forked from libqueso/queso
-
Notifications
You must be signed in to change notification settings - Fork 0
/
configure.ac
268 lines (209 loc) · 6.72 KB
/
configure.ac
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
# -*- Autoconf -*-
# Process this file with autoconf to produce a configure script.
AC_PREREQ(2.65)
AC_INIT([queso], [0.53.1], [queso-users@googlegroups.com])
PACKAGE_DESCRIPTION="The parallel C++ statistical library QUESO: Quantification of uncertainty for estimation, simulation and optimization"
AC_SUBST([PACKAGE_DESCRIPTION])
PACKAGE_URL="https://github.com/libqueso/queso"
AC_SUBST([PACKAGE_URL])
AC_CONFIG_MACRO_DIR([m4])
AC_CONFIG_HEADERS(config_queso.h.tmp)
dnl Prefixes everything in the temporary file with QUESO_
AX_PREFIX_CONFIG_H(config_queso.h,QUESO,config_queso.h.tmp)
AC_CONFIG_AUX_DIR([build-aux])
AC_CANONICAL_TARGET()
AM_INIT_AUTOMAKE([color-tests subdir-objects])
AM_SILENT_RULES(yes) # use silent rules where available - automake 1.11
# Release versioning
AX_SPLIT_VERSION
GENERIC_MAJOR_VERSION=$AX_MAJOR_VERSION
GENERIC_MINOR_VERSION=$AX_MINOR_VERSION
GENERIC_MICRO_VERSION=$AX_POINT_VERSION
# Generating a libtool library
GENERIC_RELEASE=$GENERIC_MAJOR_VERSION.$GENERIC_MINOR_VERSION
AC_SUBST(GENERIC_RELEASE)
AC_SUBST(GENERIC_MAJOR_VERSION)
AC_SUBST(GENERIC_MINOR_VERSION)
AC_SUBST(GENERIC_MICRO_VERSION)
LT_INIT
# Set default CFLAGS & CXXFLAGS IF the user hasn't specified anything
AC_MSG_CHECKING(if CFLAGS is set)
if test "x$CFLAGS" = "x"; then
CFLAGS="-g -O2 -Wall"
AC_MSG_RESULT(no... setting to -g -O2 -Wall)
else
AC_MSG_RESULT(yes)
fi
AC_MSG_CHECKING(if CXXFLAGS is set)
if test "x$CXXFLAGS" = "x"; then
CXXFLAGS="-g -O2 -Wall"
AC_MSG_RESULT(no... setting to -g -O2 -Wall)
else
AC_MSG_RESULT(yes)
fi
# Required for some macros
# AX_AM_MACROS
#-----------------------
# Check for debug mode?
#-----------------------
AC_MSG_CHECKING(whether to enable debugging)
debug_default="no"
AC_ARG_ENABLE(debug, [ --enable-debug=[no/yes] turn on debugging
[default=$debug_default]],, enable_debug=$debug_default)
if test "x$enable_debug" = "xyes"; then
CFLAGS="$CFLAGS -DDEBUG"
CXXFLAGS="$CXXFLAGS -DDEBUG"
AC_MSG_RESULT(yes)
else
AC_MSG_RESULT(no)
fi
#-------------------
# Compilers and MPI
#-------------------
AC_PROG_CC
AC_PROG_CXX
AC_PROG_FC
AC_LANG([C])
ACX_MPI([CC="$MPICC"], [AC_MSG_ERROR([Could not find MPI.])])
AC_LANG([C++])
ACX_MPI([CXX="$MPICXX"], [AC_MSG_ERROR([Could not find MPI.])])
#-------------------------
# External Library Checks
#-------------------------
# Check for Trilinos (optional)
#Kemelli: The lowest version used to be 8.0.7, now is 11.0.2, to accomodate the changes in -lteuchos*.
HAVE_TRILINOS=0
AX_TRILINOS_BASE(11.0.2,[HAVE_TRILINOS=1],[HAVE_TRILINOS=0])
if test "$HAVE_TRILINOS" = "1" ;then
#AX_TRILINOS_EPETRA([HAVE_TRILINOS=1],[HAVE_TRILINOS=0])
AX_TRILINOS_EPETRA([HAVE_TRILINOS=1],AC_MSG_ERROR([Could not find Epetra - which is required if Trilinos is enabled.]))
fi
AC_SUBST(HAVE_TRILINOS)
AM_CONDITIONAL(TRILINOS_ENABLED,test x$HAVE_TRILINOS = x1)
AC_CACHE_SAVE
# Check for libmesh (optional)
AX_PATH_LIBMESH_NEW(0.9.1,no)
AC_CACHE_SAVE
# Check for GSL (required)
AC_LANG([C])
AX_PATH_GSL(1.10,AM_CONDITIONAL([UQBT_GSL], [test 'TRUE']),AC_MSG_ERROR([Could not find required GSL version.]))
