README.md

sysSVM

Patient-specific cancer driver prediction using support vector machines and systems biology

Example data were imported using the following command

> install.packages("devtools")
> library(devtools)
> devtools::use_data(cgcs, cancerGenes, previous, gtex, geneInfo, geneProperties_mmImputed, false_positive_genes, oac_data, internal = TRUE)

Install

> install.packages("devtools")
> library(devtools)
> install_github("ciccalab/sysSVM")

Run test data

> library(sysSVM)
> options(stringsAsFactors = F)
> syssvm()