Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

loadIndexed bam lazily throws Exception if index does not exist #1830

Closed
akmorrow13 opened this issue Dec 13, 2017 · 1 comment
Closed

loadIndexed bam lazily throws Exception if index does not exist #1830

akmorrow13 opened this issue Dec 13, 2017 · 1 comment
Milestone
0.24.0

Comments

@akmorrow13
Copy link
Contributor

If bai file is missing, an error will only occur when performing a collect on the underlying rdd. It would be nice to immediately throw and error if the index does not exist.
@akmorrow13 akmorrow13 mentioned this issue Dec 13, 2017
Merged
@fnothaft fnothaft added this to the 0.24.0 milestone Jan 9, 2018
@heuermh
Copy link
Member

heuermh commented Jan 9, 2018

Fixed by #1831

@heuermh heuermh closed this as completed Jan 9, 2018
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
0.24.0
Development

No branches or pull requests
3 participants
@heuermh @fnothaft @akmorrow13