From 58885444bd86e8b421086f17f625b4f8128d4678 Mon Sep 17 00:00:00 2001
From: Gabriel Selzer <gjselzer@wisc.edu>
Date: Mon, 26 Jun 2023 11:32:21 -0500
Subject: [PATCH] Set thickness threshold based on input range (#332)

* Set threshold based on input maximum

* Take minimum into account for threshold
---
 .../main/java/org/bonej/wrapperPlugins/ThicknessWrapper.java   | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/Modern/wrapperPlugins/src/main/java/org/bonej/wrapperPlugins/ThicknessWrapper.java b/Modern/wrapperPlugins/src/main/java/org/bonej/wrapperPlugins/ThicknessWrapper.java
index d4bb6c70..94bd3d5b 100644
--- a/Modern/wrapperPlugins/src/main/java/org/bonej/wrapperPlugins/ThicknessWrapper.java
+++ b/Modern/wrapperPlugins/src/main/java/org/bonej/wrapperPlugins/ThicknessWrapper.java
@@ -39,6 +39,7 @@
 import static org.bonej.wrapperPlugins.wrapperUtils.Common.cancelMacroSafe;
 
 import ij.ImagePlus;
+import ij.process.ImageStatistics;
 import ij.process.LUT;
 import ij.process.StackStatistics;
 
@@ -207,6 +208,8 @@ private void prepareRun(final boolean foreground) {
 		this.foreground = foreground;
 		final String suffix = foreground ? "_Tb.Th" : "_Tb.Sp";
 		localThickness.setTitleSuffix(suffix);
+		ImageStatistics stats = inputImage.getStatistics();
+		localThickness.threshold = (int) (stats.min + stats.max + 1) / 2;
 		localThickness.inverse = !foreground;
 	}