diff --git a/README.md b/README.md index 43d2be41..24f6db53 100644 --- a/README.md +++ b/README.md @@ -195,19 +195,13 @@ Here we zoom into parts of the architectural diagram to illustrate the Simulating from this model can be done like so. - si$simulator()$report() + (si$simulator()$report() + |> rename(prevalence = value) + |> ggplot() + + geom_line(aes(time, prevalence)) + ) - ## matrix time row col value - ## 2 I 1 0 0 1.247500 - ## 3 I 2 0 0 1.555484 - ## 4 I 3 0 0 1.938307 - ## 5 I 4 0 0 2.413491 - ## 6 I 5 0 0 3.002301 - ## 7 I 6 0 0 3.730342 - ## 8 I 7 0 0 4.628139 - ## 9 I 8 0 0 5.731624 - ## 10 I 9 0 0 7.082401 - ## 11 I 10 0 0 8.727601 +![](/Users/stevenwalker/Development/macpan2/README_files/figure-markdown_strict/unnamed-chunk-7-1.png) #### (2d) Calibrating Models in the TMB Engine