ -34,15 +34,17 @@ The EEG community uses a variety of formats for storing raw data, and there is no single standard that all researchers agree on. For BIDS, EEG data MUST be stored in one of the following formats: -- [European data format](https://www.edfplus.info/) (`.edf`) +- [European data format](https://www.edfplus.info/) + (Each recording consisting of a `.edf` file) - [BrainVision Core Data Format](https://www.brainproducts.com/productdetails.php?id=21&tab=5) - (`.vhdr`, `.vmrk`, `.eeg`) by Brain Products GmbH + (Each recording consisting of a `.vhdr`, `.vmrk`, `.eeg` file triplet) - The format used by the MATLAB toolbox [EEGLAB](https://sccn.ucsd.edu/eeglab) - (`.set` and `.fdt` files) + (Each recording consisting of a `.set` file with an optional `.fdt` file) -- [Biosemi](https://www.biosemi.com/) data format (`.bdf`) +- [Biosemi](https://www.biosemi.com/) data format + (Each recording consisting of a `.bdf` file) It is RECOMMENDED to use the European data format, or the BrainVision data format. It is furthermore discouraged to use the other accepted formats over diff --git a/src/04-modality-specific-files/04-intracranial-electroencephalography.md b/src/04-modality-specific-files/04-intracranial-electroencephalography.md index 58e816b87e..6c31d55da4 100644 --- a/src/04-modality-specific-files/04-intracranial-electroencephalography.md +++ b/src/04-modality-specific-files/04-intracranial-electroencephalography.md @@ -31,18 +31,20 @@ The iEEG community uses a variety of formats for storing raw data, and there is no single standard that all researchers agree on. For BIDS, iEEG data MUST be stored in one of the following formats: -- [European Data Format](https://www.edfplus.info/) (`.edf`) +- [European Data Format](https://www.edfplus.info/) + (Each recording consisting of a `.edf` file) - [BrainVision Core Data Format](https://www.brainproducts.com/productdetails.php?id=21&tab=5) - (`.vhdr`, `.eeg`, `.vmrk`) by Brain Products GmbH + (Each recording consisting of a `.vhdr`, `.vmrk`, `.eeg` file triplet) - The format used by the MATLAB toolbox [EEGLAB](https://sccn.ucsd.edu/eeglab) - (`.set` and `.fdt` files) + (Each recording consisting of a `.set` file with an optional `.fdt` file) -- [Neurodata Without Borders](https://github.com/NeurodataWithoutBorders/pynwb) - (`.nwb`) +- [Neurodata Without Borders](https://nwb-schema.readthedocs.io) + (Each recording consisting of a `.nwb` file) -- [MEF3](http://msel.mayo.edu/codes.html) (`.mef`) +- [MEF3](https://msel.mayo.edu/files/codes/MEF%203%20Specification.pdf) + (Each recording consisting of a `.mefd` directory) It is RECOMMENDED to use the European data format, or the BrainVision data format. It is furthermore discouraged to use the other accepted formats over