From ece6ad5d09ff5d2098d3f07db5e3c89223c57022 Mon Sep 17 00:00:00 2001
From: BiocondaBot <47040946+BiocondaBot@users.noreply.github.com>
Date: Fri, 8 Nov 2024 18:09:18 +0000
Subject: [PATCH 1/3] Update thapbi-pict to 1.0.17
---
recipes/thapbi-pict/meta.yaml | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/recipes/thapbi-pict/meta.yaml b/recipes/thapbi-pict/meta.yaml
index 1451e942c5aca..7ec5ba85107c6 100644
--- a/recipes/thapbi-pict/meta.yaml
+++ b/recipes/thapbi-pict/meta.yaml
@@ -1,5 +1,5 @@
{% set name = "thapbi-pict" %}
-{% set version = "1.0.16" %}
+{% set version = "1.0.17" %}
package:
name: "{{ name|lower }}"
@@ -7,7 +7,7 @@ package:
source:
url: https://pypi.io/packages/source/{{ name[0] }}/{{ name | replace("-", "_") }}/{{ name | replace("-", "_") }}-{{ version }}.tar.gz
- sha256: 85cf6d180db38166bb7ccd14af8c3813e2b3fa0d5026cac76bce8867492563f7
+ sha256: 030f27b94f5390de58f1e5b227d7fd1de50e7a6b01bb0fafd2b4320bee7c87f8
build:
noarch: python
From 864bf2dcfaa2474340dbb45ba6afc7379694a465 Mon Sep 17 00:00:00 2001
From: Peter Cock
Date: Fri, 8 Nov 2024 18:46:09 +0000
Subject: [PATCH 2/3] Now needs at least Python 3.10
Also bumped up the python dependencies as per upstream, but only to major.minor level (ignoring the revision here for flexibility when solving - should be fine).
---
recipes/thapbi-pict/meta.yaml | 18 +++++++++---------
1 file changed, 9 insertions(+), 9 deletions(-)
diff --git a/recipes/thapbi-pict/meta.yaml b/recipes/thapbi-pict/meta.yaml
index 7ec5ba85107c6..a526d38ddfb43 100644
--- a/recipes/thapbi-pict/meta.yaml
+++ b/recipes/thapbi-pict/meta.yaml
@@ -21,19 +21,19 @@ build:
requirements:
host:
- pip
- - python >=3.8
+ - python >=3.10
run:
# Python
- biom-format >=2.1.14
- - biopython >=1.82
- - cutadapt >=4.0
- - matplotlib-base >=3.7
- - networkx >=2.4,!=2.8.3,!=2.8.4
- - pydot <3
- - python >=3.8
- - rapidfuzz >=2.4.0
+ - biopython >=1.84
+ - cutadapt >=4.9
+ - matplotlib-base >=3.9
+ - networkx >=3.4
+ - pydot >=3.0
+ - python >=3.10
+ - rapidfuzz >=3.10
- sqlalchemy >=2.0
- - xlsxwriter
+ - xlsxwriter >=3.2
# Command line
- blast
- flash >=1.2.11
From 2bec33c30acc91f44de3253d9ee81da43b091d48 Mon Sep 17 00:00:00 2001
From: mencian
Date: Mon, 11 Nov 2024 10:25:28 -0600
Subject: [PATCH 3/3] edit dependencies
---
recipes/thapbi-pict/meta.yaml | 13 +++++++------
1 file changed, 7 insertions(+), 6 deletions(-)
diff --git a/recipes/thapbi-pict/meta.yaml b/recipes/thapbi-pict/meta.yaml
index a526d38ddfb43..1d9c74e0bf53f 100644
--- a/recipes/thapbi-pict/meta.yaml
+++ b/recipes/thapbi-pict/meta.yaml
@@ -14,7 +14,7 @@ build:
number: 0
entry_points:
- thapbi_pict = thapbi_pict.__main__:main
- script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed -vv "
+ script: "{{ PYTHON }} -m pip install . --no-deps --no-build-isolation --no-cache-dir -vvv"
run_exports:
- {{ pin_subpackage(name, max_pin="x") }}
@@ -22,17 +22,18 @@ requirements:
host:
- pip
- python >=3.10
+ - setuptools
run:
# Python
- biom-format >=2.1.14
- biopython >=1.84
- cutadapt >=4.9
- - matplotlib-base >=3.9
- - networkx >=3.4
- - pydot >=3.0
+ - matplotlib-base >=3.9.2
+ - networkx >=3.4.2
+ - pydot >=3.0.1
- python >=3.10
- - rapidfuzz >=3.10
- - sqlalchemy >=2.0
+ - rapidfuzz >=3.10.1
+ - sqlalchemy >=2.0.36
- xlsxwriter >=3.2
# Command line
- blast