pyproject.toml

[project]
name = "biocommons.eutils"
authors = [
  { name="biocommons contributors", email="biocommons-dev@googlegroups.com" },
]
description = "Python interface to NCBI's eutilities API"
readme = "README.rst"
license = { file="LICENSE.txt" }
requires-python = ">=3.10"
classifiers = [
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "License :: OSI Approved :: Apache Software License",
    "Operating System :: OS Independent",
]
dynamic = ["version"]
dependencies = [
    "lxml",
    "pytz",
    "requests",
]

[project.optional-dependencies]
dev = [
    "flake8",
    "ipython",
    "mock",
    "pre-commit~=3.4",
    "pytest",
    "pytest-cov",
    "restview",
    "ruff==0.4.4",
    "setuptools",
    "sphinx",
    "sphinx_rtd_theme",
    "tox",
    "vcrpy",
]

[project.urls]
"Homepage" = "https://github.com/biocommons/eutils"
"Bug Tracker" = "https://github.com/biocommons/eutils/issues"


[build-system]
requires = [
	 "setuptools >= 65.3",
   	 "setuptools_scm[toml] ~= 7.0"
	 ]
build-backend = "setuptools.build_meta"


[tool.setuptools]
include-package-data = true

[tool.setuptools.packages.find]
where = [
	"src",
]
exclude = [
	"__pycache__",
	"*.pyc",
]
namespaces = true

[tool.setuptools.package-data]
"*" = [
	"*.gz",
	"*.json",
	"*.yaml",
]


[tool.setuptools_scm]


# https://docs.pytest.org/en/6.2.x/customize.html#pyproject-toml
[tool.pytest.ini_options]
testpaths = [
    "src",
    "tests"
]
addopts = "--doctest-modules --cov-report=term-missing --cov=src"
doctest_optionflags = [
    "ALLOW_BYTES",
    "ALLOW_UNICODE",
    "ELLIPSIS",
    "IGNORE_EXCEPTION_DETAIL",
    "NORMALIZE_WHITESPACE",
]
markers = [
	"network: tests that require network connectivity",
	"slow: slow tests that should be run infrequently",
]

[tool.ruff]
src = ["src", "tests"]
line-length = 100