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Add validation for duplicate SAMPLE_IDs in time timeline #10917

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inodb opened this issue Jul 31, 2024 · 2 comments
Open

Add validation for duplicate SAMPLE_IDs in time timeline #10917

inodb opened this issue Jul 31, 2024 · 2 comments
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good first issue python Pull requests that update Python code

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@inodb
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inodb commented Jul 31, 2024

There can't be duplicate SAMPLE_IDs in the Sample Acquisition and Sequencing tracks:

image image

Let's add a check in the python validator to check for this in the timeline files

See:

https://genie.cbioportal.org/patient?studyId=crc_public_genie_bpc&caseId=GENIE-MSK-P-0021194

@inodb inodb added good first issue python Pull requests that update Python code labels Jul 31, 2024
@charanbhatia
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@inodb can you assign this issue to me?

@inodb
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inodb commented Aug 5, 2024

@charanbhatia feel free to work on it - thanks so much!

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