Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Sun, Claire Xin et al. Generation and multi-dimensional profiling of a childhood cancer cell line atlas defines new therapeutic opportunities. Cancer cell. 2023. #1808

Open
6 of 9 tasks
sbabyanusha opened this issue Apr 10, 2023 · 0 comments
Labels

Comments

@sbabyanusha
Copy link
Collaborator

sbabyanusha commented Apr 10, 2023

https://doi.org/10.1016/j.ccell.2023.03.007
Data Source : https://ccma.shinyapps.io/ccma/

  • create an issue on datahub before curating a study (one issue per study) and copy this checklist to the issue tracker
  • List information of the dataset/paper in the issue, e.g. pmid, paper link, suppl file link
  • Document the curation process, e.g. how and by whom the data was transformed
  • Follow checklist for a new study #248
  • Create a pull request to datahub once the data is curated
  • Push to triage portal
  • Import into msk and public portal database
  • Update the default quick select study list see options for selecting tcga + non-tcga studies cbioportal#5831 (only for studies that are not overlapping with existing ones; only for human tumors, not cell lines)
  • Update cBioPortal news
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

No branches or pull requests

2 participants