From ece6ad5d09ff5d2098d3f07db5e3c89223c57022 Mon Sep 17 00:00:00 2001 From: BiocondaBot <47040946+BiocondaBot@users.noreply.github.com> Date: Fri, 8 Nov 2024 18:09:18 +0000 Subject: [PATCH 1/3] Update thapbi-pict to 1.0.17 --- recipes/thapbi-pict/meta.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/recipes/thapbi-pict/meta.yaml b/recipes/thapbi-pict/meta.yaml index 1451e942c5aca..7ec5ba85107c6 100644 --- a/recipes/thapbi-pict/meta.yaml +++ b/recipes/thapbi-pict/meta.yaml @@ -1,5 +1,5 @@ {% set name = "thapbi-pict" %} -{% set version = "1.0.16" %} +{% set version = "1.0.17" %} package: name: "{{ name|lower }}" @@ -7,7 +7,7 @@ package: source: url: https://pypi.io/packages/source/{{ name[0] }}/{{ name | replace("-", "_") }}/{{ name | replace("-", "_") }}-{{ version }}.tar.gz - sha256: 85cf6d180db38166bb7ccd14af8c3813e2b3fa0d5026cac76bce8867492563f7 + sha256: 030f27b94f5390de58f1e5b227d7fd1de50e7a6b01bb0fafd2b4320bee7c87f8 build: noarch: python From 864bf2dcfaa2474340dbb45ba6afc7379694a465 Mon Sep 17 00:00:00 2001 From: Peter Cock Date: Fri, 8 Nov 2024 18:46:09 +0000 Subject: [PATCH 2/3] Now needs at least Python 3.10 Also bumped up the python dependencies as per upstream, but only to major.minor level (ignoring the revision here for flexibility when solving - should be fine). --- recipes/thapbi-pict/meta.yaml | 18 +++++++++--------- 1 file changed, 9 insertions(+), 9 deletions(-) diff --git a/recipes/thapbi-pict/meta.yaml b/recipes/thapbi-pict/meta.yaml index 7ec5ba85107c6..a526d38ddfb43 100644 --- a/recipes/thapbi-pict/meta.yaml +++ b/recipes/thapbi-pict/meta.yaml @@ -21,19 +21,19 @@ build: requirements: host: - pip - - python >=3.8 + - python >=3.10 run: # Python - biom-format >=2.1.14 - - biopython >=1.82 - - cutadapt >=4.0 - - matplotlib-base >=3.7 - - networkx >=2.4,!=2.8.3,!=2.8.4 - - pydot <3 - - python >=3.8 - - rapidfuzz >=2.4.0 + - biopython >=1.84 + - cutadapt >=4.9 + - matplotlib-base >=3.9 + - networkx >=3.4 + - pydot >=3.0 + - python >=3.10 + - rapidfuzz >=3.10 - sqlalchemy >=2.0 - - xlsxwriter + - xlsxwriter >=3.2 # Command line - blast - flash >=1.2.11 From 2bec33c30acc91f44de3253d9ee81da43b091d48 Mon Sep 17 00:00:00 2001 From: mencian Date: Mon, 11 Nov 2024 10:25:28 -0600 Subject: [PATCH 3/3] edit dependencies --- recipes/thapbi-pict/meta.yaml | 13 +++++++------ 1 file changed, 7 insertions(+), 6 deletions(-) diff --git a/recipes/thapbi-pict/meta.yaml b/recipes/thapbi-pict/meta.yaml index a526d38ddfb43..1d9c74e0bf53f 100644 --- a/recipes/thapbi-pict/meta.yaml +++ b/recipes/thapbi-pict/meta.yaml @@ -14,7 +14,7 @@ build: number: 0 entry_points: - thapbi_pict = thapbi_pict.__main__:main - script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed -vv " + script: "{{ PYTHON }} -m pip install . --no-deps --no-build-isolation --no-cache-dir -vvv" run_exports: - {{ pin_subpackage(name, max_pin="x") }} @@ -22,17 +22,18 @@ requirements: host: - pip - python >=3.10 + - setuptools run: # Python - biom-format >=2.1.14 - biopython >=1.84 - cutadapt >=4.9 - - matplotlib-base >=3.9 - - networkx >=3.4 - - pydot >=3.0 + - matplotlib-base >=3.9.2 + - networkx >=3.4.2 + - pydot >=3.0.1 - python >=3.10 - - rapidfuzz >=3.10 - - sqlalchemy >=2.0 + - rapidfuzz >=3.10.1 + - sqlalchemy >=2.0.36 - xlsxwriter >=3.2 # Command line - blast