AC_CACHE_SAVE
# Check for boost (required)
AC_LANG([C++])
BOOST_REQUIRE([1.35])
BOOST_PROGRAM_OPTIONS
BOOST_FIND_HEADER([boost/scoped_ptr.hpp])
BOOST_FIND_HEADER([boost/shared_ptr.hpp])
AC_CACHE_SAVE
# Check for GLPK (optional)
AX_PATH_GLPK([4.35],[no])
# Check for HDF5 (optional)
AX_PATH_HDF5_NEW([1.8.0],[no])
# Check for ANN (external library)
# AX_PATH_ANN
#### TODO: Make sure that the ANN uses L-infinity (Max) norm
# Check for ANN feature
AX_ENABLE_ANN
# Check for libGRVY (optional as of QUESO version 0.46.0)
AX_PATH_GRVY_NEW([0.29],[no])
# Check for slepc
#AX_PATH_SLEPC_NEW([3.3],[no])
AC_CACHE_SAVE
#----------------
# Doxygen support
#----------------
DX_HTML_FEATURE(ON)
DX_CHM_FEATURE(OFF)
DX_CHI_FEATURE(OFF)
DX_MAN_FEATURE(OFF)
DX_RTF_FEATURE(OFF)
DX_XML_FEATURE(OFF)
DX_PDF_FEATURE(OFF)
DX_PS_FEATURE(OFF)
DX_INIT_DOXYGEN([queso],[doxygen/queso.dox],[docs])
#--------------------------
# Checks for code coverage
#-------------------------
AX_CODE_COVERAGE
# Query configuration environment
AX_SUMMARIZE_ENV
# Generate makefiles
AC_CONFIG_FILES([
queso.pc
queso-deps.pc
Makefile
inc/queso/Makefile
src/Makefile
src/contrib/ANN/Makefile
src/contrib/ANN/test/Makefile
src/core/inc/queso.h
examples/Makefile
examples/infinite_dim/inverse_options
examples/infinite_dim/parallel_inverse_options
test/Makefile
test/t01_valid_cycle/Makefile
test/t02_sip_sfp/Makefile
test/t03_sequence/Makefile
test/t04_bimodal/Makefile
test/gsl_tests/Makefile
test/gsl_tests/input
test/test_infinite/inf_options
test/test_Regression/GaussianMean1DRegression_options
test/test_Regression/gpmsa_cobra_input.txt
test/test_Regression/test_gpmsa_cobra_samples.m
test/test_Regression/ctf_dat.txt
test/test_Regression/dakota_pstudy.dat
test/test_StatisticalInverseProblem/both_input.txt
test/test_StatisticalInverseProblem/llhdout_input.txt
test/test_StatisticalInverseProblem/neither_input.txt
test/test_StatisticalInverseProblem/targetout_input.txt
test/test_Regression/jeffreys_input.txt
test/test_Regression/test_jeffreys_samples.m
test/test_Regression/adaptedcov_input.txt
test/test_gaussian_likelihoods/queso_input.txt
test/test_InterpolationSurrogate/queso_input.txt
doxygen/Makefile
doxygen/queso.dox
doxygen/txt_common/about_vpath.page
test/test_gaussian_likelihoods/gaussian_consistency_input.txt
test/test_InputOptionsParser/test_options_good.txt
test/test_InputOptionsParser/test_options_bad.txt
test/test_InputOptionsParser/test_options_default.txt
test/test_optimizer/input_test_optimizer_options
])
AC_CONFIG_FILES([test/test_Regression/test_cobra_samples_diff.sh
],
[
chmod +x test/test_Regression/test_cobra_samples_diff.sh
])
AC_CONFIG_FILES([
test/test_StatisticalInverseProblem/test_LlhdTargetOutput.sh
],
[
chmod +x test/test_StatisticalInverseProblem/test_LlhdTargetOutput.sh
])
AC_CONFIG_FILES([
test/test_Regression/test_jeffreys_samples_diff.sh
],
[
chmod +x test/test_Regression/test_jeffreys_samples_diff.sh
])
AC_CONFIG_FILES([
test/test_SequenceOfVectors/test_unifiedPositionsOfMaximum.sh
],
[
chmod +x test/test_SequenceOfVectors/test_unifiedPositionsOfMaximum.sh
])
dnl ----------------------------------------------
dnl Collect files for licence header stamping here
dnl ----------------------------------------------
_AC_SRCDIRS(.)
# We have to do this by subdirectory because otherwise distcheck breaks as we
# start picking up files in the directories that it uses
QUESO_STAMPED_FILES=$(find $ac_abs_top_srcdir/{src,examples,test} -name "*.h" -or -name "*.C" | tr "\n" " ")
AC_SUBST(QUESO_STAMPED_FILES)
AC_OUTPUT()
#---------------
# Final summary
#---------------
AX_SUMMARIZE_CONFIG