_pkgdown.yml

template:
  params:
    bootswatch: sandstone

reference:
- title: "Running the Zalpha functions"
  desc: >
    Use this function to run all the statistics automatically
- contents:
  - Zalpha_all
- title: "Create an LD profile"
  desc: >
    Use this function to create an LD profile. An LD profile is required if you want to adjust for expected LD.
- contents:
  - create_LDprofile
- title: "Zalpha functions"
  desc: >
    These are all the Zalpha functions.
- contents:
  - Zalpha
  - Zalpha_expected
  - Zalpha_rsq_over_expected
  - Zalpha_log_rsq_over_expected
  - Zalpha_Zscore
  - Zalpha_BetaCDF
- title: "Zbeta functions"
  desc: >
    These are all the Zbeta functions.
- contents:
  - Zbeta
  - Zbeta_expected
  - Zbeta_rsq_over_expected
  - Zbeta_log_rsq_over_expected
  - Zbeta_Zscore
  - Zbeta_BetaCDF
- title: "Diversity functions"
  desc: >
    These are the diversity functions.
- contents:
  - LR
  - L_plus_R
- title: "Example datasets"
  desc: >
    Two example datasets that come with the package.
- contents:
  - snps
  - LDprofile